prot_L-elsbetiae_contig13264.2534.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13264.2534.1
Unique Nameprot_L-elsbetiae_contig13264.2534.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length185
Homology
BLAST of mRNA_L-elsbetiae_contig13264.2534.1 vs. uniprot
Match: D7FK94_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK94_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 9.780e-7
Identity = 51/125 (40.80%), Postives = 64/125 (51.20%), Query Frame = 0
Query:   13 MRFGSPEAFRSDLHPPPTFWSTSASNQ---TPTAFLDDGSSHA--HRTTGAHAI---FQRTAGANTICSTLR-------RRKK---LTAANPGKAACDG-VVGGRLRRGRSASRRRRRPNRGAMG 118
            M FG+P  F S +HPPP+FWSTSA+NQ   T  A  DD  +H+  HR  G       F   A A+T+CS LR       RRKK   + AA  G+    G  VGG +R     + +R RP R   G
Sbjct:    1 MSFGAPGVFESGIHPPPSFWSTSAANQAAPTTAAVADDFHTHSGGHRPQGHREYDSRFDGAATADTVCSMLRALETASDRRKKPPGMVAAGAGQGTGGGRAVGGNVR----GTVKRLRPRRNLAG 121          
BLAST of mRNA_L-elsbetiae_contig13264.2534.1 vs. uniprot
Match: A0A6H5JV24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV24_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 1.330e-6
Identity = 54/125 (43.20%), Postives = 64/125 (51.20%), Query Frame = 0
Query:   13 MRFGSPEAFRSDLHPPPTFWSTSASNQT-PTAFLDDGSSHA----HRTTGAHAIFQR---TAGANTICSTLR-------RRKK---LTAANPGKAACDG-VVGGRLRRGRSASRRRRRPNRGAMG 118
            M FG+  AF S +HPPP+FWSTSA NQ  P A  DD   HA    HR  G      R    A A+T+CS LR       RRKK   +  A  GK +  G VVGG++R     S +R RP R   G
Sbjct:    1 MNFGASGAFESGIHPPPSFWSTSAVNQAVPAADADDF--HAPFGGHRPQGHREYDSRCDVAATADTVCSMLRTLENASDRRKKPPGVVEAGAGKGSGGGRVVGGKVR----GSVKRLRPRRNLAG 119          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13264.2534.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FK94_ECTSI9.780e-740.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JV24_9PHAE1.330e-643.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13264contigL-elsbetiae_contig13264:1091..3443 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13264.2534.1mRNA_L-elsbetiae_contig13264.2534.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13264 1089..3443 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13264.2534.1 ID=prot_L-elsbetiae_contig13264.2534.1|Name=mRNA_L-elsbetiae_contig13264.2534.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=185bp
SRTREKGGAHKAMRFGSPEAFRSDLHPPPTFWSTSASNQTPTAFLDDGSS
HAHRTTGAHAIFQRTAGANTICSTLRRRKKLTAANPGKAACDGVVGGRLR
RGRSASRRRRRPNRGAMGCLPRPPQSSVRGGVVSTFATKDISDRHGRSSP
QTAAPPPEPTECWGRDSSNRPYEPSPPRPPPSPFP
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