prot_L-elsbetiae_contig13313.2565.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13313.2565.1
Unique Nameprot_L-elsbetiae_contig13313.2565.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length133
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig13313.2565.1 vs. uniprot
Match: D8LLH2_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLH2_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 1.840e-37
Identity = 84/106 (79.25%), Postives = 93/106 (87.74%), Query Frame = 0 
Query:    1 SSSARLDLSRAERALVEVTAQRDEALELLDAARHENARLSDELDRARSYKALYAAARHEHKGMKASLAASTQICMGQQKLIQMLQQASSAPPTHALDPDELLAGPG 106
            SSS RL L  AE+AL EVTAQRD+ALELL+ +R ENA+L+ ELDRARSYKALYAAA HEH+GMKASLAASTQICMGQQKLIQMLQQASSAPP  ALDP++ LAG G
Sbjct:   30 SSSTRLSL--AEKALAEVTAQRDDALELLELSRQENAKLTAELDRARSYKALYAAAHHEHQGMKASLAASTQICMGQQKLIQMLQQASSAPPP-ALDPEDFLAGVG 132
[Close]
BLAST of mRNA_L-elsbetiae_contig13313.2565.1 vs. uniprot
Match: A0A6H5JQY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY6_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 2.200e-5
Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 0 
Query:   59 EHKGMKASLAASTQICMGQQKLIQMLQQA 87
            EH+GMKASLAASTQICM QQKLIQMLQQA
Sbjct:    9 EHQGMKASLAASTQICMDQQKLIQMLQQA 37
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13313.2565.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLH2_ECTSI1.840e-3779.25Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JQY6_9PHAE2.200e-593.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 8..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13313contigL-elsbetiae_contig13313:2465..3724 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13313.2565.1mRNA_L-elsbetiae_contig13313.2565.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13313 2463..3724 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13313.2565.1 ID=prot_L-elsbetiae_contig13313.2565.1|Name=mRNA_L-elsbetiae_contig13313.2565.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=133bp
SSSARLDLSRAERALVEVTAQRDEALELLDAARHENARLSDELDRARSYK
ALYAAARHEHKGMKASLAASTQICMGQQKLIQMLQQASSAPPTHALDPDE
LLAGPGGGGGGLTPPAPPSPLLQTGGRRGRTLG
back to top