prot_L-elsbetiae_contig13208.2506.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13208.2506.1
Unique Nameprot_L-elsbetiae_contig13208.2506.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length205
Homology
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BLAST of mRNA_L-elsbetiae_contig13208.2506.1 vs. uniprot
Match: D8LSI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI8_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 2.790e-22
Identity = 49/58 (84.48%), Postives = 54/58 (93.10%), Query Frame = 0 
Query:   69 GRCGNGTETATKMASAATPEAGFADGYGDYARFDGPSGLVAAEDGTLFVADTNNHLVQ 126
            GRCGNGTE+AT+MA+ ATPEAGFADG G YARFDGPSGL AAEDGTLFVADTNNHL++
Sbjct:  323 GRCGNGTESATRMAAEATPEAGFADGDGSYARFDGPSGLAAAEDGTLFVADTNNHLIR 380
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BLAST of mRNA_L-elsbetiae_contig13208.2506.1 vs. uniprot
Match: A0A7S2SQR7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQR7_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.680e-14
Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 0 
Query:   62 PFLRTWTGRCGNGTETATKMASAATPEAGFADGYGDYARFDGPSGLVAAEDGTLFVADTNNHLVQ 126
            P +  +TGRCGNGT +      AA PE G+ADG+GD ARFD P GL    DGT+FVADT NHL++
Sbjct:   35 PRVSCFTGRCGNGTVSYVATRHAAPPEPGYADGFGDVARFDSPGGLEVDGDGTIFVADTGNHLIR 99
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BLAST of mRNA_L-elsbetiae_contig13208.2506.1 vs. uniprot
Match: A0A6H5K8Y6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y6_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 2.260e-13
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 0 
Query:   81 MASAATPEAGFADGYGDYARFDGPSGLVAAEDGTLFVADTNNHLV 125
            MA+ ATPEAGFADG GD+ARFDGP GL A EDGTLFVADTNNHLV
Sbjct:    1 MAAEATPEAGFADGDGDFARFDGPWGLAATEDGTLFVADTNNHLV 45
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BLAST of mRNA_L-elsbetiae_contig13208.2506.1 vs. uniprot
Match: A0A2W5XDJ8_9BACT (Uncharacterized protein n=1 Tax=Candidatus Eremiobacteraeota bacterium TaxID=2052317 RepID=A0A2W5XDJ8_9BACT)

HSP 1 Score: 54.7 bits (130), Expect = 2.840e-5
Identity = 34/83 (40.96%), Postives = 44/83 (53.01%), Query Frame = 0 
Query:   88 EAGFADGYGDYARFDGPSGLVAAEDGTLFVADTNNHLVQNKHGVLFMRGFQTVYTRLPSCGRPKMLITPCGRNDQSRESTPFD 170
            + G+ DG G  ARF+GP+GL  A DGTL+VAD NNH ++     +  RG  + Y      GR  +     G ND  R S  FD
Sbjct:  108 QGGYRDGVGREARFNGPAGLAIARDGTLYVADANNHCIRR----IDARGGVSTYA-----GRADI----AGHNDGPRASATFD 177
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13208.2506.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LSI8_ECTSI2.790e-2284.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2SQR7_9STRA1.680e-1456.92Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6H5K8Y6_9PHAE2.260e-1384.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2W5XDJ8_9BACT2.840e-540.96Uncharacterized protein n=1 Tax=Candidatus Eremiob... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001258NHL repeatPFAMPF01436NHLcoord: 101..126
e-value: 7.1E-6
score: 25.8
IPR011042Six-bladed beta-propeller, TolB-likeGENE3D2.120.10.30coord: 70..127
e-value: 2.7E-8
score: 35.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13208contigL-elsbetiae_contig13208:4513..5127 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13208.2506.1mRNA_L-elsbetiae_contig13208.2506.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13208 4114..5196 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13208.2506.1 ID=prot_L-elsbetiae_contig13208.2506.1|Name=mRNA_L-elsbetiae_contig13208.2506.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=205bp
MTLGFDLHPSPEMFSGKSSNSRKDLAFSATDGSHGTSWEVIPLLFFRCTQ
RGLKTSILTLHPFLRTWTGRCGNGTETATKMASAATPEAGFADGYGDYAR
FDGPSGLVAAEDGTLFVADTNNHLVQNKHGVLFMRGFQTVYTRLPSCGRP
KMLITPCGRNDQSRESTPFDGLQNSTPWTMDKPIVHCFNNIIQGEPIDRH
CRIQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001258NHL_repeat
IPR0110426-blade_b-propeller_TolB-like