prot_L-elsbetiae_contig13170.2483.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13170.2483.1
Unique Nameprot_L-elsbetiae_contig13170.2483.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length86
Homology
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BLAST of mRNA_L-elsbetiae_contig13170.2483.1 vs. uniprot
Match: A0A6H5L089_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L089_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 7.010e-9
Identity = 27/76 (35.53%), Postives = 47/76 (61.84%), Query Frame = 0 
Query:    1 WGILRDWVLPSTVPQKRLLRAQLHSVECPVGSHPHTYFAAFDRICNMLKEVGDKIGEQEKLQAMIEQLPEEYAIQK 76
            W  +R+W LP+T  ++RLL  QL +VE   G +P  +FA  D I N ++ VG +  E++ +Q ++ QL  +Y +++
Sbjct:  474 WTAIREWSLPTTDAEQRLLERQLETVEMSPGENPKLFFARVDGIVNTMRAVGIEKSERQIVQTIVRQLSSDYDVER 549
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13170.2483.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L089_9PHAE7.010e-935.53Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 4..78
e-value: 2.2E-9
score: 37.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13170contigL-elsbetiae_contig13170:3672..3929 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13170.2483.1mRNA_L-elsbetiae_contig13170.2483.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13170 3672..3929 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13170.2483.1 ID=prot_L-elsbetiae_contig13170.2483.1|Name=mRNA_L-elsbetiae_contig13170.2483.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=86bp
WGILRDWVLPSTVPQKRLLRAQLHSVECPVGSHPHTYFAAFDRICNMLKE
VGDKIGEQEKLQAMIEQLPEEYAIQKAILQDKAGVT
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