prot_L-elsbetiae_contig13518.2694.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13518.2694.1
Unique Nameprot_L-elsbetiae_contig13518.2694.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length56
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig13518.2694.1 vs. uniprot
Match: D7FTG3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTG3_ECTSI)

HSP 1 Score: 48.5 bits (114), Expect = 4.680e-5
Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 0 
Query:    1 MYGPRGEDEAIIGEAEAAAYSDLDSPSLEEIAESNQGGMD 40
            ++ PRGE+E +IG+ EAA  SD DS SLE+IA+SNQG MD
Sbjct:  794 IWSPRGEEEEVIGDDEAAD-SDPDSRSLEDIAQSNQGNMD 832
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13518.2694.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FTG3_ECTSI4.680e-562.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13518contigL-elsbetiae_contig13518:1905..2072 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13518.2694.1mRNA_L-elsbetiae_contig13518.2694.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13518 1255..2552 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13518.2694.1 ID=prot_L-elsbetiae_contig13518.2694.1|Name=mRNA_L-elsbetiae_contig13518.2694.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=56bp
MYGPRGEDEAIIGEAEAAAYSDLDSPSLEEIAESNQGGMDFGSCAWTLPN
AIRCV*
back to top