prot_L-elsbetiae_contig135.2682.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig135.2682.1
Unique Nameprot_L-elsbetiae_contig135.2682.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length148
Homology
BLAST of mRNA_L-elsbetiae_contig135.2682.1 vs. uniprot
Match: D7FHF7_ECTSI (40S ribosomal protein S12 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHF7_ECTSI)

HSP 1 Score: 260 bits (665), Expect = 1.470e-87
Identity = 129/135 (95.56%), Postives = 131/135 (97.04%), Query Frame = 0
Query:   13 VAETAAAEVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGAEGEATKIVPCSCAVVTDYGEQTQALSVLLEHLKKGGD 147
            V ET + EVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDC+NPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGAEGEATKIVPCSCAVVTDYGEQTQAL VLLEHLKKGGD
Sbjct:    7 VEETGSPEVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGAEGEATKIVPCSCAVVTDYGEQTQALGVLLEHLKKGGD 141          
BLAST of mRNA_L-elsbetiae_contig135.2682.1 vs. uniprot
Match: A0A835YYB7_9STRA (40S ribosomal protein S12 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYB7_9STRA)

HSP 1 Score: 223 bits (567), Expect = 1.460e-72
Identity = 110/145 (75.86%), Postives = 127/145 (87.59%), Query Frame = 0
Query:    8 MNGEVVAETAAAEV-----EVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGAEGEATKIVPCSCAVVTDYGEQTQALSVLLEHLKKGGD 147
            M+ E VAE  AA       +V E+SV DALKEVLKKALIFDGLRRGLHEC KALDRG+ARLCCLAKDCENPEYT+LVRALC+EG VH+IMV+TRQ+LGQWAGLCKI AEGEATK+VPCSCAVVTD+G ++ AL+VL+EHL+KGG+
Sbjct:    1 MSSEDVAEAPAAAAPAPAADVAELSVPDALKEVLKKALIFDGLRRGLHECVKALDRGTARLCCLAKDCENPEYTRLVRALCEEGGVHIIMVNTRQQLGQWAGLCKIDAEGEATKVVPCSCAVVTDFGTESPALTVLMEHLRKGGE 145          
BLAST of mRNA_L-elsbetiae_contig135.2682.1 vs. uniprot
Match: A0A7S2CVX4_9STRA (40S ribosomal protein S12 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CVX4_9STRA)

HSP 1 Score: 199 bits (505), Expect = 4.180e-63
Identity = 99/143 (69.23%), Postives = 120/143 (83.92%), Query Frame = 0
Query:    1 MVAEDVEMNGEVVAETAAAEVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGAEGEATKIVPCSCAVVTDYGEQTQALSVLLEHLK 143
            M  ED  M     AET   EVEV+E+ VLDALKEVLKKAL+ DGL RGLHECAKALD+ +A+LCCLAKDC+NPEYT+LVRALC+EG V+L+MVDT ++LG+W GLCKI  EGEATK+V CSCAV+T++GE++QAL+VLLE LK
Sbjct:    1 MAEEDAVMETAEAAETE--EVEVEEMGVLDALKEVLKKALVHDGLSRGLHECAKALDKHTAKLCCLAKDCDNPEYTKLVRALCEEGGVNLVMVDTGKQLGEWCGLCKIDEEGEATKVVRCSCAVITEFGEESQALNVLLEFLK 141          
BLAST of mRNA_L-elsbetiae_contig135.2682.1 vs. uniprot
Match: A0A7S2CD91_9STRA (40S ribosomal protein S12 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CD91_9STRA)

HSP 1 Score: 191 bits (486), Expect = 2.960e-60
Identity = 96/136 (70.59%), Postives = 115/136 (84.56%), Query Frame = 0
Query:   11 EVVAETAAAE--VEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGAEGEATKIVPCSCAVVTDYGEQTQALSVLLEHLKK 144
            EV+ E AA E  VEV+E+ VLDALKEVLKKAL+ DGLRRGLHE  KALDR SA+LCCLAKDC+NPEY +LVRALC+EG V+L+MV+T + LG+W GLCKI   GEA K+V CSCAVVT++GE+TQAL++LLE LKK
Sbjct:    5 EVMDEVAAEEPEVEVEEMGVLDALKEVLKKALVHDGLRRGLHEGVKALDRHSAKLCCLAKDCDNPEYNKLVRALCEEGGVNLVMVETGKTLGEWCGLCKIDENGEAVKVVRCSCAVVTEFGEETQALNILLEFLKK 140          
BLAST of mRNA_L-elsbetiae_contig135.2682.1 vs. uniprot
Match: A0A7S2LXQ0_9STRA (40S ribosomal protein S12 n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LXQ0_9STRA)

HSP 1 Score: 181 bits (460), Expect = 9.300e-56
Identity = 90/137 (65.69%), Postives = 110/137 (80.29%), Query Frame = 0
Query:   11 EVVAETAAAEVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGAEGEATKIVPCSCAVVTDYGEQTQALSVLLEHLKKGGD 147
            E+V      E EV E++VLDALKEVLKKAL+ DGLR+GLHECAKALDR SARLCCLAKDCEN EY +L+RALC EG V +IMVD+ ++LG W GL K+ A+GE  K V  SCAV+TD+GE+T+ALSVLL++L+K  D
Sbjct:   43 EIVDAVEEVEEEVAEMNVLDALKEVLKKALVHDGLRKGLHECAKALDRRSARLCCLAKDCENEEYKKLIRALCAEGEVSVIMVDSGKDLGAWCGLAKLDADGEVKKAVRTSCAVITDFGEETRALSVLLDYLQKQAD 179          
BLAST of mRNA_L-elsbetiae_contig135.2682.1 vs. uniprot
Match: K0T7T2_THAOC (40S ribosomal protein S12 n=2 Tax=Thalassiosira TaxID=35127 RepID=K0T7T2_THAOC)

HSP 1 Score: 180 bits (456), Expect = 1.060e-55
Identity = 87/126 (69.05%), Postives = 106/126 (84.13%), Query Frame = 0
Query:   22 EVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGAEGEATKIVPCSCAVVTDYGEQTQALSVLLEHLKKGGD 147
            EV E++VLDALKEVLKKALI DGLR+GLHECAKALDR SARLCCLAKDCEN EY +L+RALC EG V +IMVD+ ++LG W GL K+ A+GE  K V  SCAV+TD+GE+T+AL+VLL++L+K  D
Sbjct:   16 EVAEMNVLDALKEVLKKALIHDGLRKGLHECAKALDRRSARLCCLAKDCENEEYKKLIRALCAEGEVSVIMVDSGKDLGAWCGLAKLDADGEVKKAVRTSCAVITDFGEETRALTVLLDYLQKQSD 141          
BLAST of mRNA_L-elsbetiae_contig135.2682.1 vs. uniprot
Match: A0A7S1BMI5_9STRA (40S ribosomal protein S12 n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BMI5_9STRA)

HSP 1 Score: 176 bits (446), Expect = 3.090e-54
Identity = 86/124 (69.35%), Postives = 105/124 (84.68%), Query Frame = 0
Query:   21 VEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGAEGEATKIVPCSCAVVTDYGEQTQALSVLLEHLKK 144
            VE  E+SVLDALKEVLKKALI DGL++GLHECAKALD+ SARLCCLAKDCEN EY +L+RAL  EG+V+LIMVD+ +ELG W GL K+GA+ E  K V  SCAV+TD+GE+T AL++LL++LKK
Sbjct:   11 VETTEMSVLDALKEVLKKALIHDGLKKGLHECAKALDKRSARLCCLAKDCENEEYKKLIRALAAEGDVNLIMVDSGKELGTWCGLAKLGADLEVKKSVRTSCAVITDFGEETHALNILLDYLKK 134          
BLAST of mRNA_L-elsbetiae_contig135.2682.1 vs. uniprot
Match: A0A6T5YAX8_9STRA (40S ribosomal protein S12 n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A6T5YAX8_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.570e-53
Identity = 83/131 (63.36%), Postives = 106/131 (80.92%), Query Frame = 0
Query:   17 AAAEVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGAEGEATKIVPCSCAVVTDYGEQTQALSVLLEHLKKGGD 147
            A A VE  E+SVLDALKEVLKK+++ DGLR+GLHECAKALDR +ARLCCLAKDCEN EY +L+RALC EG VH++MV++ +ELG W GL K+  +G   K V  SCAV+TD+GE+T+AL++LL+ L+K  D
Sbjct:   11 APAVVEEVEMSVLDALKEVLKKSMVHDGLRKGLHECAKALDRRAARLCCLAKDCENEEYKKLIRALCAEGEVHVVMVESGKELGAWCGLAKLNDDGSVKKAVRTSCAVITDFGEETRALTILLDFLQKQAD 141          
BLAST of mRNA_L-elsbetiae_contig135.2682.1 vs. uniprot
Match: A0A8J2SJQ7_9STRA (40S ribosomal protein S12 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJQ7_9STRA)

HSP 1 Score: 174 bits (441), Expect = 2.520e-53
Identity = 86/127 (67.72%), Postives = 104/127 (81.89%), Query Frame = 0
Query:   17 AAAEVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGAEGEATKIVPCSCAVVTDYGEQTQALSVLLEHLK 143
            A  EVEV E+SVLDAL++VLK+ALI  GL+RGL E AKALD  +A+LCCLAKDC+N EY+ LVRALCDEG V L+MVD  ++LG+WAGLCKI  EGEAT +V CS A VT++GE T+ALSVLL +LK
Sbjct:   16 AEGEVEVAEMSVLDALRDVLKRALIHGGLKRGLREVAKALDSRTAKLCCLAKDCDNAEYSNLVRALCDEGGVSLVMVDEGKQLGEWAGLCKINEEGEATSVVRCSAACVTEFGEDTRALSVLLTYLK 142          
BLAST of mRNA_L-elsbetiae_contig135.2682.1 vs. uniprot
Match: G4ZQP8_PHYSP (40S ribosomal protein S12 n=15 Tax=Eukaryota TaxID=2759 RepID=G4ZQP8_PHYSP)

HSP 1 Score: 173 bits (439), Expect = 3.580e-53
Identity = 86/135 (63.70%), Postives = 110/135 (81.48%), Query Frame = 0
Query:   14 AETAAAEVEV-KEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGAEGEATKIVPCSCAVVTDYGEQTQALSVLLEHLKKGGD 147
            AE   AEVEV KE+  +DALKEVLKKALI DGL+RGLHE AKALD   ARLCCLA+DC+ P Y++LVRALC+E  V+LI+V + ++LG+W GLCKI + GEA K+V  SCAV+TD+GE+T AL+VLL++LK+ G+
Sbjct:    3 AEEVVAEVEVPKELGEMDALKEVLKKALIHDGLKRGLHEAAKALDSRRARLCCLAQDCDEPSYSKLVRALCEEHGVNLILVPSGKQLGEWCGLCKIDSLGEARKVVSTSCAVITDFGEETHALNVLLDYLKRQGE 137          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig135.2682.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHF7_ECTSI1.470e-8795.5640S ribosomal protein S12 n=2 Tax=Ectocarpus TaxID... [more]
A0A835YYB7_9STRA1.460e-7275.8640S ribosomal protein S12 n=1 Tax=Tribonema minus ... [more]
A0A7S2CVX4_9STRA4.180e-6369.2340S ribosomal protein S12 n=1 Tax=Florenciella par... [more]
A0A7S2CD91_9STRA2.960e-6070.5940S ribosomal protein S12 n=1 Tax=Dictyocha specul... [more]
A0A7S2LXQ0_9STRA9.300e-5665.6940S ribosomal protein S12 n=1 Tax=Skeletonema mari... [more]
K0T7T2_THAOC1.060e-5569.0540S ribosomal protein S12 n=2 Tax=Thalassiosira Ta... [more]
A0A7S1BMI5_9STRA3.090e-5469.3540S ribosomal protein S12 n=1 Tax=Corethron hystri... [more]
A0A6T5YAX8_9STRA1.570e-5363.3640S ribosomal protein S12 n=3 Tax=Bacillariophyta ... [more]
A0A8J2SJQ7_9STRA2.520e-5367.7240S ribosomal protein S12 n=1 Tax=Pelagomonas calc... [more]
G4ZQP8_PHYSP3.580e-5363.7040S ribosomal protein S12 n=15 Tax=Eukaryota TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000530Ribosomal protein S12ePRINTSPR00972RIBSOMALS12Ecoord: 49..65
score: 52.94
coord: 35..48
score: 68.18
coord: 115..128
score: 57.79
coord: 90..111
score: 52.07
IPR000530Ribosomal protein S12ePANTHERPTHR1184340S RIBOSOMAL PROTEIN S12coord: 12..144
IPR000530Ribosomal protein S12ePROSITEPS01189RIBOSOMAL_S12Ecoord: 31..49
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 30..124
e-value: 9.2E-24
score: 83.0
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 12..145
e-value: 1.0E-51
score: 175.7
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 28..143
NoneNo IPR availablePANTHERPTHR11843:SF040S RIBOSOMAL PROTEIN S12coord: 12..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig135contigL-elsbetiae_contig135:46152..48526 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig135.2682.1mRNA_L-elsbetiae_contig135.2682.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig135 45623..48539 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig135.2682.1 ID=prot_L-elsbetiae_contig135.2682.1|Name=mRNA_L-elsbetiae_contig135.2682.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=148bp
MVAEDVEMNGEVVAETAAAEVEVKEISVLDALKEVLKKALIFDGLRRGLH
ECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELG
QWAGLCKIGAEGEATKIVPCSCAVVTDYGEQTQALSVLLEHLKKGGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000530Ribosomal_S12e
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
IPR029064L30e-like