prot_L-elsbetiae_contig13374.2603.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13374.2603.1
Unique Nameprot_L-elsbetiae_contig13374.2603.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length39
Homology
BLAST of mRNA_L-elsbetiae_contig13374.2603.1 vs. uniprot
Match: A0A6H5KBU9_9PHAE (MI domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU9_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 6.790e-15
Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 0
Query:    1 MLGNIQFIGELYKKSMLKENVMKTCVEHLLNATKEVNPD 39
            MLGNIQFIGELYKKSMLKENVMKTCVEHLLNA KEV  D
Sbjct:  580 MLGNIQFIGELYKKSMLKENVMKTCVEHLLNAKKEVGAD 618          
BLAST of mRNA_L-elsbetiae_contig13374.2603.1 vs. uniprot
Match: D7G664_ECTSI (Eukaryotic initiation factor 4G n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G664_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 1.550e-13
Identity = 35/39 (89.74%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    1 MLGNIQFIGELYKKSMLKENVMKTCVEHLLNATKEVNPD 39
            MLGNIQFIGELYKKSMLKENVMKTCVE LLNA KEV  D
Sbjct:   24 MLGNIQFIGELYKKSMLKENVMKTCVEQLLNAKKEVATD 62          
BLAST of mRNA_L-elsbetiae_contig13374.2603.1 vs. uniprot
Match: A0A0D2WVB2_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WVB2_CAPO3)

HSP 1 Score: 52.4 bits (124), Expect = 9.450e-7
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0
Query:    1 MLGNIQFIGELYKKSMLKENVMKTCVEHLLNATKEVNPD 39
            MLGNI+FIGEL+K  MLKE V+  C++ LL   K V+PD
Sbjct:  299 MLGNIRFIGELFKLEMLKERVLHICIQQLLGDLKHVDPD 337          
BLAST of mRNA_L-elsbetiae_contig13374.2603.1 vs. uniprot
Match: C1MK47_MICPC (Predicted protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MK47_MICPC)

HSP 1 Score: 52.0 bits (123), Expect = 1.140e-6
Identity = 25/39 (64.10%), Postives = 29/39 (74.36%), Query Frame = 0
Query:    1 MLGNIQFIGELYKKSMLKENVMKTCVEHLLNATKEVNPD 39
            MLGNI+FIGEL+KK ML E +M TC+  LL  TK  NPD
Sbjct:  145 MLGNIRFIGELFKKQMLTERIMHTCIMKLLGETK--NPD 181          
BLAST of mRNA_L-elsbetiae_contig13374.2603.1 vs. uniprot
Match: A0A1V9YEM4_9STRA (Eukaryotic translation initiation factor 4 gamma n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YEM4_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 1.290e-6
Identity = 23/39 (58.97%), Postives = 28/39 (71.79%), Query Frame = 0
Query:    1 MLGNIQFIGELYKKSMLKENVMKTCVEHLLNATKEVNPD 39
            MLGNI+FIGELYKK ML+E +M  CV  +LN T+    D
Sbjct:  849 MLGNIRFIGELYKKGMLQERIMHECVAKMLNVTRAPGED 887          
BLAST of mRNA_L-elsbetiae_contig13374.2603.1 vs. uniprot
Match: A0A1V9Y791_9STRA (Eukaryotic translation initiation factor 4 gamma n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y791_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 1.770e-6
Identity = 22/33 (66.67%), Postives = 27/33 (81.82%), Query Frame = 0
Query:    1 MLGNIQFIGELYKKSMLKENVMKTCVEHLLNAT 33
            MLGNI+FIGELYKK ML+E +M  C++ LLN T
Sbjct:  847 MLGNIRFIGELYKKGMLQERIMHECIKKLLNVT 879          
BLAST of mRNA_L-elsbetiae_contig13374.2603.1 vs. uniprot
Match: A0A1E7EXR9_9STRA (ARM repeat-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EXR9_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 2.430e-6
Identity = 23/37 (62.16%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    1 MLGNIQFIGELYKKSMLKENVMKTCVEHLLNA-TKEV 36
            MLGN++FIG+LYKKS+LKE +M+ C+  LLN  TK+V
Sbjct:  136 MLGNVKFIGQLYKKSLLKEKIMRFCIADLLNLETKDV 172          
BLAST of mRNA_L-elsbetiae_contig13374.2603.1 vs. uniprot
Match: A0A7S4EJZ7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EJZ7_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 4.530e-6
Identity = 23/37 (62.16%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    1 MLGNIQFIGELYKKSMLKENVMKTCVEHLLNA-TKEV 36
            MLGNI+FIG+LYKK++LKE +M+ C+  LLN  TK+V
Sbjct:  742 MLGNIKFIGQLYKKNLLKEKIMRFCIASLLNLQTKDV 778          
BLAST of mRNA_L-elsbetiae_contig13374.2603.1 vs. uniprot
Match: A0A7S0ULU2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0ULU2_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 4.530e-6
Identity = 23/37 (62.16%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    1 MLGNIQFIGELYKKSMLKENVMKTCVEHLLNA-TKEV 36
            MLGNI+FIG+LYKK++LKE +M+ C+  LLN  TK+V
Sbjct:  584 MLGNIKFIGQLYKKNLLKEKIMRFCIASLLNLETKDV 620          
BLAST of mRNA_L-elsbetiae_contig13374.2603.1 vs. uniprot
Match: C1E1G6_MICCC (MIF4G domain-containing protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E1G6_MICCC)

HSP 1 Score: 49.7 bits (117), Expect = 7.900e-6
Identity = 24/39 (61.54%), Postives = 28/39 (71.79%), Query Frame = 0
Query:    1 MLGNIQFIGELYKKSMLKENVMKTCVEHLLNATKEVNPD 39
            MLGNI+FIGEL+KK ML   +M TC+  LLN  K  NPD
Sbjct:  151 MLGNIRFIGELFKKEMLTARIMHTCIMKLLNEKK--NPD 187          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13374.2603.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBU9_9PHAE6.790e-1592.31MI domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7G664_ECTSI1.550e-1389.74Eukaryotic initiation factor 4G n=1 Tax=Ectocarpus... [more]
A0A0D2WVB2_CAPO39.450e-758.97Uncharacterized protein n=1 Tax=Capsaspora owczarz... [more]
C1MK47_MICPC1.140e-664.10Predicted protein (Fragment) n=1 Tax=Micromonas pu... [more]
A0A1V9YEM4_9STRA1.290e-658.97Eukaryotic translation initiation factor 4 gamma n... [more]
A0A1V9Y791_9STRA1.770e-666.67Eukaryotic translation initiation factor 4 gamma n... [more]
A0A1E7EXR9_9STRA2.430e-662.16ARM repeat-containing protein n=1 Tax=Fragilariops... [more]
A0A7S4EJZ7_9STRA4.530e-662.16Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S0ULU2_9STRA4.530e-662.16Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
C1E1G6_MICCC7.900e-661.54MIF4G domain-containing protein (Fragment) n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016021MIF4G-like domain superfamilyGENE3D1.25.40.180coord: 1..39
e-value: 7.7E-12
score: 46.8
NoneNo IPR availablePANTHERPTHR23253EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMAcoord: 1..34
NoneNo IPR availablePANTHERPTHR23253:SF9EUKARYOTIC TRANSLATION INITIATION FACTOR 4G, ISOFORM B-RELATEDcoord: 1..34
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13374contigL-elsbetiae_contig13374:3989..4105 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13374.2603.1mRNA_L-elsbetiae_contig13374.2603.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13374 3974..4105 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13374.2603.1 ID=prot_L-elsbetiae_contig13374.2603.1|Name=mRNA_L-elsbetiae_contig13374.2603.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=39bp
MLGNIQFIGELYKKSMLKENVMKTCVEHLLNATKEVNPD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016021MIF4-like_sf
IPR016024ARM-type_fold