prot_L-elsbetiae_contig13469.2661.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13469.2661.1
Unique Nameprot_L-elsbetiae_contig13469.2661.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length293
Homology
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BLAST of mRNA_L-elsbetiae_contig13469.2661.1 vs. uniprot
Match: A0A6H5JB06_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JB06_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 9.060e-57
Identity = 154/291 (52.92%), Postives = 185/291 (63.57%), Query Frame = 0 
Query:   12 LAMVAIPTSPAEAFVNPPAAFPPPSAAWQRGRATAP----ASSLTPQAALASALFSGPGCPIAAAASERECAGARLRFTAGRERRHERFSSGLGSPLRSSPGGDSGTPESGDSXDEDPSDPVGDGPAGMPDNSQELREKLETIAANTPPPVVEGVAGG---LTKEEQEALEALXEDXXXXXXXERREAAMQAKSLNLYAYS-DEDDEEDPDAEK--YEEIIANMTKPLGITIEESTDRAKLVYITSVGEKAEAAGLQVGDVLTGASAVFGDAVWSVKEKSIAEIRSLVGCR 292
            LAM+A  T PAEAF  PPA    P ++W++ + T      AS  +P  A  +  FS    P A  ASER   GARLR   G++RR   FSS LG PLRSSP          D   +DPS        GM + S++LREKLETIA+ +      G  GG   LT++EQE L+ + ED       +R EAA +AKS++ +  S DEDD+   +AE   YEEIIANMTKPLGITIEESTD+AKLVYITSVG+KAEAAGLQVGDVLTG SAVFGD VWSV +K+I EIRSLV CR
Sbjct:   34 LAMLATSTLPAEAFFTPPAV---PPSSWKQQQDTVARTMMASFQSPTNAGVANSFS--RNPAAIDASER--GGARLRVERGQQRR---FSSSLGRPLRSSPS---------DGGSDDPSS------QGMSE-SEKLREKLETIASAS------GEGGGEDGLTQKEQEELDEMEEDRRVEAEVDRLEAAEKAKSMDAFRMSLDEDDDXXXNAEDEVYEEIIANMTKPLGITIEESTDKAKLVYITSVGDKAEAAGLQVGDVLTGVSAVFGDEVWSVNDKNIEEIRSLVRCR 292
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BLAST of mRNA_L-elsbetiae_contig13469.2661.1 vs. uniprot
Match: W7U9U3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U9U3_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.780e-9
Identity = 31/77 (40.26%), Postives = 53/77 (68.83%), Query Frame = 0 
Query:  217 KYEEIIANMTKPLGITIEESTDRAKLVYITSVGEKAEAAGLQVGDVLTGASAVFGDA-VWSVKEKSIAEIRSLVGCR 292
            ++EE + N++KPLG+ +EE+ D + +VY+    EKA+AAG++VGDV+ G S +F D+ + +V  K +  + SL+  R
Sbjct:   97 QFEEYVVNVSKPLGVAVEEAGDGSGMVYVVEANEKAQAAGVEVGDVIVGCSFIFDDSYLVNVTGKGVERVESLIRSR 173
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BLAST of mRNA_L-elsbetiae_contig13469.2661.1 vs. uniprot
Match: A0A7S1XUN2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUN2_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 2.300e-8
Identity = 35/81 (43.21%), Postives = 51/81 (62.96%), Query Frame = 0 
Query:  213 PDAEKYEEIIANMTKPLGITIEES-TDRAKLVYITSVGEKAEAAGLQVGDVLTGASAVFGDAVWSVKEKSIAEIRSLVGCR 292
            P+AE  E +   + +PLGI   ES   R   V +T  GEKA  AGL+VGD++TG S +FGD +W ++E  +A++R L+  R
Sbjct:   38 PEAE--EVLKVEIMRPLGIRAFESLAARVPTVVVTKAGEKAIEAGLEVGDIITGVSGIFGDDIWDIREGGLAKVRELIEFR 116
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BLAST of mRNA_L-elsbetiae_contig13469.2661.1 vs. uniprot
Match: A0A7S3JT56_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JT56_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 3.280e-8
Identity = 33/75 (44.00%), Postives = 46/75 (61.33%), Query Frame = 0 
Query:  218 YEEIIANMTKPLGITIEESTDRAKLVYITSVGEKAEAAGLQVGDVLTGASAVFGDAVWSVKEKSIAEIRSLVGCR 292
            YEE    + +PLG+ ++E+ D    VYI +    A AAG+Q GDV+T ASAVFGD +W V+   +  I SL+  R
Sbjct:   43 YEEYTVELQRPLGLRVQEALDGT--VYIVTSAGNAAAAGVQPGDVVTKASAVFGDDLWDVRSAGLKRIESLIRAR 115
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13469.2661.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JB06_9PHAE9.060e-5752.92PDZ domain-containing protein n=2 Tax=Ectocarpus T... [more]
W7U9U3_9STRA1.780e-940.26Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S1XUN2_9STRA2.300e-843.21Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3JT56_9STRA3.280e-844.00Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 167..197
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..292
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.669
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 220..264

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13469contigL-elsbetiae_contig13469:178..2674 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13469.2661.1mRNA_L-elsbetiae_contig13469.2661.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13469 178..2674 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13469.2661.1 ID=prot_L-elsbetiae_contig13469.2661.1|Name=mRNA_L-elsbetiae_contig13469.2661.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=293bp
RATAAAAVAITLAMVAIPTSPAEAFVNPPAAFPPPSAAWQRGRATAPASS
LTPQAALASALFSGPGCPIAAAASERECAGARLRFTAGRERRHERFSSGL
GSPLRSSPGGDSGTPESGDSGDEDPSDPVGDGPAGMPDNSQELREKLETI
AANTPPPVVEGVAGGLTKEEQEALEALEEDRRDQEEMERREAAMQAKSLN
LYAYSDEDDEEDPDAEKYEEIIANMTKPLGITIEESTDRAKLVYITSVGE
KAEAAGLQVGDVLTGASAVFGDAVWSVKEKSIAEIRSLVGCR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036034PDZ_sf