prot_L-elsbetiae_contig1332.2571.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1332.2571.1
Unique Nameprot_L-elsbetiae_contig1332.2571.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length73
Homology
BLAST of mRNA_L-elsbetiae_contig1332.2571.1 vs. uniprot
Match: A0A6H5L7D6_9PHAE (4F5 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7D6_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.380e-17
Identity = 42/44 (95.45%), Postives = 44/44 (100.00%), Query Frame = 0
Query:    1 MARGNQRDRDRMKAQAKDAKKGGKSKEGCPRARQERDAQAMREK 44
            MARGNQRDRDR+KAQAK+AKKGGKSKEGCPRARQERDAQAMREK
Sbjct:    1 MARGNQRDRDRLKAQAKEAKKGGKSKEGCPRARQERDAQAMREK 44          
BLAST of mRNA_L-elsbetiae_contig1332.2571.1 vs. uniprot
Match: A0A7C9DPE2_OPUST (4F5 domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DPE2_OPUST)

HSP 1 Score: 50.4 bits (119), Expect = 3.330e-6
Identity = 30/53 (56.60%), Postives = 44/53 (83.02%), Query Frame = 0
Query:    1 MARGNQRDRDRMKAQAKDAKKGGKSKEG--CPRARQERDAQAMREKQARKAAE 51
            M+RGNQR+ DR +AQ+++AKKGGK+K+    P  R+ERDA+A++EK A+KAA+
Sbjct:   47 MSRGNQREIDRQRAQSRNAKKGGKNKDDGLTPEQRRERDAKALQEKAAKKAAQ 99          
BLAST of mRNA_L-elsbetiae_contig1332.2571.1 vs. uniprot
Match: UPI000B8CCF42 (putative SERF-like protein n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CCF42)

HSP 1 Score: 48.1 bits (113), Expect = 1.030e-5
Identity = 29/53 (54.72%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    1 MARGNQRDRDRMKAQAKDAKKGGKSKEG--CPRARQERDAQAMREKQARKAAE 51
            M RGNQR+RDR +AQ++   KGGK K+    P  R+ERDA+A++EK A+KAA+
Sbjct:    1 MTRGNQRERDRERAQSRSTNKGGKGKDDGLTPEQRRERDAKALQEKAAKKAAQ 53          
BLAST of mRNA_L-elsbetiae_contig1332.2571.1 vs. uniprot
Match: UPI000D1C6B93 (uncharacterized protein LOC112342205 n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C6B93)

HSP 1 Score: 47.4 bits (111), Expect = 2.170e-5
Identity = 31/51 (60.78%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    1 MARGNQRDRDRMKAQAKDAKKGGKSKEGC-PRARQERDAQAMREKQARKAA 50
            M RGNQR++DR +AQA+ AK GGK+K+   P  R+ERDA+A++EK ARKAA
Sbjct:    1 MTRGNQREKDRERAQARSAK-GGKAKDDLTPEQRRERDAKALQEKNARKAA 50          
BLAST of mRNA_L-elsbetiae_contig1332.2571.1 vs. uniprot
Match: UPI000B78714B (putative SERF-like protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B78714B)

HSP 1 Score: 47.0 bits (110), Expect = 3.000e-5
Identity = 29/53 (54.72%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    1 MARGNQRDRDRMKAQAKDAKKGGKSKEG--CPRARQERDAQAMREKQARKAAE 51
            M RGNQR+RDR +AQA+   KGGK+K+    P  R+ERDA+A++EK A+KA +
Sbjct:    1 MTRGNQRERDRERAQARTTGKGGKTKDDGLTPEQRRERDAKALQEKAAKKAGQ 53          
BLAST of mRNA_L-elsbetiae_contig1332.2571.1 vs. uniprot
Match: A0A329SWQ1_9STRA (4F5 domain-containing protein n=11 Tax=Peronosporaceae TaxID=4777 RepID=A0A329SWQ1_9STRA)

HSP 1 Score: 46.2 bits (108), Expect = 6.310e-5
Identity = 28/50 (56.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    1 MARGNQRDRDRMKAQAKDAKKGGKSKEGCPRARQERDAQAMREKQARKAA 50
            M RGNQRD DR +AQA+ AK    + +G P A++E DA+A++EK ARKAA
Sbjct:    1 MTRGNQRDTDRARAQARQAKNAKSTSQGNPLAKREADAKALQEKIARKAA 50          
BLAST of mRNA_L-elsbetiae_contig1332.2571.1 vs. uniprot
Match: UPI000772B93C (putative SERF-like protein n=1 Tax=Ricinus communis TaxID=3988 RepID=UPI000772B93C)

HSP 1 Score: 45.8 bits (107), Expect = 8.360e-5
Identity = 29/53 (54.72%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    1 MARGNQRDRDRMKAQAKDAKKGGKSKEG--CPRARQERDAQAMREKQARKAAE 51
            M RGNQR+RDR +AQA+   KG K K+    P  R+ERDA+A++EK A+KAA+
Sbjct:    1 MTRGNQRERDRERAQARTGGKGSKGKDDGLTPEQRRERDAKALQEKTAKKAAQ 53          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1332.2571.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5L7D6_9PHAE1.380e-1795.454F5 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7C9DPE2_OPUST3.330e-656.604F5 domain-containing protein n=1 Tax=Opuntia stre... [more]
UPI000B8CCF421.030e-554.72putative SERF-like protein n=1 Tax=Carica papaya T... [more]
UPI000D1C6B932.170e-560.78uncharacterized protein LOC112342205 n=1 Tax=Selag... [more]
UPI000B78714B3.000e-554.72putative SERF-like protein n=1 Tax=Hevea brasilien... [more]
A0A329SWQ1_9STRA6.310e-556.004F5 domain-containing protein n=11 Tax=Peronospora... [more]
UPI000772B93C8.360e-554.72putative SERF-like protein n=1 Tax=Ricinus communi... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 40..62
IPR007513Uncharacterised protein family SERF, N-terminalPFAMPF044194F5coord: 1..25
e-value: 5.3E-5
score: 24.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1332contigL-elsbetiae_contig1332:21104..22823 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1332.2571.1mRNA_L-elsbetiae_contig1332.2571.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1332 21104..22823 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1332.2571.1 ID=prot_L-elsbetiae_contig1332.2571.1|Name=mRNA_L-elsbetiae_contig1332.2571.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=73bp
MARGNQRDRDRMKAQAKDAKKGGKSKEGCPRARQERDAQAMREKQARKAA
EKEAAAKEAAEAAAAAAAAAKK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007513Uncharacterised_SERF_N