prot_L-elsbetiae_contig13393.2615.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13393.2615.1
Unique Nameprot_L-elsbetiae_contig13393.2615.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length316
Homology
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BLAST of mRNA_L-elsbetiae_contig13393.2615.1 vs. uniprot
Match: A0A6H5K4M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M0_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 1.180e-5
Identity = 28/50 (56.00%), Postives = 38/50 (76.00%), Query Frame = 0 
Query:    1 METLVRSASIELWTWCECLHLRGAVSSASLRLVAW-PRGLRQLVVGGALE 49
            ME+L+R+A+IELWTW ECL L+G++ +ASLR   W PR L QLV+   L+
Sbjct: 1125 MESLLRTAAIELWTWSECLELQGSLCAASLRSANWWPRRLTQLVLKADLD 1174
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13393.2615.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K4M0_9PHAE1.180e-556.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 181..222
e-value: 2.3E-5
score: 24.5
coord: 93..135
e-value: 8.2E-5
score: 22.7
coord: 137..180
e-value: 5.2E-5
score: 23.3
coord: 225..266
e-value: 1.7E-5
score: 24.9
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 103..308
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 35..200
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 103..308
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 35..200
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 35..308

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13393contigL-elsbetiae_contig13393:848..1795 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13393.2615.1mRNA_L-elsbetiae_contig13393.2615.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13393 559..2095 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13393.2615.1 ID=prot_L-elsbetiae_contig13393.2615.1|Name=mRNA_L-elsbetiae_contig13393.2615.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=316bp
METLVRSASIELWTWCECLHLRGAVSSASLRLVAWPRGLRQLVVGGALET
SMAEVSWPASLQSLAFGHSFNLPLLPRVAWPASLQQLSFGYWFNQPIVGV
EWPASLRQLSFDCRFDQPVSGIIWPTSVQQISFGYLFNKPIAEVVWPGAL
QRLTFGANFDQPITGVAWPASLQRLLFGKFFDQPLAGVVWPTSLQQLSFG
DEFNQPIVEAAWPASLQRICFGLSFDQPIAEVVWPASLQQLSFGDDFNEP
IAGVAWPASLRQLSFGASFNQPITGVAWPACLQWLSFGFDFNQAIDGVAW
PSTLQRLTRDGISLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP