prot_L-elsbetiae_contig13447.2651.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13447.2651.1
Unique Nameprot_L-elsbetiae_contig13447.2651.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length102
Homology
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BLAST of mRNA_L-elsbetiae_contig13447.2651.1 vs. uniprot
Match: D7G0H3_ECTSI (Carbon catabolite repressor protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0H3_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 4.280e-21
Identity = 57/105 (54.29%), Postives = 63/105 (60.00%), Query Frame = 0 
Query:   12 SPEACGSTLETVSSRIWPPSLEQGVWPADYNISDHGSLTASFRVAPA---------TALPLPREEAGGRNGPSVS---VSAXXXXXXSS---AVEEDDDGHYGLR 101
            S +ACGSTLE  SSRIWPPSLEQG WP+DY +SDHGSLTASFRVAPA         +A    R    G +    S   +S       SS   A  EDDDGHYGLR
Sbjct:  442 SGDACGSTLEPTSSRIWPPSLEQGHWPSDYTMSDHGSLTASFRVAPAREGAALARGSAERQHRSAGTGESSEESSENVISGVLSEAVSSDGTAHHEDDDGHYGLR 546
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BLAST of mRNA_L-elsbetiae_contig13447.2651.1 vs. uniprot
Match: A0A6H5L7F0_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F0_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 1.150e-20
Identity = 54/105 (51.43%), Postives = 61/105 (58.10%), Query Frame = 0 
Query:   12 SPEACGSTLETVSSRIWPPSLEQGVWPADYNISDHGSLTASFRVAPA---------TALPLPREEAGGRNGPSVS------VSAXXXXXXSSAVEEDDDGHYGLR 101
            S +ACGSTLE  SSRIWPPSLEQG WP+DY +SDHGSLT SFRVAPA         +A    R    G +    S      V +       +A  EDDDGHYGLR
Sbjct:  488 SGDACGSTLEPASSRIWPPSLEQGHWPSDYTMSDHGSLTTSFRVAPAREGATLARVSAKQQHRSPGTGESSQENSETTIGSVLSEAMSFDGTAHHEDDDGHYGLR 592
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13447.2651.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0H3_ECTSI4.280e-2154.29Carbon catabolite repressor protein, putative n=1 ... [more]
A0A6H5L7F0_9PHAE1.150e-2051.43Endo/exonuclease/phosphatase domain-containing pro... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13447contigL-elsbetiae_contig13447:1499..3474 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13447.2651.1mRNA_L-elsbetiae_contig13447.2651.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13447 1499..3525 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13447.2651.1 ID=prot_L-elsbetiae_contig13447.2651.1|Name=mRNA_L-elsbetiae_contig13447.2651.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=102bp
GVSGEGRVACSSPEACGSTLETVSSRIWPPSLEQGVWPADYNISDHGSLT
ASFRVAPATALPLPREEAGGRNGPSVSVSAAAAVSVSSAVEEDDDGHYGL
R*
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