prot_L-elsbetiae_contig1310.2444.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1310.2444.1
Unique Nameprot_L-elsbetiae_contig1310.2444.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length80
Homology
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BLAST of mRNA_L-elsbetiae_contig1310.2444.1 vs. uniprot
Match: D7FTN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN3_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 7.920e-14
Identity = 35/52 (67.31%), Postives = 44/52 (84.62%), Query Frame = 0 
Query:   29 VNSTNMSGATPLSCAIGGMGGEVGECAALLRAAGGVVRLVEETIAPGSIIDV 80
            +   +MSGATPLSCA+GG GG  GECA LLRA+GG+VRLV++TI+ GSI+DV
Sbjct:   46 IEGKHMSGATPLSCAMGGAGGPDGECATLLRASGGLVRLVKDTISSGSILDV 97
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BLAST of mRNA_L-elsbetiae_contig1310.2444.1 vs. uniprot
Match: M2RK87_TREDN (Uncharacterized protein n=1 Tax=Treponema denticola US-Trep TaxID=999440 RepID=M2RK87_TREDN)

HSP 1 Score: 50.1 bits (118), Expect = 1.830e-5
Identity = 22/42 (52.38%), Postives = 31/42 (73.81%), Query Frame = 0 
Query:    3 GFSALHIAATRNDPDTIRVLLNMKVDVNSTNMSGATPLSCAI 44
            G S LHIAA +NDP  +R+L+NM  D+ + N +GATPL+ A+
Sbjct:   66 GNSLLHIAAVKNDPIIVRLLINMDADIEAKNNTGATPLAAAL 107
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BLAST of mRNA_L-elsbetiae_contig1310.2444.1 vs. uniprot
Match: Q73J83_TREDE (Ankyrin repeat protein n=10 Tax=Treponema denticola TaxID=158 RepID=Q73J83_TREDE)

HSP 1 Score: 50.1 bits (118), Expect = 3.580e-5
Identity = 22/42 (52.38%), Postives = 31/42 (73.81%), Query Frame = 0 
Query:    3 GFSALHIAATRNDPDTIRVLLNMKVDVNSTNMSGATPLSCAI 44
            G S LHIAA +NDP  +R+L+NM  D+ + N +GATPL+ A+
Sbjct:   66 GNSLLHIAAVKNDPIIVRLLINMDADIEAKNNTGATPLAAAL 107
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1310.2444.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FTN3_ECTSI7.920e-1467.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
M2RK87_TREDN1.830e-552.38Uncharacterized protein n=1 Tax=Treponema denticol... [more]
Q73J83_TREDE3.580e-552.38Ankyrin repeat protein n=10 Tax=Treponema denticol... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 2..31
e-value: 7.3E-4
score: 28.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 2..34
score: 11.541
NoneNo IPR availableGENE3D1.25.40.960coord: 2..62
e-value: 1.9E-11
score: 45.7
NoneNo IPR availablePFAMPF13857Ank_5coord: 2..40
e-value: 1.9E-6
score: 28.0
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 2..44
score: 14.159
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1310contigL-elsbetiae_contig1310:20430..23249 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1310.2444.1mRNA_L-elsbetiae_contig1310.2444.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1310 20428..23249 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1310.2444.1 ID=prot_L-elsbetiae_contig1310.2444.1|Name=mRNA_L-elsbetiae_contig1310.2444.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=80bp
GSGFSALHIAATRNDPDTIRVLLNMKVDVNSTNMSGATPLSCAIGGMGGE
VGECAALLRAAGGVVRLVEETIAPGSIIDV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf