prot_L-elsbetiae_contig13500.2686.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13500.2686.1
Unique Nameprot_L-elsbetiae_contig13500.2686.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length490
Homology
BLAST of mRNA_L-elsbetiae_contig13500.2686.1 vs. uniprot
Match: A0A6H5JTZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTZ5_9PHAE)

HSP 1 Score: 667 bits (1721), Expect = 1.610e-229
Identity = 324/476 (68.07%), Postives = 388/476 (81.51%), Query Frame = 0
Query:   11 VACLLWGTGQATGAVIVQYEFSQDECRRGAAEDLAGGQRYFGDMILDNSTTSCLSGIGMERTSESPGSPGASSVGDTTVLREDLSRSASSPGQFSLELWLSIDRMPACDRYCTTPIVTIGERGVSIDDDCQENLGMMLTYWTGTGEFGARFQSTTRDTCEWFWPGAEQPAENMGNAMHVVFTVDREEFFGNPYAYFEWFINGTRVAWDLSQYVPPLTMMATWDSGFNLQILDWSRQFPSSFYREGPGIKIFFLAIHNETLNSTEVLSRYATRIRHSTPIVRNTTVDVAEDGENGDHYEEPEFYLQVFPHSELQLIPLDVYDSDNDPATPNFDY-TNPRVFVSALPYPGYLVNSSDEIIVHVPFEVFGEDGVFSVRYRPVLNDFSTNVTANDSVPYANFSFYATDEEDNTRSHTNATVSIYVYPKNDPPEALAASHVVYAGTRSNILPLEGIDRESFDNVYGAAIVESPTRGSLFQV 485
            +A LL GT Q+  AV++QYEFSQ+ECRRG   D+AGG R+FGD+ LDNST SCL G+G+ERTS SPGSPGASS+G+TT+LRE+L    SSPG FSLELWLS+  MPACD +CTTPIVTIGE   S+DDDCQ+NLGMM+TYWT TG+FGARF S   D CE  W GA QP+E+MG A+H+V T+D   F+G PYAYF W+INGTRVA DLS+ VPP TMM  WDS FN+Q+LDWSRQ PSSFY EGPGIKIF+LAIH+ETL+ TE++SRY+ R+ +STP+V +TT+ VAEDGE GDHYE+P+ YLQVFP SELQ++PLDVYDSDNDPATPN+D  T+PRVFV+ LP+ G LVNSS + I  VPFEV  + G F+VRYRP+LNDFSTN    DSV YANFSFYATD E  TRSHTNATVS+YV+ KNDPP+AL ASH V+AG+R N +PL G D ++FD+V+GAAIVE P RG+LFQV
Sbjct:    9 LAYLLGGTCQSNAAVLIQYEFSQEECRRGVVADVAGGNRFFGDLSLDNSTASCLPGVGIERTSASPGSPGASSIGNTTLLREELLNDDSSPGHFSLELWLSVPEMPACDGFCTTPIVTIGEGDTSLDDDCQQNLGMMITYWTETGDFGARFMSID-DECERLWSGAIQPSESMGYALHLVLTIDSIVFYGEPYAYFRWYINGTRVARDLSKDVPPETMMTLWDSDFNMQLLDWSRQIPSSFYTEGPGIKIFYLAIHDETLDVTEIVSRYSARVTNSTPVVSDTTIGVAEDGEEGDHYEDPQSYLQVFPVSELQMVPLDVYDSDNDPATPNYDNSTSPRVFVNTLPFLGSLVNSSGDDISSVPFEVLEDAGAFAVRYRPILNDFSTN----DSVVYANFSFYATDGESGTRSHTNATVSMYVFSKNDPPQALNASHGVFAGSRENFIPLNGTDMDAFDDVHGAAIVEPPARGTLFQV 479          
BLAST of mRNA_L-elsbetiae_contig13500.2686.1 vs. uniprot
Match: A0A835Z5G0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G0_9STRA)

HSP 1 Score: 112 bits (280), Expect = 6.870e-23
Identity = 78/235 (33.19%), Postives = 118/235 (50.21%), Query Frame = 0
Query:  260 IFFLAIHNETLNSTEVLSRYATRIRHSTPIVRNTTVDVAEDGENGDHYEEPEFYLQVFPHSELQLIPLDVYDSDNDPATPN----FDYTNPRV--FVSALPYPGYLVNSSDEIIVHVPFEVFGEDGVFSVRYRPVLNDFSTNVTANDSVPYANFSFYATDEEDNTRSHTNATVSIYVYPKNDPPEALAASHVVYAGTRS---NILPLEGIDRESFDNVYGAAIVESPTRGSLFQV 485
            ++  A++   L + E+ + +     ++ P V +    V EDGE GDHY+ PE+YL   P ++L ++ L  YD + D A  N    ++ +NP +  +V+A P  G L +S+   IV             +VRYRP  N+ S    A     YA F+FYA D     RS   AT ++YV  KNDPP A AA+  V A + +    +  + G D ++ D V  A +  +P RG LF V
Sbjct:  233 LYLAALYARALTAEEITANFKALWPNNAPSVADVAFTVNEDGEAGDHYDTPEYYLSAVPFADLAVLTLPAYDFEADAAANNVTAVYNASNPVIAYYVAAAPLAGTLYDSAGAAIVASLSTPPAALPSGAVRYRPAANESSAGGAA-----YAAFTFYAVDGA-GARSAGTATATLYVRAKNDPPAAAAAAFSVPASSAAAADTVFCVNGTDPDAGDAVTHAVLRSAPARGRLFAV 461          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13500.2686.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JTZ5_9PHAE1.610e-22968.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z5G0_9STRA6.870e-2333.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..489
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.526

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13500contigL-elsbetiae_contig13500:639..2108 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13500.2686.1mRNA_L-elsbetiae_contig13500.2686.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13500 580..2108 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13500.2686.1 ID=prot_L-elsbetiae_contig13500.2686.1|Name=mRNA_L-elsbetiae_contig13500.2686.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=490bp
MAGVMAERCAVACLLWGTGQATGAVIVQYEFSQDECRRGAAEDLAGGQRY
FGDMILDNSTTSCLSGIGMERTSESPGSPGASSVGDTTVLREDLSRSASS
PGQFSLELWLSIDRMPACDRYCTTPIVTIGERGVSIDDDCQENLGMMLTY
WTGTGEFGARFQSTTRDTCEWFWPGAEQPAENMGNAMHVVFTVDREEFFG
NPYAYFEWFINGTRVAWDLSQYVPPLTMMATWDSGFNLQILDWSRQFPSS
FYREGPGIKIFFLAIHNETLNSTEVLSRYATRIRHSTPIVRNTTVDVAED
GENGDHYEEPEFYLQVFPHSELQLIPLDVYDSDNDPATPNFDYTNPRVFV
SALPYPGYLVNSSDEIIVHVPFEVFGEDGVFSVRYRPVLNDFSTNVTAND
SVPYANFSFYATDEEDNTRSHTNATVSIYVYPKNDPPEALAASHVVYAGT
RSNILPLEGIDRESFDNVYGAAIVESPTRGSLFQVCRTR*
back to top