prot_L-elsbetiae_contig130.2378.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig130.2378.1
Unique Nameprot_L-elsbetiae_contig130.2378.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length244
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig130.2378.1 vs. uniprot
Match: A0A6H5JTC2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTC2_9PHAE)

HSP 1 Score: 350 bits (899), Expect = 7.070e-120
Identity = 190/252 (75.40%), Postives = 208/252 (82.54%), Query Frame = 0 
Query:    1 MSKSANAKSGATRELLCSRCYKRESCVQCCGTRYCLRHFHTSNHSSDHPRKAFVMNQRAFDEQLPAFQEMWREAFLSVTEDVDRLSQDVNKKVADDPLASIGMAVDPAPKGRDP---------ENPLGASSLATKRXXXXXXXXXXAAVALDPFARRRTRPKSYWSVGNELDSSTERGSSAADERAAAIAAAAPRIGEYQCESCESENTSFDIIGGAAVGTRKAETFGKKDAPELILRVLCHACGNNWLEER 243
            MS  A + SG  RELLCSRCYKRESCVQCCGTRYCLRHFHTSNHSSDHP+KA VMN+RA D+QLPAF+EMWREAF SV +DV RLS+DV+K+V DDPLASIGMA+ P   G+ P         ++   ASS     XXXXXXXXXX    +DPFARRRTRPKSYW+VG+ELD+  E   SAADERAAAIAAAAPR GEYQCESCES+NTSFDIIGGAAVGTRKAETFGKKDAPELILRVLCHACGNNWLEER
Sbjct:    1 MSGGAKSSSGTARELLCSRCYKRESCVQCCGTRYCLRHFHTSNHSSDHPQKAIVMNRRALDDQLPAFREMWREAFQSVADDVGRLSRDVSKRVEDDPLASIGMALKPVRNGKHPXXXXXXXXHQSSGSASSXXXXXXXXXXXXXXXXXXXVDPFARRRTRPKSYWAVGHELDAPEEAEGSAADERAAAIAAAAPRAGEYQCESCESDNTSFDIIGGAAVGTRKAETFGKKDAPELILRVLCHACGNNWLEER 252
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig130.2378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JTC2_9PHAE7.070e-12075.40Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig130contigL-elsbetiae_contig130:1192..3438 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig130.2378.1mRNA_L-elsbetiae_contig130.2378.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig130 1192..3438 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig130.2378.1 ID=prot_L-elsbetiae_contig130.2378.1|Name=mRNA_L-elsbetiae_contig130.2378.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=244bp
MSKSANAKSGATRELLCSRCYKRESCVQCCGTRYCLRHFHTSNHSSDHPR
KAFVMNQRAFDEQLPAFQEMWREAFLSVTEDVDRLSQDVNKKVADDPLAS
IGMAVDPAPKGRDPENPLGASSLATKRRRKEEQEKQAAAVALDPFARRRT
RPKSYWSVGNELDSSTERGSSAADERAAAIAAAAPRIGEYQCESCESENT
SFDIIGGAAVGTRKAETFGKKDAPELILRVLCHACGNNWLEER*
back to top