prot_L-elsbetiae_contig1323.2514.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1323.2514.1
Unique Nameprot_L-elsbetiae_contig1323.2514.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length198
Homology
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BLAST of mRNA_L-elsbetiae_contig1323.2514.1 vs. uniprot
Match: D7G9C3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9C3_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 2.310e-31
Identity = 89/195 (45.64%), Postives = 112/195 (57.44%), Query Frame = 0 
Query:   16 QISLSNPLTIPVSFRLETCGPFAINPTPSKKRLHNGKKTAQRCFSGADG--------GAKCPDGNQHSHHRGAPEGGGSSPKCRRA---AATRDRAVEDSGAADAVAAGVPKPATRRPAKHQQQGQEVVLLPGRNLQLELVFMPSR-SPEMSESLVSSFSPGRENIPKLIFRTSGELHIAFSTGHVQAVLLRGEV 198
            QISLSNPLTIPVSFR+ET GPF IN  P KKRL++GK + +   SG           G +        +H  A      SPK RRA   A+  +R    +   D       +   R   +H++    + LLPG+N QLE+VF+P R S +M E L SSFSPG E IP+L+ RT+GEL IAF TGHVQ + LRGEV
Sbjct:  924 QISLSNPLTIPVSFRVETSGPFVINRCPPKKRLNSGKTSFETQLSGXXXXXXXXRCQGRRRQQSQLADNHNQAMR----SPKRRRAGDGASCANRGQRTASVMDTQDHNQHQKQHRPERQHRRTNDLISLLPGQNRQLEVVFLPLRASAKMLECLKSSFSPGTEGIPRLVLRTTGELTIAFCTGHVQRIFLRGEV 1114
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1323.2514.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G9C3_ECTSI2.310e-3145.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1323contigL-elsbetiae_contig1323:247..1397 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1323.2514.1mRNA_L-elsbetiae_contig1323.2514.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1323 247..25894 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1323.2514.1 ID=prot_L-elsbetiae_contig1323.2514.1|Name=mRNA_L-elsbetiae_contig1323.2514.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=198bp
MDQQPFVLPPLGFGAQISLSNPLTIPVSFRLETCGPFAINPTPSKKRLHN
GKKTAQRCFSGADGGAKCPDGNQHSHHRGAPEGGGSSPKCRRAAATRDRA
VEDSGAADAVAAGVPKPATRRPAKHQQQGQEVVLLPGRNLQLELVFMPSR
SPEMSESLVSSFSPGRENIPKLIFRTSGELHIAFSTGHVQAVLLRGEV
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