prot_L-elsbetiae_contig133.2557.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig133.2557.1
Unique Nameprot_L-elsbetiae_contig133.2557.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length179
Homology
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BLAST of mRNA_L-elsbetiae_contig133.2557.1 vs. uniprot
Match: A0A6H5KKF3_9PHAE (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKF3_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 7.110e-22
Identity = 60/118 (50.85%), Postives = 72/118 (61.02%), Query Frame = 0 
Query:    2 VFVGIVVGILWDQR--ATDGAIGEAKAGSSKEDALDARSASAAAAVKPKAPLSRSLHSIDVDGPGCGAQAFLSPTHKVPGFHLACVEQQPG-----GRAVSVTLFPLGQGAGNQTLVV 112
            V +GIVVGILWD    AT    GE    S+K +A              K P+SRSLH++DV GPGCGA  +LSPTH V GFHLAC+E++ G     G  VSVTLF  G+G GNQTL +
Sbjct:   42 VAIGIVVGILWDPSTPATGETAGEVTTDSAKTNA--------------KPPISRSLHAVDVSGPGCGAHRYLSPTHGVSGFHLACIEEEAGSSGGRGGVVSVTLFRDGRGEGNQTLAL 145
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig133.2557.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KKF3_9PHAE7.110e-2250.85Fe2OG dioxygenase domain-containing protein n=2 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..140
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 141..163
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 164..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig133contigL-elsbetiae_contig133:51897..54006 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig133.2557.1mRNA_L-elsbetiae_contig133.2557.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig133 51839..54049 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig133.2557.1 ID=prot_L-elsbetiae_contig133.2557.1|Name=mRNA_L-elsbetiae_contig133.2557.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=179bp
MVFVGIVVGILWDQRATDGAIGEAKAGSSKEDALDARSASAAAAVKPKAP
LSRSLHSIDVDGPGCGAQAFLSPTHKVPGFHLACVEQQPGGRAVSVTLFP
LGQGAGNQTLVVPMTGEAEEGPKSARAVLFVRHSRKKKKGVPLLLVSLAA
AGGASHPLLVLSVGSPEYLAGGPVVVWH*
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