prot_L-elsbetiae_contig1340.2620.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1340.2620.1
Unique Nameprot_L-elsbetiae_contig1340.2620.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length106
Homology
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BLAST of mRNA_L-elsbetiae_contig1340.2620.1 vs. uniprot
Match: A0A6H5K5U2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5U2_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 2.660e-25
Identity = 61/108 (56.48%), Postives = 71/108 (65.74%), Query Frame = 0 
Query:    1 CAHCR--RWSPTTNVFACCQMGAHHREVVLVDAQGARESVGILCPASEQLIQKTTRVLPPMKGLELGTIVDLDPDSTVKVDDRVTFVVSCQECAGLSLGHCLDRGHVQ 106
            C+ CR  R +    VF+C +M AHHREV LVDA GAR+ VGIL   SE  +QK   VLP      LGT  DLDPDST+   D VTF+VSC ECAG SLG C+D+GH Q
Sbjct:   56 CSFCRSQRVASFNGVFSCYKMNAHHREVELVDAGGARDGVGILSARSE--LQKN-HVLPKQTE-RLGTFGDLDPDSTLNSGDGVTFIVSCDECAGFSLGLCIDKGHCQ 159
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1340.2620.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K5U2_9PHAE2.660e-2556.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1340contigL-elsbetiae_contig1340:761..1078 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1340.2620.1mRNA_L-elsbetiae_contig1340.2620.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1340 761..1078 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1340.2620.1 ID=prot_L-elsbetiae_contig1340.2620.1|Name=mRNA_L-elsbetiae_contig1340.2620.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=106bp
CAHCRRWSPTTNVFACCQMGAHHREVVLVDAQGARESVGILCPASEQLIQ
KTTRVLPPMKGLELGTIVDLDPDSTVKVDDRVTFVVSCQECAGLSLGHCL
DRGHVQ
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