prot_L-elsbetiae_contig1314.2463.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1314.2463.1
Unique Nameprot_L-elsbetiae_contig1314.2463.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length412
Homology
BLAST of mRNA_L-elsbetiae_contig1314.2463.1 vs. uniprot
Match: D7FGT4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT4_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 2.390e-45
Identity = 157/416 (37.74%), Postives = 199/416 (47.84%), Query Frame = 0
Query:    1 AALLCSEYSIAHSLMGYCHSRLGMGKKAVVNYNIALELNPADVSSQGLLAEAKESLISAGETVKAIEALEAPFVAK--REQEAAAIQAAADAAMAVPAMHKRYLDGEEGADGIQEIVKKAGMPITGYRSPEKNLAGQSSSDIASRVKNAPEKPKRLSRKLSS--DAFASLTKIPGKLKHALSKKNRGSSSPKDYGQG-QH---LDSNFQGLYLHVEEDAACARVQAIYQEDGSALGAPEAFVADAQQGAP----NPLFCADRNRQ------STPPNA------VPATRDVSFAGSCCIGVGSGGGMA--------------------RVFCATEPSAGGPVVQESSSGNGGGPAVPTRDAXXXXXXXXXXXXXXXXXXXXXXXXXX----AHNAGEQRPGAHAAVALQL-DRSRRK 367
            AA+LC++YSIAHSLMGYCHSRLG+ KKAVVNY++ALELNP DVSSQ LLAEAK+SL++AGET +A++ALEAPFV+K  R QE AAI+AA  AA+ +P  H+RYLD    A  I+ +V                                     RL+RKLSS   A ASLT++PGKLKH + KK RG S+    G G QH   + S+F GL+     D   A   A     G++   P      + +G P    NPLF A   R+        P NA      V +  DV   G    G G  GG+                             +AGG  ++ S SG GG     TR                                A   G++RPGAH ++A QL D +RRK
Sbjct:  118 AAVLCADYSIAHSLMGYCHSRLGLDKKAVVNYHMALELNPMDVSSQSLLAEAKKSLLAAGETPEAVDALEAPFVSKSARNQEEAAIEAAVAAALEMPVKHRRYLDHTGRAASIEAMV-------------------------------------RLARKLSSGAQALASLTQLPGKLKHTIGKKARGQSTSSSRGVGLQHSPPMGSDFAGLFRDDSFDGVPAPRSAA-PTPGTSAAPPSTAGKSSSRGVPQEGSNPLFNAGDVRRLRYGLYGGPGNASGAVSRVSSAPDVRLIGHPRAGGGDSGGVVGXXXXXXXXXXXXXXXXXXXHXXXXXXXAAGGRALRSSVSG-GGATDPDTRGGRQLQHQQKNKQQNKPRSRGASLEATPRTAPAKATGDRRPGAHTSLARQLEDMARRK 494          
BLAST of mRNA_L-elsbetiae_contig1314.2463.1 vs. uniprot
Match: A0A6H5K662_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K662_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 3.680e-42
Identity = 154/444 (34.68%), Postives = 201/444 (45.27%), Query Frame = 0
Query:    1 AALLCSEYSIAHSLMGYCHSRLGMGKKAVVNYNIALELNPADVSSQGLLAEAKESLISAGETVKAIEALEAPFVAK--REQEAAAIQAAADAAMAVPAMHKRYLDGEEGADGIQEIVKKAGMPITGYRSPEKNLAGQSSSDIASRVKNAPEKPKRLSRKLSS--DAFASLTKIPGKLKHALSKKNRGSSSPKDYG----QGQHLDSNFQGLYLHVEEDAACARVQAIYQEDGSALGAPEAFVADAQ---QGAPNPLFCADRNRQ------STPPNA------VPATRDVSFAGSCCIGVGSGG-----------------------GMARVFCATEPSAGGPVVQESSSGNGGGPAVPTRDAXXXXXXXXXXXXXXXXXXXXXXXXXXAHNA-----GEQRPGAHAAVALQLDRSRRKGKNRQKREGCRRSADETSETSGGRAT 393
            AA+LC++Y IAHSLMGYCHSRLG+ KKAVVNY++ALELNP DVSSQGLLAEAK+SL++AGET +A++ALEAPFV+K  R +E A I+A   AA+ +P  H+RYLD    A  I+ +V                                      L RK+SS   A ASLT++PGKLKH + KK  G S+    G       H+ S+F GL+L    D A     A                + A+   Q   NPLF     R+       +P NA      V +  DV   G    G G  G                       G   V  A + +AGG  ++  SSG+GGG   P                                 A     G++RPGAH ++A QL+   R+     +R+G   S  E + T  G AT
Sbjct:  118 AAVLCADYPIAHSLMGYCHSRLGLDKKAVVNYHMALELNPKDVSSQGLLAEAKKSLLAAGETPEAVDALEAPFVSKSARNREEAEIEAVVAAALEMPVKHRRYLDNTGRAASIEAMVS-------------------------------------LRRKISSGAQALASLTQLPGKLKHTIGKKAWGRSTSSSRGVSLEHSPHMGSDFAGLFLDDSFDGAPGPRSAAXXXXXXXXXXXXXXXSPARGVPQEGSNPLFNDGDLRRLRNGLYGSPGNASGTVNRVSSAPDVRLIGQPPAGGGDSGXXXXXXXXXXXXXXXXXXXXXXAGSRHVGGAGQSAAGGRALR--SSGSGGGATDPDTRGGRQLQHQQKNKQQNEPRSRGASLEATPRTAPAKATGDRRPGAHTSLARQLEDMARRKDATNRRQGEAASGTEGAGTPAGTAT 522          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1314.2463.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FGT4_ECTSI2.390e-4537.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K662_9PHAE3.680e-4234.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 9..42
e-value: 0.0033
score: 26.7
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 9..42
score: 8.113
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..94
e-value: 5.5E-6
score: 28.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 5..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1314contigL-elsbetiae_contig1314:21226..25483 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1314.2463.1mRNA_L-elsbetiae_contig1314.2463.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1314 21226..25483 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1314.2463.1 ID=prot_L-elsbetiae_contig1314.2463.1|Name=mRNA_L-elsbetiae_contig1314.2463.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=412bp
AALLCSEYSIAHSLMGYCHSRLGMGKKAVVNYNIALELNPADVSSQGLLA
EAKESLISAGETVKAIEALEAPFVAKREQEAAAIQAAADAAMAVPAMHKR
YLDGEEGADGIQEIVKKAGMPITGYRSPEKNLAGQSSSDIASRVKNAPEK
PKRLSRKLSSDAFASLTKIPGKLKHALSKKNRGSSSPKDYGQGQHLDSNF
QGLYLHVEEDAACARVQAIYQEDGSALGAPEAFVADAQQGAPNPLFCADR
NRQSTPPNAVPATRDVSFAGSCCIGVGSGGGMARVFCATEPSAGGPVVQE
SSSGNGGGPAVPTRDARQQRRQQHERPQRPGLPPETPSRARRAHNAGEQR
PGAHAAVALQLDRSRRKGKNRQKREGCRRSADETSETSGGRATPSLTPPS
ALEDGSGATPSL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf