prot_L-elsbetiae_contig1320.2498.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1320.2498.1
Unique Nameprot_L-elsbetiae_contig1320.2498.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length59
Homology
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BLAST of mRNA_L-elsbetiae_contig1320.2498.1 vs. uniprot
Match: D7G3P2_ECTSI (Similar to ankyrin 3, epithelial isoform e isoform 19 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P2_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 6.590e-21
Identity = 41/59 (69.49%), Postives = 52/59 (88.14%), Query Frame = 0 
Query:    1 HLRQEPTLHHLELSLEVGNEAVVSLLLDLGAEADPEDHWQFGSLIFTPLHLAAKAGQAG 59
            HLRQEP  HHL+++L + ++A+VSLLL+LGA+ADPEDHW +G L FTP+HLAAKAGQAG
Sbjct:   84 HLRQEPEHHHLQVALRICDKAMVSLLLELGADADPEDHWTYGDLFFTPIHLAAKAGQAG 142
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BLAST of mRNA_L-elsbetiae_contig1320.2498.1 vs. uniprot
Match: A0A6H5L850_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L850_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 2.570e-10
Identity = 27/39 (69.23%), Postives = 35/39 (89.74%), Query Frame = 0 
Query:    1 HLRQEPTLHHLELSLEVGNEAVVSLLLDLGAEADPEDHW 39
            HLRQEP  HHL+++L +G+EA+VSLLL+LGA+A PEDHW
Sbjct:   66 HLRQEPEHHHLQVALGIGDEAIVSLLLELGADAGPEDHW 104
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1320.2498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3P2_ECTSI6.590e-2169.49Similar to ankyrin 3, epithelial isoform e isoform... [more]
A0A6H5L850_9PHAE2.570e-1069.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 3..59
e-value: 4.9E-6
score: 28.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 15..56
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 11..59
score: 10.285

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1320contigL-elsbetiae_contig1320:4413..4589 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1320.2498.1mRNA_L-elsbetiae_contig1320.2498.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1320 4412..4589 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1320.2498.1 ID=prot_L-elsbetiae_contig1320.2498.1|Name=mRNA_L-elsbetiae_contig1320.2498.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=59bp
HLRQEPTLHHLELSLEVGNEAVVSLLLDLGAEADPEDHWQFGSLIFTPLH
LAAKAGQAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom