prot_L-elsbetiae_contig1312.2453.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1312.2453.1
Unique Nameprot_L-elsbetiae_contig1312.2453.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length815
Homology
BLAST of mRNA_L-elsbetiae_contig1312.2453.1 vs. uniprot
Match: D7FI85_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI85_ECTSI)

HSP 1 Score: 546 bits (1407), Expect = 2.870e-178
Identity = 610/892 (68.39%), Postives = 657/892 (73.65%), Query Frame = 0
Query:    1 MVNRYVLVKADGEGPKPCAFFASAAGCRNAAGCKFLHGDQPTAGSLAAKAQ---------------------------------GATTTKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------ADQTLSKTKAKKQAFREKAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXX-PVFHSMPPMSTPAXXXX-AKAARPTTRVCSFFNKKKGCQIGALCPFLHQGVEGGGFGGTRGHAKP---------------TPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPAVPATMPALPFAAPXXXXXXXXXXXXXXXXXXXXPSESPPSR-PTRKRGRPETPVAAAGAGAGLFDGLPISLFVAPGAAVPAVTTSKEE-PAKAAA---PAGIPHPKADIWQGLVERTRAHPKYAKNYRFEADASWITASPCGEGCAGLPQVVALDCEMCMSEDPLSKKRNGKDLLRLSIVRGEDGQKLMDTLVRPSDPVVDWRTDIHGVSPQHMEGVMFTHRHAQVAISRICCQHTVIIGHALNNDLKALKMAHNRVVDTSFLFEGTDRKFSTPSLKDVVKVALKRDIQDGSHDSVIDAQSTLDAARYVLDNAGAPLPTVVRTKKSGRGLRH---------KKKARGLVDEGEKRDDKIRKEEKEERSLLVHRLPAGTTQDQLLKVMQKKTKVVSLEAQPVDFTGGGTGKSRV 815
            M NRYVLV++DG+GPKPCAF+ASAAGCRNAA CKFLHGDQPTAGSL+AK+Q                                  AT  + XXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXXXXX             A QTLS TKAKKQAFREKAAR   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        PVF  MP MSTPA     A A+RPTTRVCSFFNKKKGCQ+GALCP+LHQGVE GGFGGTRGHAKP               +P A  XXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXX               AP                     +ESP SR                    G+FDGLPIS FVA      A    KEE PA  AA   PA IPHPKAD+WQGLVERTRAHPK+AKNY FE DA+W+TASPCG+ C GLPQV+ALDCEMCMSEDPLSK+RNGK+LLRLSIVRGEDG+KLMDTLVRP +PVVDWRTDIHGV+P+H+EGVMFTHRHAQVAISRICC HTVIIGHALNNDL ALKM H+RVVDTSFLFEG+D KFSTPSLKDVVKVAL R IQDGSHDSV DA+STL+ ARY L+  GAPLP + RTKK+ R             +KK RGL +  +  D +  K EKE RSL+VHRLPAGTT +QL++VMQKKTKV++ EA+ ++FTG  TGK+ V
Sbjct:    1 MANRYVLVRSDGDGPKPCAFYASAAGCRNAASCKFLHGDQPTAGSLSAKSQPPPAXXXXXXXXXXXXXXXXXXXXXXXXSANGHSATVEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTPAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGQTLSTTKAKKQAFREKAARKAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVGGLPLPVFRQMPKMSTPATPPLPATASRPTTRVCSFFNKKKGCQVGALCPYLHQGVERGGFGGTRGHAKPPTATVPXXXXXXXPASPVAVAXXXXXXXXXXXXXXXXXXASSPVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQAVPAPTAVDGGAA-------------TESPSSRRXXXXXXXXXXXXXXXXXXXGIFDGLPISPFVA------AADKDKEEKPAAVAAVVAPASIPHPKADVWQGLVERTRAHPKFAKNYSFETDATWVTASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDGEKLMDTLVRPGNPVVDWRTDIHGVAPEHLEGVMFTHRHAQVAISRICCPHTVIIGHALNNDLSALKMTHDRVVDTSFLFEGSDEKFSTPSLKDVVKVALGRHIQDGSHDSVTDAKSTLEVARYALEKVGAPLPPIDRTKKASRRWNGEGSSDDAGGRKKRRGLENGEDDADARAAKAEKERRSLMVHRLPAGTTPEQLMRVMQKKTKVIAQEAEGIEFTGT-TGKTHV 872          
BLAST of mRNA_L-elsbetiae_contig1312.2453.1 vs. uniprot
Match: A0A4D9CRL8_9STRA (C3H1-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRL8_9STRA)

HSP 1 Score: 217 bits (553), Expect = 4.600e-57
Identity = 129/294 (43.88%), Postives = 168/294 (57.14%), Query Frame = 0
Query:  521 WQGLVERTRAHPKYAKNYRFEA-----DASWITASPCGEGCAGLPQVVALDCEMCMSEDPLSKKRNGKDLLRLSIVRGEDG-QKLMDTLVRPSDPVVDWRTDIHGVSPQHMEGVMFTHRHAQVAISRICCQHTVIIGHALNNDLKALKMAHNRVVDTSFLFEGTDRKFSTPSLKDVVKVALKRDIQDGSHDSVIDAQSTLDAARYVLDNAG-APLPTVVRTKKSGRGLRHKKKARGLVDEGEKRDDKIRKEEKEERSLLVHRLPAGTTQDQLLKVMQKKTKVVSLEAQPVDFTG 807
            W G V+ T  H ++  NYR  A     +A WI A   G  C  LP V+ALDCEMC + DP+S +++GK L+RLS+V G D  Q L+DTLV PS PV+D+RTDIHG+ P+ +  VMFT RHAQ A+  +CC  TV+IGH L NDL ALKM H+RVVDT+ LFE  D    TP+LKDV    L  D+ D  HDSV DAQ TL  AR+ LD    AP+P +                          + K R+ E  +  LL+HR+P+  T   +  + Q +T V  +   PV  +G
Sbjct:  317 WTGCVKATMEHARFEANYRALAAQKKGEADWIEAKKHGAWCRDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLVLPSLPVIDYRTDIHGIRPEDLRQVMFTFRHAQAAMLHLCCTETVLIGHGLCNDLTALKMKHSRVVDTALLFEREDAPNHTPALKDVASALLGLDMAD-MHDSVADAQVTLRIARHFLDRGPVAPVPRLPAAP----------------------NKKGRRAEAVQSCLLLHRIPSFVTAAHIKDMFQTRTHVAPVTVDPVATSG 587          
BLAST of mRNA_L-elsbetiae_contig1312.2453.1 vs. uniprot
Match: A0A1E7FWM9_9STRA (C3H1-type domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWM9_9STRA)

HSP 1 Score: 193 bits (491), Expect = 3.480e-49
Identity = 120/306 (39.22%), Postives = 167/306 (54.58%), Query Frame = 0
Query:  521 WQGLVERTRAHPKYAKNYRF----EADA------SWITASPCGEGCAGLPQVVALDCEMCMSEDPLSKKRNGKDLLRLSIVRGEDGQK-LMDTLVRPSDPVVDWRTDIHGVSPQHMEGVMFTHRHAQVAISRICCQHTVIIGHALNNDLKALKMAHNRVVDTSFLFEGTDRKFSTPSLKDVVKVALKRDIQDGSHDSVIDAQSTLDAARYVLDNAGAPLPTVVRTKKSGRGLRHKKKARGLVDEGEKRDDKIRKEEKEERSLLVHRLPAGTTQDQLLKVMQKKTKVVSLEAQPVDFTGGGTGKSRV 815
            WQ  V  +R H +Y  ++ F    E DA      SWI A   G  CA  PQ +A+DCEMC S+DPLS  +N K L RLS+V  E  ++ L+DTLV+PS PV D+RT I+GV+ +H++ V FT RHAQ  +  +C + TVI+GHAL+NDL AL M H+ V D+SFLF   D   +TPSLKD V    K+++   +HDSV D++  L+   + +DN G  + +V RT K                            +KE   L VHR+P     + L  +  K T +   E + + F+G   GK+ V
Sbjct:  251 WQNAVIESRKHARYNNSFDFNRYQENDAKNGIQSSWIKAKAYGSWCASNPQAIAIDCEMCESQDPLSGAKNAKALCRLSVVNAEKPEEVLLDTLVKPSWPVTDYRTRINGVTKEHLDPVEFTLRHAQAFMMALCNEETVIVGHALHNDLVALNMEHDVVADSSFLFHAKDNPTATPSLKDTVMTMFKKEMPQ-THDSVNDSRKALECVMHWVDNDGK-VESVERTAKYPN-------------------------KKEGNQLFVHRIPKVCKAEHLSNMFLKTTNIQPTEVEEIQFSGS-LGKTHV 528          
BLAST of mRNA_L-elsbetiae_contig1312.2453.1 vs. uniprot
Match: A0A836CAS9_9STRA (Ribonuclease H-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAS9_9STRA)

HSP 1 Score: 182 bits (463), Expect = 7.270e-49
Identity = 108/234 (46.15%), Postives = 142/234 (60.68%), Query Frame = 0
Query:  549 ASPCGEG-CAGLPQVVALDCEMCMSEDPLSKKRNGKDLLRLSIVRGEDGQKLMDTLVRPSDPVVDWRTDIHGVSPQHMEGVMFTHRHAQVAISRICCQHTVIIGHALNNDLKALKMAHNRVVDTSFLF--EGTDRKFSTPSLKDVVKVALKRDIQDGSHDSVIDAQSTLDAARYVLDNAGAPLPTVVRTKKSGRGLRHKKKARGLVDEGEKRDDKIRKEEKEERSLLVHRLPAG 779
            AS C +  C+ LPQV+ALDCEMC + D  +  R+GK L+R+SIV G  G  L+DTLV P   VVD RT  HG++P+H+    FT  HAQ A++R+CC  TV++GHAL+NDL+AL M H RVVDTSFLF  EG +   +TPSL+D+ K  L ++IQ GSH SV DA + L+ A++ LD     LP + R    G     K K  G+  +                 LLVHR+P G
Sbjct:   14 ASECKKARCSALPQVLALDCEMCETVDDATGARDGKALVRMSIVDGA-GTPLLDTLVAPRGRVVDMRTSCHGITPEHLRDCRFTLAHAQAAVARLCCPGTVLVGHALHNDLQALGMVHERVVDTSFLFALEG-EGPSATPSLRDLAKAVLDKEIQSGSHSSVTDAVTALEVAQFALDRGAEALPLIKRGCGGG-----KPKNAGMRAQ-----------------LLVHRIPLG 223          
BLAST of mRNA_L-elsbetiae_contig1312.2453.1 vs. uniprot
Match: A0A448Z8R7_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8R7_9STRA)

HSP 1 Score: 191 bits (484), Expect = 1.760e-48
Identity = 124/375 (33.07%), Postives = 191/375 (50.93%), Query Frame = 0
Query:  466 ETPVAAAGAGAGLFDGLPISLFVAPGAAVPAVTTSKEE----PAKAAAPAGIPHPKADI----------WQGLVERTRAHPKYAKNYRFEA----------DASWITASPCGEGCAGLPQVVALDCEMCMSEDPLSKKRNGKDLLRLSIVRGEDGQK-LMDTLVRPSDPVVDWRTDIHGVSPQHMEGVMFTHRHAQVAISRICCQHTVIIGHALNNDLKALKMAHNRVVDTSFLFEGTDRKFSTPSLKDVVKVALKRDIQDGSHDSVIDAQSTLDAARYVLDNAGAPLPTVVRTKKSGRGLRHKKKARGLVDEGEKRDDKIRKEEKEERSLLVHRLPAGTTQDQLLKVMQKKTKVVSLEAQPVDFTGGGTGKSRV 815
            + P A+  + +     LP++ F  PG   P     KE     P KA      P  K  I          WQ  +  TR H +Y  ++ F+           +A+W  A P G  C   PQ +A+DCEMC ++DPL+  +N K L R+S+V  E+ ++ L+DTLV+P+ PV D+R+ I+G+  +H++ V FT RHAQ  + ++C Q TVI+GHA++NDL +LKM H+ + D+SFLF   D   ++PSLKD VK  LK+D+ + +HDSV DA+  L+     + N G                         V+E E+      K  K    L +HR+P    ++ L  +  K T +  ++ + + F G  +GK+ V
Sbjct:  150 QQPAASTNSFSSFVSNLPVAAFSIPGVTTP---VKKEPEVVAPTKAXEEKKTPKKKGKILPTSTAVGRKWQKSIIETRKHDRYDNSHNFDRYKELDAENNIEATWFKAKPYGPWCESNPQAIAIDCEMCETQDPLTGGKNSKALCRISVVNAENPEEVLLDTLVKPAWPVTDYRSRINGIKKEHLDXVEFTLRHAQAFMLKLCSQETVIVGHAVSNDLVSLKMEHDVISDSSFLFRAKDAPTASPSLKDCVKTILKKDMPE-THDSVNDARKALECVLEWIKNDGK------------------------VEEIER----TAKFPKTGHQLFIHRIPKECKEEHLTSMFLKHTTIEPIDIEEIQFAGN-SGKTHV 491          
BLAST of mRNA_L-elsbetiae_contig1312.2453.1 vs. uniprot
Match: A0A7R9Y9T2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9T2_9STRA)

HSP 1 Score: 192 bits (488), Expect = 2.540e-48
Identity = 104/275 (37.82%), Postives = 169/275 (61.45%), Query Frame = 0
Query:  521 WQGLVERTRAHPKYAKNYRFEADASWITASPCGEGCAGLPQVVALDCEMCMSEDPLSKKRNGKDLLRLSIVRGEDGQK-LMDTLVRPSDPVVDWRTDIHGVSPQHMEGVMFTHRHAQVAISRICCQHTVIIGHALNNDLKALKMAHNRVVDTSFLFEGTDRKFSTPSLKDVVKVALKRDIQDGSHDSVIDAQSTLDAARYVLDNAGAPLPTVVRTKKSGRGLRHKKKARGLVDEGEKRDDKIRKEEKEERSLLVHRLPAGTTQDQLLKVMQKKTK 794
            W+ L ++   H K+   + F+ D+SW+     G+ C  LPQ +A+DCEMC  +DP++ + + K L R S+V GE G+  L+DTLV+P  PV D+RTDIHG++ + +EGV FT RHAQ A+  IC   T+IIGHA++NDL +L+ AH+++VDT+ L++    + +TP+L+D+    +K+D+ +  HDS+IDA+  L  A ++L+        +V        LR K++ R    +G+    K R++  +  +LLVHR+P    +  L+K+  +  K
Sbjct:  386 WEKLRKKCSRHRKFETLFSFDTDSSWVRPREYGDWCKDLPQYIAIDCEMCGGKDPVTGEIDAKVLCRFSVVSGEGGKDVLIDTLVQPHMPVQDYRTDIHGITKEQLEGVPFTLRHAQAAMRSICSSKTIIIGHAVHNDLVSLRFAHDQIVDTALLYKLKGSERATPALRDISSTVIKQDMPE-PHDSIIDARCALLGAEHLLNVKNIEEEAIVERAPQST-LRRKRRQR----DGQSPAHKRRRQTNDPAALLVHRIPKTCAKRHLMKMFLRYAK 654          
BLAST of mRNA_L-elsbetiae_contig1312.2453.1 vs. uniprot
Match: A0A7S2KAR6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KAR6_9STRA)

HSP 1 Score: 189 bits (481), Expect = 5.920e-48
Identity = 108/300 (36.00%), Postives = 168/300 (56.00%), Query Frame = 0
Query:  521 WQGLVERTRAHPKYAKNYRFEADAS----WITASPCGEGCAGLPQVVALDCEMCMSEDPLSKKRNGKDLLRLSIVRGED-GQKLMDTLVRPSDPVVDWRTDIHGVSPQHMEGVMFTHRHAQVAISRICCQHTVIIGHALNNDLKALKMAHNRVVDTSFLFEGTDRKFSTPSLKDVVKVALKRDIQDGSHDSVIDAQSTLDAARYVLDNAGAPLPTVVRTKKSGRGLRHKKKARGLVDEGEKRDDKIRKEEKEERSLLVHRLPAGTTQDQLLKVMQKKTKVVSLEAQPVDFTGGGTGKSRV 815
            W+ LV+ TR+HP+Y  +YRF   A     W+ A   G  CA  PQ +A+DCEMC ++ P +   N   L RLS++ G++  + L+DTLV+P  PV D+R+ I+G+  +H+  V FT +HAQ  +  +C   TVIIGHA++NDL+ALKM H   VD++F+ +  D + S PSLKD  K    +D+ +  HDSV DA+ +L+   + L+  G   P ++R+ +S    RHK                          L +HR+P   T + +  ++Q+ T +V    +P++F+  G GK+ V
Sbjct:  246 WKDLVQLTRSHPRYESSYRFSQTAEESDGWVRAKAFGSWCAAFPQSIAIDCEMCATKCPQTNTVNNSALCRLSVINGDNPSEVLIDTLVKPDWPVSDYRSRINGIKEEHLAEVQFTLKHAQEFMQALCSNETVIIGHAVHNDLEALKMEHYCCVDSAFILKVKDEEHSCPSLKDSAKTLFGKDMPE-IHDSVNDARVSLECVEHYLEKEGKVDP-IIRSVRSND--RHK--------------------------LFIHRIPKVCTVEHISAMIQQYTFIVPSTVEPIEFSSNGYGKTYV 515          
BLAST of mRNA_L-elsbetiae_contig1312.2453.1 vs. uniprot
Match: B5Y560_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y560_PHATC)

HSP 1 Score: 186 bits (471), Expect = 1.350e-46
Identity = 95/223 (42.60%), Postives = 138/223 (61.88%), Query Frame = 0
Query:  521 WQGLVERTRAHPKYAKNYRF------------EADASWITASPCGEGCAGLPQVVALDCEMCMSEDPLSKKRNGKDLLRLSIVRGEDGQKLMDTLVRPSDPVVDWRTDIHGVSPQHMEGVMFTHRHAQVAISRICCQHTVIIGHALNNDLKALKMAHNRVVDTSFLFEGTDRKFSTPSLKDVVKVALKRDIQDGSHDSVIDAQSTLDAARYVLDNAGAPLPTV 731
            W   +++ R H KYA  Y F            +  ++WI A P GE C G PQ +A+DCEMC +EDP+S K N KDL R+SIV  E+ + L+D+LV+PS PVVD+R+ I+G++ +H++GV FT RH Q  +  +C Q TVI+GHAL+NDL A++M H    D++ LF  +D + S+ SLKD+    LK+ + D  HDSV DA++      + ++  G   P V
Sbjct:  237 WMKAIQQARQHHKYATAYDFVKYKALDAEIGLDPSSTWIQAKPYGEWCKGFPQAIAIDCEMCETEDPVSGKHNAKDLCRVSIVNAENDEVLLDSLVKPSWPVVDYRSRINGITEEHLKGVQFTLRHTQAFLMALCSQETVILGHALHNDLAAMRMEHYCNADSANLFSASDSERSSVSLKDLASNVLKKTMPD-KHDSVNDARTAWKVLEHWVEKDGQVEPIV 458          
BLAST of mRNA_L-elsbetiae_contig1312.2453.1 vs. uniprot
Match: A0A7S4EFC5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EFC5_9STRA)

HSP 1 Score: 181 bits (458), Expect = 6.810e-45
Identity = 111/306 (36.27%), Postives = 169/306 (55.23%), Query Frame = 0
Query:  521 WQGLVERTRAHPKY------AKNYRFEAD----ASWITASPCGEGCAGLPQVVALDCEMCMSEDPLSKKRNGKDLLRLSIVRGEDGQK-LMDTLVRPSDPVVDWRTDIHGVSPQHMEGVMFTHRHAQVAISRICCQHTVIIGHALNNDLKALKMAHNRVVDTSFLFEGTDRKFSTPSLKDVVKVALKRDIQDGSHDSVIDAQSTLDAARYVLDNAGAPLPTVVRTKKSGRGLRHKKKARGLVDEGEKRDDKIRKEEKEERSLLVHRLPAGTTQDQLLKVMQKKTKVVSLEAQPVDFTGGGTGKSRV 815
            WQ  V  +R H +Y      A++ + + +    A+WI A P G  C   PQ +A+DCEMC S+DPLS  +N K L R+S+V  E  ++ L+DTLV+P+ PV D+RT I+G+  ++++ V FT RHAQ  + ++C + T+I+GHA+ NDL ALKM H+ V D+SFLF   D   S PSLKD VK  LK+++ + +HDSV DA+  L+     + N G  +  + RT +         KA G                     L +HR+P    +++L  +  K T +  +E   ++ +G   GK+ V
Sbjct:  229 WQKPVIESRKHERYSGAHDFARHKKLDTENGIGATWIKAKPYGSWCKSNPQAIAIDCEMCESQDPLSGAKNSKALCRISVVNAEKPEEVLLDTLVKPAWPVTDYRTRINGIKKENLDNVEFTLRHAQAFMLKLCSEETIIVGHAIVNDLVALKMEHDIVSDSSFLFRAKDSPNSCPSLKDCVKTILKKEMPE-THDSVNDARKALECVVEWVKNDGK-VEEIERTARP--------KANG-------------------HQLFIHRIPKICNEERLTTMFLKHTTIEPIEVDEIEISGS-YGKTHV 504          
BLAST of mRNA_L-elsbetiae_contig1312.2453.1 vs. uniprot
Match: A0A1Z5J806_FISSO (RNA exonuclease 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J806_FISSO)

HSP 1 Score: 170 bits (430), Expect = 6.830e-41
Identity = 103/313 (32.91%), Postives = 165/313 (52.72%), Query Frame = 0
Query:  515 HPKADIWQGLVERTRAHPKYAKNYRFE------------ADASWITASPCGEGCAGLPQVVALDCEMCMSEDPLSKKRNGKDLLRLSIVRGEDGQKLMDTLVRPSDPVVDWRTDIHGVSPQHMEGVMFTHRHAQVAISRICCQHTVIIGHALNNDLKALKMAHNRVVDTSFLFEGTDRKFSTPSLKDVVKVALKRDIQDGSHDSVIDAQSTLDAARYVLDNAGAPLPTVVRTKKSGRGLRHKKKARGLVDEGEKRDDKIRKEEKEERSLLVHRLPAGTTQDQLLKVMQKKTKVVSLEAQPVDFTGGGTGKSRV 815
            +P A  W   ++ T++   +A NY F             +   W+ A P G  C  LPQV+A+DCEMC ++DP+S  +N   L R+SIV     + L+D+L +P+ PV + R+ ++G++ +H+E V FT RHAQ  +  +C + TVI+GHA++NDL A++M H  VVD++ LF+ TD + +T SLKD  K  L +D+ D +HDSV DA + L+   Y L   G+ + T+ R+  +         A+       +              L VHR+P    ++ L  +      +  L  + ++F G   GK+ V
Sbjct:  256 NPAAKKWINAIQTTQSSKAFAINYNFAKYKQKDEESGICSANGWVKAKPYGAWCEKLPQVIAIDCEMCETQDPVSGDKNFNALCRISIVDAVTKEVLLDSLCKPAWPVSNHRSWVNGITEEHLENVQFTVRHAQAFLMALCSEETVIVGHAVHNDLAAVRMEHYCVVDSALLFKATDSETATVSLKDSAKSILGKDMPD-THDSVNDALTALECLEYYLQK-GSDMKTIDRSSNTPSS------AKSFTFYASQ--------------LFVHRIPNTVNEEHLTNLFLAHADIKPLSVETIEFQGN-MGKTHV 545          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1312.2453.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI85_ECTSI2.870e-17868.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9CRL8_9STRA4.600e-5743.88C3H1-type domain-containing protein n=2 Tax=Monodo... [more]
A0A1E7FWM9_9STRA3.480e-4939.22C3H1-type domain-containing protein n=1 Tax=Fragil... [more]
A0A836CAS9_9STRA7.270e-4946.15Ribonuclease H-like domain-containing protein n=1 ... [more]
A0A448Z8R7_9STRA1.760e-4833.07Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7R9Y9T2_9STRA2.540e-4837.82Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S2KAR6_9STRA5.920e-4836.00Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B5Y560_PHATC1.350e-4642.60Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S4EFC5_9STRA6.810e-4536.27Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A1Z5J806_FISSO6.830e-4132.91RNA exonuclease 1 n=2 Tax=Fistulifera solaris TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 88..120
NoneNo IPR availablePANTHERPTHR12801EXONUCLEASEcoord: 540..741
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..27
score: 5.0
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 12..39
e-value: 2.9
score: 12.6
coord: 320..347
e-value: 0.54
score: 18.4
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 12..40
score: 11.16
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 320..348
score: 10.286
IPR013520Exonuclease, RNase T/DNA polymerase IIISMARTSM00479exoiiienduscoord: 561..726
e-value: 2.6E-26
score: 103.4
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 558..728
e-value: 6.3E-38
score: 132.0
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 560..718

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1312contigL-elsbetiae_contig1312:16249..26253 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1312.2453.1mRNA_L-elsbetiae_contig1312.2453.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1312 16249..26253 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1312.2453.1 ID=prot_L-elsbetiae_contig1312.2453.1|Name=mRNA_L-elsbetiae_contig1312.2453.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=815bp
MVNRYVLVKADGEGPKPCAFFASAAGCRNAAGCKFLHGDQPTAGSLAAKA
QGATTTKTKQTKPAPVAVTPAPTPAAPIAAAPVANGHAAAAEEEAERAAK
KKAKKKAKKEKEAREAAAAAAAAAAATAAAAPPPVAPAPLPVVSTPVPPT
SAVVVAAADQTLSKTKAKKQAFREKAARKAEAAAAAAAANAAAANATAAA
AAAAAASAVAAASASPPPAPPVAVPAAPAVVPTAVAPSPVAAAAAAALPV
SKKKKRKNKKKAAQAAAAAVATPAPTPGIPAPAVTPAPAAAAARGPPPPV
FHSMPPMSTPAPAPAAKAARPTTRVCSFFNKKKGCQIGALCPFLHQGVEG
GGFGGTRGHAKPTPAAAAVAAAVAPPPAAPVAVVAAAAAAAPKAKKAKTT
PPPVAAVDAAAAPAPAVPATMPALPFAAPPPPPSASSHAAAVVATAAGGP
SESPPSRPTRKRGRPETPVAAAGAGAGLFDGLPISLFVAPGAAVPAVTTS
KEEPAKAAAPAGIPHPKADIWQGLVERTRAHPKYAKNYRFEADASWITAS
PCGEGCAGLPQVVALDCEMCMSEDPLSKKRNGKDLLRLSIVRGEDGQKLM
DTLVRPSDPVVDWRTDIHGVSPQHMEGVMFTHRHAQVAISRICCQHTVII
GHALNNDLKALKMAHNRVVDTSFLFEGTDRKFSTPSLKDVVKVALKRDIQ
DGSHDSVIDAQSTLDAARYVLDNAGAPLPTVVRTKKSGRGLRHKKKARGL
VDEGEKRDDKIRKEEKEERSLLVHRLPAGTTQDQLLKVMQKKTKVVSLEA
QPVDFTGGGTGKSRV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf