prot_L-elsbetiae_contig13.2374.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13.2374.1
Unique Nameprot_L-elsbetiae_contig13.2374.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length688
Homology
BLAST of mRNA_L-elsbetiae_contig13.2374.1 vs. uniprot
Match: A0A6H5KZW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZW5_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 1.130e-46
Identity = 225/596 (37.75%), Postives = 274/596 (45.97%), Query Frame = 0
Query:  173 VRFLGRCP-TSSPGCERAAGPELYDRHGGV------PLRRATKQRPGSALT------GNLKHQNREHDTHRYRLDEQRRD--VPSAGWGVRPTSASS------IPASFVAGCLDQVERTYEEVVVCRGSHRIVKGSVARHQKQPNQ---RQQDEGLSGRGSKGLGLLAGSSEGLWVCNGRSEGGDDDVG-----DRNQLDLAINPSPWGAFIGGPPG-ENTTLGRN-----------RKRPSSAPRPPSTTTNLAPGL-EVGSGRVQARPRSAHAASPSRNCATEVFVTTGYSICDEEDGSG----PKAVGAEIAIQKSASRSSRSGWPVRATDTVELG----GETDAGQPRQADRARLS----KSSCQQMAAGPDADLAVVARQAKIRT-MSPSKKAEAKGYNQKSGLRCKAGERIAVPTVSLHLARRTSSGTFSPRSLAQP----TPXXXXXXXXXXXXXXVSAVSNHKLLGLFGSALLP-------AENGTK-LPRNWKTERSALQPRKQEQPQPQERQRRIGTSAARTAKSGAERMHDGE-----------YVTSNFAP-VVLDRRTISSSEE-NGQRHVRSAGLVGKALRV 688
            +RF GR P +SSPG ER      +   GGV      P R+AT+ RP SALT      GN +   R       R D++RR   +P A WG R  +ASS      + A+  +G ++QVER+Y+EVVVCR   R++KGS AR QK       R    G  GR  K +GLL GSSE LW C GR              D   LDLAINPSPWGAF+GGPPG E T+  R            +KRPSSAPR   T T    G  E G GR + RPRSAHAASPSR  A   FV+  Y     E+        +    E    KSA R SR G  V A      G    G      P Q  +A ++       C       DA+L VVARQ + RT  SP+ K    G +  S +   AGE  A    S  +A      T  P S A+P    TP   XXXXXXXXXXX         LGL GSA++P       A  GT+  PR+     +                    T+ A   K    R  +GE           Y  S  AP VV D RT  +    +G+R  R++GLVGKALRV
Sbjct:    1 MRFFGRPPLSSSPGYEREE--TSFGSRGGVLRGACPPHRQATR-RPRSALTRRNPTSGNRRRGARSPSG--AREDQKRRGSPLPPAAWGFRNATASSATAAPAVKAAAASGGVEQVERSYQEVVVCRSRQRVIKGSAARRQKAEGPISGRVSGAGNGGRRDKWVGLLEGSSEALWTC-GRGXXXXXXXXXXXXXDARFLDLAINPSPWGAFVGGPPGIEKTSAARGGSGGSVQRQLCKKRPSSAPRQAPTATAPTTGRSEEGGGRTRTRPRSAHAASPSRQNAAGNFVSAAYGGGGRENEENCISLEETPHEETEKSKSARRGSRDGLSVTAGVDGTAGRTAQGTGGEAVPTQGSKAIIAGXXXXXXCHPGGVVQDAELVVVARQLQPRTAFSPANK----GSHHNSSVEKMAGETPAPAFSSRTIASGMFFNTQPPPSFARPMMPRTPAPSXXXXXXXXXXXXXXNKIGHTLGLTGSAIVPGVAAAPAAAGGTEPRPRHG----TXXXXXXXXXXXXXXXXXXXATTVAGWVKEAGGRWRNGENGSGNATATGRYGFSTTAPSVVPDSRTAKNVHGGSGRRRARASGLVGKALRV 582          
BLAST of mRNA_L-elsbetiae_contig13.2374.1 vs. uniprot
Match: D7FPT5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPT5_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 9.020e-37
Identity = 195/511 (38.16%), Postives = 229/511 (44.81%), Query Frame = 0
Query:  246 GVRPTSASSIPASFVAGCLDQVERTYEEVVVCRGSHRIVKGSVARHQKQPN----QRQQDEGLSGRGSKGLGLLAGSSEGLWVCNGRSEGGDD--------DVGDRNQLDLAINPSPWGAFIGGPPG-ENTTLGR-----------NRKRPSSAPRPPSTTTNLAPGLEVGSG-RVQARPRSAHAASPSRNCATEVFVTTGYSIC------DEED----GSGPKAVGAEIAIQKSASRSSRSGWPVRATDTVELGGETDA----GQPRQADR---ARLSKSSCQQMAAGPDADLAVVARQAKIRT-MSPSKKAEAKGYNQKSGLRCKAGERIAVPTVSLHLARRTSSGTFSPRSLAQP----TPXXXXXXXXXXXXXXVSAVSNHKLLGLFGSALLP-------AENGTK-LPRNWKTERSALQPRKQEQPQPQERQRRIGTSAARTAKSGAERMHDGE-----------YVTSNFAP-VVLDRRTISSSEE-NGQRHVRSAGLVGKALRV 688
            GV     S+ PA+  +G ++QVER+YEEVVVCR S R++KGS AR QK       +     G  GR  K +GLL G SE LW C     GG          D G R  LDLAINPSPWGAF+GGPPG E T   R           ++KRPSSAPR P                R + RPRSAHAASPSR  A   FVT            +EE+    G  P     E     SA R SR G  V A      GG          P Q  +   A      C       DA+L VVARQ + RT  SP  K     +N  SGL   AGE  A    S  +A      T  P SLA+P    TP XXXXXXXXXXXXX         LGL GSA++P       A  GT+  PR+                          T+ A   K    R   GE           YV S  AP VVLD RT +++   +G+R   ++GLVGKALRV
Sbjct:   11 GVESRKQSTGPAAAASGGIEQVERSYEEVVVCRSSQRVIKGSAARRQKAEGPISGRVSGGGGNDGRRDKWVGLLEGPSEALWTCG---RGGXXXXXXXXXTDDGARF-LDLAINPSPWGAFVGGPPGMEKTPAVRGGSGGSVQRQLSKKRPSSAPRQPXXXXXXXXXXXXXXXXRTRTRPRSAHAASPSRQNAAGTFVTAXXXXXXXXXRENEENCISLGETPHE---ETEKSNSARRGSRGGLSVPAGVDGTAGGTAQGTGGVAVPTQGGKEIFAGGGGGGCHPGGVVQDAELVVVARQLQPRTAFSPVNKGS--HHNNNSGLEKMAGETPAPAFSSRTIASGMLFDTQPPPSLARPMMPRTPAXXXXXXXXXXXXXXXXNKIGHTLGLTGSAIVPGVAAAPAAAGGTEPRPRH-----GTXXXXXXXXXXXXXXXXXTATTLAGWVKEAGGRWRSGENGSGNATATGRYVFSTIAPSVVLDSRTANNAHGGSGRRRAGASGLVGKALRV 507          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13.2374.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KZW5_9PHAE1.130e-4637.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPT5_ECTSI9.020e-3738.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13contigL-elsbetiae_contig13:53664..56869 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13.2374.1mRNA_L-elsbetiae_contig13.2374.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13 53664..56869 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13.2374.1 ID=prot_L-elsbetiae_contig13.2374.1|Name=mRNA_L-elsbetiae_contig13.2374.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=688bp
NRREPATCRVERSPVAQRRPASATIRVPYLPSHVRIYPLRPKRRPRSAAS
YMRSTFAIDSAFPAGTTSSTPHQQQELQRRRRLRGRASWQPEARPDDAKY
VLQEDARQGGNHRFIVSTVPRPRQGFGVRMPTAGKKRVVAGGGGEGGRPG
TAQQRSTGSERCRSRRPASAPQVRFLGRCPTSSPGCERAAGPELYDRHGG
VPLRRATKQRPGSALTGNLKHQNREHDTHRYRLDEQRRDVPSAGWGVRPT
SASSIPASFVAGCLDQVERTYEEVVVCRGSHRIVKGSVARHQKQPNQRQQ
DEGLSGRGSKGLGLLAGSSEGLWVCNGRSEGGDDDVGDRNQLDLAINPSP
WGAFIGGPPGENTTLGRNRKRPSSAPRPPSTTTNLAPGLEVGSGRVQARP
RSAHAASPSRNCATEVFVTTGYSICDEEDGSGPKAVGAEIAIQKSASRSS
RSGWPVRATDTVELGGETDAGQPRQADRARLSKSSCQQMAAGPDADLAVV
ARQAKIRTMSPSKKAEAKGYNQKSGLRCKAGERIAVPTVSLHLARRTSSG
TFSPRSLAQPTPPPAPPPPPPPPPPPVSAVSNHKLLGLFGSALLPAENGT
KLPRNWKTERSALQPRKQEQPQPQERQRRIGTSAARTAKSGAERMHDGEY
VTSNFAPVVLDRRTISSSEENGQRHVRSAGLVGKALRV
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