prot_L-elsbetiae_contig1317.2482.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1317.2482.1
Unique Nameprot_L-elsbetiae_contig1317.2482.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length86
Homology
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BLAST of mRNA_L-elsbetiae_contig1317.2482.1 vs. uniprot
Match: A0A6H5L8S0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8S0_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 2.700e-10
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0 
Query:    1 MTKRRVPLENRDEETSLSDVQQLAKLLTHQLSELQRS 37
            MTKR+VPLENRDEETSLSDVQQLAKLLTHQLSELQ S
Sbjct:  261 MTKRQVPLENRDEETSLSDVQQLAKLLTHQLSELQDS 297
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1317.2482.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L8S0_9PHAE2.700e-1094.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 17..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1317contigL-elsbetiae_contig1317:25678..26300 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1317.2482.1mRNA_L-elsbetiae_contig1317.2482.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1317 25585..26319 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1317.2482.1 ID=prot_L-elsbetiae_contig1317.2482.1|Name=mRNA_L-elsbetiae_contig1317.2482.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=86bp
MTKRRVPLENRDEETSLSDVQQLAKLLTHQLSELQRSDEDGGGGGGNRQA
SKQRGPSRSVLAGATCSASANGTIPEGVEDGETES*
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