prot_L-elsbetiae_contig13420.2639.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13420.2639.1
Unique Nameprot_L-elsbetiae_contig13420.2639.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length269
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig13420.2639.1 vs. uniprot
Match: D7G706_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G706_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 4.180e-73
Identity = 129/226 (57.08%), Postives = 147/226 (65.04%), Query Frame = 0 
Query:   33 RSQTSLSGARARTASLPQCDRPQGARGSRRATTAAS-ARGDSVLVNAHPRQGIFLPHARYEAGDDNKFYTASPVCTLGRIFSDSSLIQPAWTKVATSPWGEAARVSGGYGERLLNGANSVETPDFMFSKRFGGHVRDYSFKKRSRPFAYNGEANTAVSYDTPTFFRGLHTQVYGRPLEKIDKPRLLKIRLGRQMIAEPEVPETGLVGGPLDWSDMRVAGSSLAARH 257
            RSQT    ARA+TA+LPQ DR +  RG+ RATTA S AR  S       R GIFLP  ++EA +++KFYTASPVCTL RIFSDSSLIQP+W KVATSPWGEAARV+GGYGERLLNGANSVE+PDFM SK                                          VYGRP+EKIDKPRLLK+ LG+Q+IAEPEVPET L GGPLDW  M V GS ++  H
Sbjct:    4 RSQTHWPQARAQTANLPQPDRTRSERGTLRATTARSRARDASSRRRGDARSGIFLPQVKFEADENSKFYTASPVCTLSRIFSDSSLIQPSWPKVATSPWGEAARVTGGYGERLLNGANSVESPDFMLSK------------------------------------------VYGRPIEKIDKPRLLKMHLGKQIIAEPEVPETDLAGGPLDWGGMAVTGSGVSVPH 187
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13420.2639.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G706_ECTSI4.180e-7357.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13420contigL-elsbetiae_contig13420:1653..4309 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13420.2639.1mRNA_L-elsbetiae_contig13420.2639.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13420 1650..4434 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13420.2639.1 ID=prot_L-elsbetiae_contig13420.2639.1|Name=mRNA_L-elsbetiae_contig13420.2639.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=269bp
MTSRRRERVGAGQTTNFVKPPRAHAMTPLSTRRSQTSLSGARARTASLPQ
CDRPQGARGSRRATTAASARGDSVLVNAHPRQGIFLPHARYEAGDDNKFY
TASPVCTLGRIFSDSSLIQPAWTKVATSPWGEAARVSGGYGERLLNGANS
VETPDFMFSKRFGGHVRDYSFKKRSRPFAYNGEANTAVSYDTPTFFRGLH
TQVYGRPLEKIDKPRLLKIRLGRQMIAEPEVPETGLVGGPLDWSDMRVAG
SSLAARHSSAWLARTTDS*
back to top