prot_L-elsbetiae_contig13351.2592.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13351.2592.1
Unique Nameprot_L-elsbetiae_contig13351.2592.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length162
Homology
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BLAST of mRNA_L-elsbetiae_contig13351.2592.1 vs. uniprot
Match: D7G4U3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4U3_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 2.000e-29
Identity = 67/162 (41.36%), Postives = 81/162 (50.00%), Query Frame = 0 
Query:    1 MGGTPSNARHKDLVAEIGRWPDFKERTCLTSSDVSSIAAAFRKASETSAGDSLLRTDFEQWLEMTDKPTPAQERLFEVFLVSHDDENICLFDFVVGLLNYCVDGKEHLSRLAFDVYDRHTTGTITEADLEGMLIDVWGANWEGEDLARGLLAERSGMDPMQP 162
            MG TPSN R K+ VAEI  WP F ER C+TSSDVS IA AFRKA+E+S G  L R DFE WL+M  KP P +ERLFEVF+++  ++                                                       + + LARGLLAER G+DPMQP
Sbjct:    1 MGATPSNTRQKEFVAEIQGWPGFVERMCMTSSDVSGIATAFRKATESSEGKYLQRADFEHWLDMGSKPKPVEERLFEVFIINSGEQ-------------------------------------------------------QDDALARGLLAERVGVDPMQP 107
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BLAST of mRNA_L-elsbetiae_contig13351.2592.1 vs. uniprot
Match: A0A6H5JUH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUH1_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 1.930e-28
Identity = 53/91 (58.24%), Postives = 65/91 (71.43%), Query Frame = 0 
Query:    1 MGGTPSNARHKDLVAEIGRWPDFKERTCLTSSDVSSIAAAFRKASETSAGDSLLRTDFEQWLEMTDKPTPAQERLFEVFLVSHDDENICLF 91
            MG TPSN R K+ VAEI  WP F ER C+TSSDVS IA AF KA+E+S G  L R DFE WL+M  KP P +ERLFEVF+V+ +++ +  F
Sbjct:    1 MGATPSNTRQKEFVAEIEGWPGFVERMCMTSSDVSGIATAFVKATESSDGKYLQRADFEHWLDMGSKPKPVEERLFEVFIVNSEEQQVHQF 91
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13351.2592.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4U3_ECTSI2.000e-2941.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUH1_9PHAE1.930e-2858.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 19..154
e-value: 2.8E-12
score: 48.4
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 24..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13351contigL-elsbetiae_contig13351:1114..4382 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13351.2592.1mRNA_L-elsbetiae_contig13351.2592.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13351 1114..4480 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13351.2592.1 ID=prot_L-elsbetiae_contig13351.2592.1|Name=mRNA_L-elsbetiae_contig13351.2592.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=162bp
MGGTPSNARHKDLVAEIGRWPDFKERTCLTSSDVSSIAAAFRKASETSAG
DSLLRTDFEQWLEMTDKPTPAQERLFEVFLVSHDDENICLFDFVVGLLNY
CVDGKEHLSRLAFDVYDRHTTGTITEADLEGMLIDVWGANWEGEDLARGL
LAERSGMDPMQP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair