prot_L-elsbetiae_contig13066.2422.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13066.2422.1
Unique Nameprot_L-elsbetiae_contig13066.2422.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length82
Homology
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BLAST of mRNA_L-elsbetiae_contig13066.2422.1 vs. uniprot
Match: D7G845_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G845_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 6.260e-42
Identity = 76/79 (96.20%), Postives = 78/79 (98.73%), Query Frame = 0 
Query:    4 QSANPAWGLGAGGLLRGAHRLLLRYPAAQQLLENEQDRPGSGPFRADLSNPEHANALSSAAWELSLLRNSCEPAISAVA 82
            QSANPAWGLGAGGLLRGAHRLLLRYPAAQQLLENEQDRPGSGPFR DL+NPEHANALSSAAWELSLLRNSCEPAI+AVA
Sbjct:  741 QSANPAWGLGAGGLLRGAHRLLLRYPAAQQLLENEQDRPGSGPFRPDLTNPEHANALSSAAWELSLLRNSCEPAIAAVA 819
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13066.2422.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G845_ECTSI6.260e-4296.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005612CCAAT-binding factorPFAMPF03914CBFcoord: 21..82
e-value: 5.7E-8
score: 33.0
IPR016903Nucleolar complex-associated protein 3PANTHERPTHR14428NUCLEOLAR COMPLEX PROTEIN 3coord: 16..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13066contigL-elsbetiae_contig13066:4911..5156 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13066.2422.1mRNA_L-elsbetiae_contig13066.2422.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13066 4911..5156 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13066.2422.1 ID=prot_L-elsbetiae_contig13066.2422.1|Name=mRNA_L-elsbetiae_contig13066.2422.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=82bp
LAPQSANPAWGLGAGGLLRGAHRLLLRYPAAQQLLENEQDRPGSGPFRAD
LSNPEHANALSSAAWELSLLRNSCEPAISAVA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005612CCAAT-binding_factor
IPR016903Nucleolar_cplx-assoc_3