prot_L-elsbetiae_contig13179.2486.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13179.2486.1
Unique Nameprot_L-elsbetiae_contig13179.2486.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length249
Homology
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BLAST of mRNA_L-elsbetiae_contig13179.2486.1 vs. uniprot
Match: A0A6H5K4M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M0_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 7.020e-5
Identity = 26/51 (50.98%), Postives = 37/51 (72.55%), Query Frame = 0 
Query:    1 MDVLVQSAAVELWKWSEFVQLRGVVSACSLESVTW-PTGLEELVLDADLDV 50
            M+ L+++AA+ELW WSE ++L+G + A SL S  W P  L +LVL ADLD+
Sbjct: 1125 MESLLRTAAIELWTWSECLELQGSLCAASLRSANWWPRRLTQLVLKADLDI 1175
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13179.2486.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K4M0_9PHAE7.020e-550.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 202..239
e-value: 7.9E-5
score: 22.7
coord: 92..133
e-value: 3.4E-7
score: 30.3
NoneNo IPR availablePANTHERPTHR32134:SF132coord: 80..241
NoneNo IPR availablePANTHERPTHR32134:SF132coord: 26..139
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 26..139
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 80..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13179contigL-elsbetiae_contig13179:3870..4616 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13179.2486.1mRNA_L-elsbetiae_contig13179.2486.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13179 3579..4704 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13179.2486.1 ID=prot_L-elsbetiae_contig13179.2486.1|Name=mRNA_L-elsbetiae_contig13179.2486.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=249bp
MDVLVQSAAVELWKWSEFVQLRGVVSACSLESVTWPTGLEELVLDADLDV
SVEAVVWPSSLERLVFGAHFNKPVIGALWPAFLRQLSFGDGFSQPIAEVV
WPSSLQQLSFDGDFNQPIAEAVWPASLQQLSFGRLFNKPVIGTVWPSLLQ
KLSLGTYFDQLIAGVVWPVSLQQPSFGYRFNQSIAEVVWPASLKQLSFGG
QFNQPITGVVWPTSLQQLSFGAWFNQPIAGVVWPASLRSVTRQGIRII*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP