prot_L-elsbetiae_contig1343.2645.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1343.2645.1
Unique Nameprot_L-elsbetiae_contig1343.2645.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length276
Homology
BLAST of mRNA_L-elsbetiae_contig1343.2645.1 vs. uniprot
Match: D7G2K0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K0_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 5.370e-68
Identity = 135/224 (60.27%), Postives = 141/224 (62.95%), Query Frame = 0
Query:   57 MRWGLIPSFTKTDEKPDFFRMFNARSETAAEKPSFRRLVGRRHGVVAFTGFYEWKRDEKGERQPYYFRFADGRPLLFAVLYDTWQQG----DGFSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLLFSYAVLTTSAAPRLAWLHERMPVILRGPHDAAAWLGCKGAE 276
            MRWGL+PSFTK  +KPDFFRMFNARSETAAEKPSFRRLVGRRHGVVAFTGFYEWKRDEKGERQPYYF +AD RPLLFAVLYDTWQQG     G+  G XXXXXXXXXXXXXXX                                GG                                G L+FSYAVLTT AAPRL WLHERMPVILRG  DAAAW+ CKG E
Sbjct:    1 MRWGLVPSFTKKGDKPDFFRMFNARSETAAEKPSFRRLVGRRHGVVAFTGFYEWKRDEKGERQPYYFHYADDRPLLFAVLYDTWQQGGDAIQGYGNGGXXXXXXXXXXXXXXXIGDGKAVPTT----------------------GGRGGHADLAGEGEGGLRGQAALLEREVEEEDRGGSLMFSYAVLTTKAAPRLEWLHERMPVILRGAQDAAAWMRCKGQE 202          
BLAST of mRNA_L-elsbetiae_contig1343.2645.1 vs. uniprot
Match: A0A6H5JMR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMR4_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 1.380e-62
Identity = 155/223 (69.51%), Postives = 161/223 (72.20%), Query Frame = 0
Query:   58 RWGLIPSFTKTDEKPDFFRMFNARSETAAEKPSFRRLVGRRHGVVAFTGFYEWKRDEKGERQPYYFRFADGRPLLFAVLYDTWQQGD----GFSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLLFSYAVLTTSAAPRLAWLHERMPVILRGPHDAAAWLGCKGAE 276
            RWGL+PSFTK  +KPDFFRMFNARSETAAEKPSFRRLVGRRHGVVAFTGFYEWKRDEKGERQPYYF +AD RPLL AVLYDTWQQG     G+  G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    X     G                                 G L+FSYAVLTT AAPRL WLHERMPVILRG  DAAAW+ CKG E
Sbjct:   59 RWGLVPSFTKKGDKPDFFRMFNARSETAAEKPSFRRLVGRRHGVVAFTGFYEWKRDEKGERQPYYFHYADDRPLLLAVLYDTWQQGGDAIRGYGNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGEXEGRLRG------------------QAALLEREVEEEDRGGSLMFSYAVLTTKAAPRLEWLHERMPVILRGSQDAAAWMSCKGQE 263          
BLAST of mRNA_L-elsbetiae_contig1343.2645.1 vs. uniprot
Match: A0A835Z2X9_9STRA (DUF159-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2X9_9STRA)

HSP 1 Score: 146 bits (369), Expect = 3.550e-39
Identity = 73/148 (49.32%), Postives = 90/148 (60.81%), Query Frame = 0
Query:    6 VAPQALASAVGFSSNVPLRRASHYVRRENAHPGNAAPIAYRTSA-------------GRNALR--SMRWGLIPSFTKTDEKPDFFRMFNARSETAAEKPSFRRLVGRRHGVVAFTGFYEWKRDEKGERQPYYFRFADGRPLLFAVLYD 138
            V PQA+A A G   NVP RR + +    N HPG   P+ Y   A             G   L   SM WGL+PSF+K ++KP+FFRMFNARSET   K  F+RL+ +R  VVAF GFYEWK+D  GE+QPY+  + DGRP+L A LYD
Sbjct:    9 VEPQAVARATGLPGNVPTRRTARFRPSCNVHPGQNVPVLYHAYAPEQQQEQEKGGGSGHQDLEVASMVWGLVPSFSKPEDKPNFFRMFNARSETVNSKSIFKRLMAKRRAVVAFDGFYEWKKDAAGEKQPYFIHYEDGRPMLMAALYD 156          
BLAST of mRNA_L-elsbetiae_contig1343.2645.1 vs. uniprot
Match: UPI000C872F08 (abasic site processing protein HMCES n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI000C872F08)

HSP 1 Score: 138 bits (348), Expect = 8.500e-35
Identity = 72/148 (48.65%), Postives = 91/148 (61.49%), Query Frame = 0
Query:    3 RQTVAPQALASAVGF--SSNVPLRRASHYVRRENAHPGNAAPI---AYRTSAGRNALRSMRWGLIPSFTKTDEKPDFFRMFNARSETAAEKPSFRRLVGRRHGVVAFTGFYEWKRDEKGERQPYYFRFADGRPLLFAVLYDTWQQGDG 145
            R T+ PQ +  A GF  +S+VP R+   Y    N  PG   P+   A +       +  M+WGL+PSFTK  EKPD FRMFNARSE+  EK SFRRL+     +VA  GFYEWK+D   ++QPYY  F D RPL+FA LYD+WQ  +G
Sbjct:    6 RCTLDPQQIGQACGFVPNSSVPTRQFDRYQPSYNVAPGAYLPVVVAARKDGESPVVIHCMKWGLVPSFTKKTEKPDHFRMFNARSESVKEKASFRRLMPNNRCLVAVEGFYEWKKDGS-KKQPYYIHFKDHRPLIFAALYDSWQNSEG 152          
BLAST of mRNA_L-elsbetiae_contig1343.2645.1 vs. uniprot
Match: A0A8J5LXW9_ZINOF (Uncharacterized protein n=4 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5LXW9_ZINOF)

HSP 1 Score: 138 bits (348), Expect = 8.980e-35
Identity = 71/148 (47.97%), Postives = 93/148 (62.84%), Query Frame = 0
Query:    3 RQTVAPQALASAVGFSSNVPLRRASHYVRRENAHPGNAAPIAY--RTSAGRNALRS---MRWGLIPSFTKTDEKPDFFRMFNARSETAAEKPSFRRLVGRRHGVVAFTGFYEWKRDEKGERQPYYFRFADGRPLLFAVLYDTWQQGDG 145
            R T+ P  +A A GF++++P R+   Y    N  PG   P+    RT+    A  S   M+WGL+PSFTK  EKPD ++MFNARSE+  EKPSF RL+     VVA  GFYEWK+D   ++QPYY  F D RPL+FA LYD+W+  +G
Sbjct:    6 RCTLNPDRVARACGFAASIPTRQIDRYRPSYNVSPGAYLPVLLLERTTGEAEASPSICCMKWGLVPSFTKKTEKPDHYKMFNARSESVKEKPSFCRLLPTNRCVVAVEGFYEWKKDAS-KKQPYYIHFKDSRPLVFAALYDSWKSSEG 152          
BLAST of mRNA_L-elsbetiae_contig1343.2645.1 vs. uniprot
Match: UPI0004991CD6 (embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein isoform X2 n=2 Tax=Malus domestica TaxID=3750 RepID=UPI0004991CD6)

HSP 1 Score: 134 bits (337), Expect = 1.420e-34
Identity = 64/115 (55.65%), Postives = 78/115 (67.83%), Query Frame = 0
Query:   34 NAHPGNAAPIAYRTSAGRN---ALRSMRWGLIPSFTKTDEKPDFFRMFNARSETAAEKPSFRRLVGRRHGVVAFTGFYEWKRDEKGERQPYYFRFADGRPLLFAVLYDTWQQGDG 145
            N  PG+  P+  R          L+ M+WGLIPSFTK  EKPDF+RMFNARSE+  EK SFRRLV +   +VA  GFYEWK+D   ++QPYY  F DGRPLLFA LYD+W+  +G
Sbjct:   38 NVSPGSNLPVVRREDGADGDGVVLQCMKWGLIPSFTKKTEKPDFYRMFNARSESICEKASFRRLVPKSRCIVAVEGFYEWKKDGS-KKQPYYVHFKDGRPLLFAALYDSWENSEG 151          
BLAST of mRNA_L-elsbetiae_contig1343.2645.1 vs. uniprot
Match: A0A540NP23_MALBA (Uncharacterized protein n=3 Tax=Maleae TaxID=721813 RepID=A0A540NP23_MALBA)

HSP 1 Score: 135 bits (340), Expect = 7.720e-34
Identity = 65/115 (56.52%), Postives = 78/115 (67.83%), Query Frame = 0
Query:   34 NAHPGNAAPIAYRTSAGRN---ALRSMRWGLIPSFTKTDEKPDFFRMFNARSETAAEKPSFRRLVGRRHGVVAFTGFYEWKRDEKGERQPYYFRFADGRPLLFAVLYDTWQQGDG 145
            N  PG+  P+  R          L+ M+WGLIPSFTK  EKPDF+RMFNARSE+  EK SFRRLV +   +VA  GFYEWK+D   +RQPYY  F DGRPLLFA LYD+W+  +G
Sbjct:   38 NVSPGSNLPVVRREDGADGDGVVLQCMKWGLIPSFTKKTEKPDFYRMFNARSESICEKASFRRLVPKSRCIVAVEGFYEWKKDGS-KRQPYYVHFKDGRPLLFAALYDSWENSEG 151          
BLAST of mRNA_L-elsbetiae_contig1343.2645.1 vs. uniprot
Match: A0A0C9RQI2_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_25098_1227 transcribed RNA sequence n=1 Tax=Wollemia nobilis TaxID=56998 RepID=A0A0C9RQI2_9SPER)

HSP 1 Score: 131 bits (330), Expect = 8.460e-34
Identity = 67/146 (45.89%), Postives = 91/146 (62.33%), Query Frame = 0
Query:    3 RQTVAPQALASAVGFSSNVPLRRASHYVRRENAHPGNAAPIAYRTSA--GRNA-LRSMRWGLIPSFTKTDEKPDFFRMFNARSETAAEKPSFRRLVGRRHGVVAFTGFYEWKRDEKGERQPYYFRFADGRPLLFAVLYDTWQQGDG 145
            R T+    ++ A GF +++P R +  Y    N  PG+  P+  +     GR   +  M+WGL+PSFTK +EKPD FRMFNARSE+  EK SFRRL+     +VA  GFYEWK+D   ++QP+Y  F D RPL+FA LYD W+  +G
Sbjct:    6 RCTLRVDDVSRACGFQNSLPTRDSERYRPSYNVSPGSYMPVVCKEDMRNGREPHVHCMKWGLVPSFTKKNEKPDHFRMFNARSESVREKASFRRLLPSCRCLVALEGFYEWKKDG-AKKQPFYIHFQDERPLVFAALYDRWEDSEG 150          
BLAST of mRNA_L-elsbetiae_contig1343.2645.1 vs. uniprot
Match: A0A7I4F1Y3_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4F1Y3_PHYPA)

HSP 1 Score: 135 bits (340), Expect = 1.270e-33
Identity = 84/271 (31.00%), Postives = 113/271 (41.70%), Query Frame = 0
Query:    3 RQTVAPQALASAVGFSSNVPLRRASHYVRRENAHPGNAAPIAYRTSAG---RNALRSMRWGLIPSFTKTDEKPDFFRMFNARSETAAEKPSFRRLVGRRHGVVAFTGFYEWKRDEKGERQPYYFRFADGRPLLFAVLYDTWQQGDGFSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLLFSYAVLTTSAAPRLAWLHERMPVILRGPHDAAAWL 270
            R TV   A+  A GFS+ +    A  Y    N  PG   P+     AG      +  MRWGL+P+F K  EKPDF+RMFNARSE+  +K SFRRL+ +   +    GFYEWK+D + ++QPYY    DG PL+FA LYDTW+  +                                                                                       G +L+++ +LTT  + RL WLH+RMPVIL+G     +WL
Sbjct:    6 RCTVRVDAVGRACGFSAPLRSVNADRYQPSYNVAPGAHMPVVRHDGAGDAREPVVHCMRWGLVPNFAKKSEKPDFYRMFNARSESVHQKISFRRLLAKNRCLTTVEGFYEWKKDGQ-KKQPYYIHMQDGHPLVFAALYDTWESPE---------------------------------------------------------------------------------------GDMLYTFTILTTRVSKRLEWLHDRMPVILKGQDTIDSWL 188          
BLAST of mRNA_L-elsbetiae_contig1343.2645.1 vs. uniprot
Match: A0A6V7NPE3_ANACO (Uncharacterized protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7NPE3_ANACO)

HSP 1 Score: 129 bits (323), Expect = 1.460e-33
Identity = 62/132 (46.97%), Postives = 84/132 (63.64%), Query Frame = 0
Query:   18 SSNVPLRRASHYVRRE-NAHPGNAAPIAYRTSAGRNA---LRSMRWGLIPSFTKTDEKPDFFRMFNARSETAAEKPSFRRLVGRRHGVVAFTGFYEWKRDEKGERQPYYFRFADGRPLLFAVLYDTWQQGDG 145
            +S++P R+   Y R   N  PG   P+  + + G  A   +  M+WGL+PSFTK  +KPD ++MFNARSE+  EK SFRRL+     +VA  GFYEWK+D   ++QPYY  F D RPL+FA LYD+W   +G
Sbjct:   26 ASSLPARQMDRYYRPSYNVSPGACLPVVRKAAVGEEAAPAIHCMKWGLVPSFTKKTDKPDHYKMFNARSESIKEKTSFRRLLPTNRCLVAVEGFYEWKKDGS-KKQPYYIHFEDQRPLVFAALYDSWSNSEG 156          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1343.2645.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2K0_ECTSI5.370e-6860.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMR4_9PHAE1.380e-6269.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z2X9_9STRA3.550e-3949.32DUF159-domain-containing protein n=1 Tax=Tribonema... [more]
UPI000C872F088.500e-3548.65abasic site processing protein HMCES n=1 Tax=Diosc... [more]
A0A8J5LXW9_ZINOF8.980e-3547.97Uncharacterized protein n=4 Tax=Zingiber officinal... [more]
UPI0004991CD61.420e-3455.65embryonic stem cell-specific 5-hydroxymethylcytosi... [more]
A0A540NP23_MALBA7.720e-3456.52Uncharacterized protein n=3 Tax=Maleae TaxID=72181... [more]
A0A0C9RQI2_9SPER8.460e-3445.89TSA: Wollemia nobilis Ref_Wollemi_Transcript_25098... [more]
A0A7I4F1Y3_PHYPA1.270e-3331.00Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
A0A6V7NPE3_ANACO1.460e-3346.97Uncharacterized protein n=1 Tax=Ananas comosus var... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 206..226
IPR036590SOS response associated peptidase-likeGENE3D3.90.1680.10coord: 2..168
e-value: 2.6E-33
score: 117.3
IPR036590SOS response associated peptidase-likeGENE3D3.90.1680.10coord: 169..276
e-value: 1.5E-11
score: 46.2
IPR036590SOS response associated peptidase-likeSUPERFAMILY143081BB1717-likecoord: 223..272
IPR036590SOS response associated peptidase-likeSUPERFAMILY143081BB1717-likecoord: 11..145
IPR003738SOS response associated peptidase (SRAP)PFAMPF02586SRAPcoord: 5..271
e-value: 2.8E-43
score: 148.0
IPR003738SOS response associated peptidase (SRAP)PANTHERPTHR13604DC12-RELATEDcoord: 3..144
coord: 228..271

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1343contigL-elsbetiae_contig1343:22349..26797 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1343.2645.1mRNA_L-elsbetiae_contig1343.2645.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1343 22349..26797 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1343.2645.1 ID=prot_L-elsbetiae_contig1343.2645.1|Name=mRNA_L-elsbetiae_contig1343.2645.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=276bp
KHRQTVAPQALASAVGFSSNVPLRRASHYVRRENAHPGNAAPIAYRTSAG
RNALRSMRWGLIPSFTKTDEKPDFFRMFNARSETAAEKPSFRRLVGRRHG
VVAFTGFYEWKRDEKGERQPYYFRFADGRPLLFAVLYDTWQQGDGFSGGG
GGGDKSRATAAAAAAAAGSKLQPDSSRNETEEQKRRGRELEGRGRGRGGG
QEEHHHEQQTAQTALLEREVVEEEEEEEDRGGRLLFSYAVLTTSAAPRLA
WLHERMPVILRGPHDAAAWLGCKGAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036590SRAP-like
IPR003738SRAP