prot_L-elsbetiae_contig13129.2458.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13129.2458.1
Unique Nameprot_L-elsbetiae_contig13129.2458.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length57
Homology
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BLAST of mRNA_L-elsbetiae_contig13129.2458.1 vs. uniprot
Match: D7FTC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC4_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 1.840e-13
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 0 
Query:    1 LDQDPVFRVRKATALNLDKIIKVVGEAGISRLLPAYVRLT 40
            L +DPVFRVRKATALNLDKI KVVGEAGI+RLLPAY+RLT
Sbjct:  191 LSEDPVFRVRKATALNLDKICKVVGEAGIARLLPAYLRLT 230
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BLAST of mRNA_L-elsbetiae_contig13129.2458.1 vs. uniprot
Match: A0A6H5JCV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV5_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 2.870e-13
Identity = 35/39 (89.74%), Postives = 37/39 (94.87%), Query Frame = 0 
Query:    1 LDQDPVFRVRKATALNLDKIIKVVGEAGISRLLPAYVRL 39
            L +DPVFRVRKATALNLDKI KVVGEAGI+RLLPAYVRL
Sbjct:  191 LSEDPVFRVRKATALNLDKICKVVGEAGIARLLPAYVRL 229
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BLAST of mRNA_L-elsbetiae_contig13129.2458.1 vs. uniprot
Match: A0A2R5GM29_9STRA (Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GM29_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.730e-7
Identity = 27/49 (55.10%), Postives = 37/49 (75.51%), Query Frame = 0 
Query:    1 LDQDPVFRVRKATALNLDKIIKVVGEAGISRLLPAYVRLTKDDVYRVRR 49
            L QDP F+VRKA AL++DKI++V     + RLLPAY RL+KD ++ VR+
Sbjct:  219 LSQDPSFKVRKAVALSMDKIMRVAHTCSV-RLLPAYERLSKDSIWGVRK 266
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BLAST of mRNA_L-elsbetiae_contig13129.2458.1 vs. uniprot
Match: A0A836CCL0_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCL0_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 9.130e-5
Identity = 25/37 (67.57%), Postives = 28/37 (75.68%), Query Frame = 0 
Query:    1 LDQDPVFRVRKATALNLDKIIKVVGEAGI-SRLLPAY 36
            L +DPVFRVRKATALNL  + +VVG A    RLLPAY
Sbjct:   23 LGEDPVFRVRKATALNLHNVCRVVGAADSRDRLLPAY 59
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13129.2458.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FTC4_ECTSI1.840e-1387.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCV5_9PHAE2.870e-1389.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2R5GM29_9STRA1.730e-755.10Serine/threonine-protein phosphatase 2A 65 kDa reg... [more]
A0A836CCL0_9STRA9.130e-567.57Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..50
e-value: 2.6E-5
score: 25.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13129contigL-elsbetiae_contig13129:4732..4902 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13129.2458.1mRNA_L-elsbetiae_contig13129.2458.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13129 4732..4902 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13129.2458.1 ID=prot_L-elsbetiae_contig13129.2458.1|Name=mRNA_L-elsbetiae_contig13129.2458.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=57bp
LDQDPVFRVRKATALNLDKIIKVVGEAGISRLLPAYVRLTKDDVYRVRRG
EESRGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like