prot_L-elsbetiae_contig12994.2363.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12994.2363.1
Unique Nameprot_L-elsbetiae_contig12994.2363.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length253
Homology
BLAST of mRNA_L-elsbetiae_contig12994.2363.1 vs. uniprot
Match: D7FZE6_ECTSI (Eukaryotic translation initiation factor 3 subunit L n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZE6_ECTSI)

HSP 1 Score: 464 bits (1193), Expect = 2.320e-160
Identity = 239/253 (94.47%), Postives = 246/253 (97.23%), Query Frame = 0
Query:    1 MMRCAQAKKRPAANDAAVPAAPSQLHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNEVFAGNMLAFVTVHQHAGLAFLMLKRYKDAARILNEALVHVGRANRSGQLQRSGYQDEVPKTADKMMALMAIATSLAPGAKIDEQMQSKMQDTHRDKLAKMAAGDDQAFRDLFSWASPKFVCSVGSREFYDLQTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDVEQFSAQLVSMKHKLTQV 253
            +M   +AKKRPAAN  AVPAAPSQLHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNE+FAGNMLAFVTVHQHAGLAFLMLKRYKDAARIL+EALVHVGRANRSGQLQRSGYQDEVPKTADKMMALMAIATSLAPGAKIDEQMQSKMQDTHRDKLAKMA GDDQAFRDLFSWASPKFVCSVGSREFY++QTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLD EQFSAQLVSMKHKLTQ+
Sbjct:  208 IMPILEAKKRPAAN-VAVPAAPSQLHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNELFAGNMLAFVTVHQHAGLAFLMLKRYKDAARILSEALVHVGRANRSGQLQRSGYQDEVPKTADKMMALMAIATSLAPGAKIDEQMQSKMQDTHRDKLAKMAKGDDQAFRDLFSWASPKFVCSVGSREFYEMQTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDEEQFSAQLVSMKHKLTQM 459          
BLAST of mRNA_L-elsbetiae_contig12994.2363.1 vs. uniprot
Match: A0A835YSE4_9STRA (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSE4_9STRA)

HSP 1 Score: 251 bits (642), Expect = 9.460e-78
Identity = 128/252 (50.79%), Postives = 175/252 (69.44%), Query Frame = 0
Query:   16 AAVPAAPSQLHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNEVFAGNMLAFVTVHQHAGLAFLMLKRYKDAARILNEALVHVGRANRSGQLQRSGYQDEVPKTADKMMALMAIATSLAPGAKIDEQMQSKMQDTHRDKLAKMAAGDDQA---FRDLFSWASPKFVCSVGSREFYDL-----------QTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDVEQFSAQLVSMKHKLTQV 253
            A  P +PSQLHQM GY+ ++GMSRL CL+GDY++C+  L  +D+TD++++F  NM A+V+++ H GL+FLMLKRY+DAAR+L+E LVH+ RA ++GQLQ+ G + ++PK +DKMM L+AIA+ LAPG   DE +    QD+HRD+L +MA G D A    RDLF    PKF+  V S   Y +           Q QLF  E+ QQ+ FP++RSYLKLY TI + K+ARFN +    + A LVSMKHKLTQ+
Sbjct:  168 ATAPKSPSQLHQMMGYYGLIGMSRLHCLMGDYHQCLSTLAPLDVTDRSDLFGSNMHAYVSLYMHMGLSFLMLKRYRDAARVLSEILVHISRAAKTGQLQKPGME-QIPKQSDKMMCLLAIASFLAPGPAADETILQTAQDSHRDRLLRMADGGDNAENAVRDLFQMGCPKFI--VASVPDYSVVQNTSGACIQQQVQLFCHEMSQQLAFPKVRSYLKLYATISIAKMARFNGMSEADYLATLVSMKHKLTQL 416          
BLAST of mRNA_L-elsbetiae_contig12994.2363.1 vs. uniprot
Match: G3G5N9_9PHAE (Eukaryotic translation initiation factor 3 subunit 6 interacting protein (Fragment) n=93 Tax=Fucaceae TaxID=3010 RepID=G3G5N9_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 2.090e-68
Identity = 107/122 (87.70%), Postives = 117/122 (95.90%), Query Frame = 0
Query:  132 LMAIATSLAPGAKIDEQMQSKMQDTHRDKLAKMAAGDDQAFRDLFSWASPKFVCSVGSREFYDLQTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDVEQFSAQLVSMKHKLTQV 253
            LM IATSLAPGAKID+QMQ+KMQDTHRDKLAKMA GD+ AFRDLFSWASPKFVCSVGSREF D+QTQLFMEEV+QQ+LFPQIRSYLKLYTTIGL+KI+RFND+D EQFSAQLVSMKHKLTQ+
Sbjct:    1 LMTIATSLAPGAKIDDQMQAKMQDTHRDKLAKMATGDESAFRDLFSWASPKFVCSVGSREFCDMQTQLFMEEVRQQLLFPQIRSYLKLYTTIGLDKISRFNDMDEEQFSAQLVSMKHKLTQM 122          
BLAST of mRNA_L-elsbetiae_contig12994.2363.1 vs. uniprot
Match: A0A7S3XNM3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNM3_HETAK)

HSP 1 Score: 189 bits (479), Expect = 3.270e-53
Identity = 102/245 (41.63%), Postives = 152/245 (62.04%), Query Frame = 0
Query:   19 PAAPSQLHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNEVFAGNMLAFVTVHQHAGLAFLMLKRYKDAARILNEALVHVGRANRSGQLQRSGYQDEVPKTADKMMALMAIATSLAPGAKIDEQMQSKMQDTHRDKLAKMAAGDD-QAFRDLFSWASPKFVC-SVG--------SREFYDLQTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDVEQFSAQLVSMKHKLTQV 253
            P   S +H M GYF++VG+SRL+CLLGDY+  ++VL  ID  DK+E+F  ++   + +  H G A LML+RY+D      + L+H+ R  ++GQL  +   D+  K  +KM+AL AIA    PGA +DE ++ ++Q+ H ++   + AG D Q F DLF  A+PKF+  SV         +++    Q +LF+E+V  Q+  P+IRSYLKLY+T+ LEK+ARF  L   +  A LVS+KH+  QV
Sbjct:  247 PPGVSNVHLMLGYFSLVGLSRLECLLGDYHAALEVLGPIDTADKSELFTSSLACHLNLFYHTGFAQLMLRRYRDCLATFQDVLLHLHRLAKAGQLHSNPLGDQAGKLKEKMLALCAIAAHFCPGAPLDELVRRQIQEKHGERARALEAGGDAQPFEDLFVPAAPKFIVPSVPDYGQPVNFAQDAVKQQLRLFLEDVTSQLHLPKIRSYLKLYSTLSLEKLARFTGLGEAELEAALVSLKHRNRQV 491          
BLAST of mRNA_L-elsbetiae_contig12994.2363.1 vs. uniprot
Match: F0XXG4_AURAN (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXG4_AURAN)

HSP 1 Score: 186 bits (471), Expect = 4.960e-52
Identity = 105/239 (43.93%), Postives = 142/239 (59.41%), Query Frame = 0
Query:   21 APSQLHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNEVFAGNMLAFVTVHQHAGLAFLMLKRYKDAARILNEALVHVGRANRSGQLQRSGYQDEVPKTADKMMALMAIATSLAPGAKIDEQMQSKMQDTHRDKLAKMAAGDDQAFRDLFSWASPKFVCSV---------GSREFYDLQTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDVEQFSAQLVSMKHKL 250
            APS LH   GYFA +  SR++CLLGDY   +  L A+D  D+   FA      + V  H G + +MLKRY+DA    +  L H+ R  + G LQR    D+V K  D+M+AL AIA +LAPG  +D+ + + ++D + DK+A M  GD   F ++ ++ASPKFV             S + Y  Q +LF +EV QQ    +IRSYLKLYT+IGL+K+ARFND  V  F AQLV +K KL
Sbjct:  196 APSPLHYQMGYFATISRSRVECLLGDYEASVAALGAVDPFDEGAEFAKIFSCRLNVLYHLGYSLMMLKRYRDALATFDGVLAHLARLAKHGGLQRFPAADQVQKMNDRMLALFAIALALAPGFPVDDGVAAAIKDKYGDKMALMERGDAATFDNMLTYASPKFVVPSIPDYGAPVNSSHDAYKQQIRLFNDEVLQQQKLSKIRSYLKLYTSIGLDKLARFNDESVAAFRAQLVGIKAKL 434          
BLAST of mRNA_L-elsbetiae_contig12994.2363.1 vs. uniprot
Match: R7QLU4_CHOCR (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLU4_CHOCR)

HSP 1 Score: 175 bits (443), Expect = 9.590e-48
Identity = 93/234 (39.74%), Postives = 145/234 (61.97%), Query Frame = 0
Query:   25 LHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNEVFAGNMLAFVTVHQHAGLAFLMLKRYKDAARILNEALVHVGRANRSGQLQRSGYQDEVPKTADKMMALMAIATSLAPGAKIDEQMQSKMQDTHRDKLAKMAAGDDQAFRDLFSWASPKFVCSVG---------SREFYDLQTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDVEQFSAQLVSMKHK 249
            +++  GYFAI+G+ R+  LLGDY   + VL+ +D    + +F       V+++ + G  ++ML+RY+DAARI +  ++H+GR   +    RS   +++ K  D+MMAL+A+  +L P  ++DE M S +++   D+LA++  G+  AF DLF +ASPKF+C            + E   LQT+LFMEEVK Q+L P+IRSYLKLYT I +EK+A   D+D     + L ++KHK
Sbjct:  232 VYRYIGYFAIIGLLRVNTLLGDYRLALMVLQPLDFDVSSALFTHVTACHVSIYYYMGFCYIMLRRYEDAARIFSSTVLHIGRIKHNHT--RSYQYEQINKRNDQMMALLALCLTLQP-LQVDESMMSMVREKAGDRLARLRQGEPHAFEDLFIYASPKFICPAAPDYDVIDDTNMEAPRLQTKLFMEEVKSQLLLPEIRSYLKLYTKIEIEKLAALMDVDESTLRSHLHALKHK 462          
BLAST of mRNA_L-elsbetiae_contig12994.2363.1 vs. uniprot
Match: A0A2B4RG74_STYPI (Eukaryotic translation initiation factor 3 subunit L n=3 Tax=Scleractinia TaxID=6125 RepID=A0A2B4RG74_STYPI)

HSP 1 Score: 173 bits (438), Expect = 4.470e-47
Identity = 94/236 (39.83%), Postives = 148/236 (62.71%), Query Frame = 0
Query:   25 LHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNEVFAGNMLAFVTVHQHAGLAFLMLKRYKDAARILNEALVHVGRANRSGQLQRSGYQ-DEVPKTADKMMALMAIATSLAPGAKIDEQMQSKMQDTHRDKLAKMAAGDDQAFRDLFSWASPKFVCSVG----------SREFYDLQTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDVEQFSAQLVSMKHK 249
            L++M GYF+++G+ RL  LLGDY++ IKVLE +++ +K  +++      +T + + G A+LM+KRY+DA R  +  L+++ R       Q   YQ +++ K  D+M  L+AI  +L P  +IDE + S++++ + D+L ++  GD Q F + FS+A PKF+  V           +RE ++LQ ++FM EV QQ L P IRSYLKLYTT+ + K+A F D+D  QF  QL+  KHK
Sbjct:  239 LYKMLGYFSLIGLLRLHSLLGDYFQAIKVLENVEL-NKKSLYSRVPACQITTYYYVGFAYLMMKRYQDAIRSFSNILLYIQRTK--NMFQTKSYQYEQIMKKNDQMYVLLAICLTLCP-QRIDENVHSQLREKNADRLQRLQRGDLQTFEESFSYACPKFISPVPPNFDAPPANFNREPFNLQLKVFMNEVSQQSLIPVIRSYLKLYTTMPIAKLAAFLDMDKSQFRTQLLCFKHK 470          
BLAST of mRNA_L-elsbetiae_contig12994.2363.1 vs. uniprot
Match: A0A6J8D4W6_MYTCO (Eukaryotic translation initiation factor 3 subunit L n=3 Tax=Mytilus TaxID=6548 RepID=A0A6J8D4W6_MYTCO)

HSP 1 Score: 171 bits (433), Expect = 2.010e-46
Identity = 94/239 (39.33%), Postives = 147/239 (61.51%), Query Frame = 0
Query:   25 LHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNEVFAGNMLAFVTVHQHAGLAFLMLKRYKDAARILNEALVHVGRANRSGQLQRSGYQDEVPKTADKMMALMAIATSLAPGAKIDEQMQSKMQDTHRDKLAKMAAGDDQAFRDLFSWASPKFVCSV----------GSREFYDLQTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDVEQFSAQLVSMKHKLTQV 253
            L++M GYF+++G+ RL  LLGDYY+ +KVLE+ID   KN +++      +T   + G  ++M++RY+DA R L+  L+++ R  +  Q  R+   D++ K  DKM  L+AI   L P  +IDE + S++++   DK+ +M  GD + F   FS+A PKF+  V            +E + LQ ++F++EV+QQIL P IRSYLKLYTT+ L K+A F ++ VE+    L+  KHK+  V
Sbjct:  229 LYKMLGYFSLIGLLRLHSLLGDYYQALKVLESIDFNKKN-MYSRVPACQITTFYYVGFCYMMMRRYQDAIRTLSNVLLYIQRTKQMFQ-SRAQLYDQITKMNDKMYTLLAICLVLHP-MRIDESVHSQLREKFADKMLRMQKGDIEEFTSNFSFACPKFLSPVPPNYDTPSVVNHKEPFMLQHKVFIDEVQQQILLPTIRSYLKLYTTLPLSKLAGFMEMPVEELKTHLMCFKHKMKNV 464          
BLAST of mRNA_L-elsbetiae_contig12994.2363.1 vs. uniprot
Match: A0A2C9KUU3_BIOGL (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9KUU3_BIOGL)

HSP 1 Score: 171 bits (432), Expect = 3.750e-46
Identity = 96/239 (40.17%), Postives = 150/239 (62.76%), Query Frame = 0
Query:   23 SQLHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNEVFAGNMLAFVTVHQHAGLAFLMLKRYKDAARILNEALVHVGRANRSGQLQRSGYQDEVPKTADKMMALMAIATSLAPGAKIDEQMQSKMQDTHRDKLAKMAAGDDQAFRDLFSWASPKFVCSV-------GS----REFYDLQTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDVEQFSAQLVSMKHKL 250
            + L++M GY+++VG+ RL  LLGDYY+ +KVLE ID  +KN +++      +T + + G A++M++RY+DA R L+  L+++ R     Q +   Y D++ K  DKM  L++I   L P  +IDE + S +++ ++DK+ +M  G+ Q F   FS+A PKF+  V       GS    +E Y LQ  +F EEV+QQIL P IRSYLKLYTT+ + K+A F +++ E+   QL+  KHK+
Sbjct:  245 NSLYKMLGYYSLVGLLRLHSLLGDYYQALKVLENIDF-NKNSLYSKVPACQITKYYYVGFAYMMMRRYEDAIRTLSTILLYIQRTKTMFQNKTQLY-DQISKMNDKMYTLLSICLVLYP-MRIDESVHSHLREKYQDKMNRMQKGEKQEFETSFSFACPKFLSPVPPNYDSDGSVTMFKEPYQLQLLVFKEEVEQQILIPTIRSYLKLYTTMPISKLAAFMEMNEEELCTQLMCFKHKM 480          
BLAST of mRNA_L-elsbetiae_contig12994.2363.1 vs. uniprot
Match: A0A210QGE9_MIZYE (Eukaryotic translation initiation factor 3 subunit L n=4 Tax=Pectinidae TaxID=6566 RepID=A0A210QGE9_MIZYE)

HSP 1 Score: 171 bits (432), Expect = 5.710e-46
Identity = 90/236 (38.14%), Postives = 145/236 (61.44%), Query Frame = 0
Query:   25 LHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNEVFAGNMLAFVTVHQHAGLAFLMLKRYKDAARILNEALVHVGRANRSGQLQRSGYQDEVPKTADKMMALMAIATSLAPGAKIDEQMQSKMQDTHRDKLAKMAAGDDQAFRDLFSWASPKF----------VCSVGSREFYDLQTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDVEQFSAQLVSMKHKL 250
            L++M GYF+++G+ RL  LLGDYY+ +K LE ID   KN +++      +T   + G A+LM++RY+DA R  +  L+++ R  +  Q +   Y D++ K  DKM  L++I+  L P  +IDE + S++++   DK+ +M  GD + F+  FS+A PKF          +  +  +E + LQ ++F+EEV+QQI+ P IRSYLKLYTT+ L K+A F D+  ++    L+  KHK+
Sbjct:  240 LYKMLGYFSLIGLLRLHSLLGDYYQALKCLECIDFNKKN-MYSRVPACQITTFYYVGFAYLMMRRYQDAIRTFSNILLYIQRTKQMFQTRAQLY-DQISKMNDKMYTLLSISLVLHP-MRIDESVHSQLREKFADKMLRMQKGDQEEFQQNFSFACPKFLSPVPPNYDTIAGINHKEPFSLQLKVFLEEVRQQIVLPTIRSYLKLYTTLPLSKLAIFMDMSEDELRTHLMCFKHKM 472          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12994.2363.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZE6_ECTSI2.320e-16094.47Eukaryotic translation initiation factor 3 subunit... [more]
A0A835YSE4_9STRA9.460e-7850.79Eukaryotic translation initiation factor 3 subunit... [more]
G3G5N9_9PHAE2.090e-6887.70Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S3XNM3_HETAK3.270e-5341.63Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
F0XXG4_AURAN4.960e-5243.93Eukaryotic translation initiation factor 3 subunit... [more]
R7QLU4_CHOCR9.590e-4839.74Eukaryotic translation initiation factor 3 subunit... [more]
A0A2B4RG74_STYPI4.470e-4739.83Eukaryotic translation initiation factor 3 subunit... [more]
A0A6J8D4W6_MYTCO2.010e-4639.33Eukaryotic translation initiation factor 3 subunit... [more]
A0A2C9KUU3_BIOGL3.750e-4640.17Eukaryotic translation initiation factor 3 subunit... [more]
A0A210QGE9_MIZYE5.710e-4638.14Eukaryotic translation initiation factor 3 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019382Translation initiation factor 3 complex subunit LPFAMPF10255Paf67coord: 8..253
e-value: 1.2E-73
score: 248.4
IPR019382Translation initiation factor 3 complex subunit LPANTHERPTHR13242EUKARYOTIC TRANSLATION INITIATION FACTOR 3coord: 16..253
NoneNo IPR availablePANTHERPTHR13242:SF0EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Lcoord: 16..253
NoneNo IPR availableTMHMMTMhelixcoord: 65..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12994contigL-elsbetiae_contig12994:174..4811 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12994.2363.1mRNA_L-elsbetiae_contig12994.2363.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12994 174..4811 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12994.2363.1 ID=prot_L-elsbetiae_contig12994.2363.1|Name=mRNA_L-elsbetiae_contig12994.2363.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=253bp
MMRCAQAKKRPAANDAAVPAAPSQLHQMAGYFAIVGMSRLQCLLGDYYEC
IKVLEAIDITDKNEVFAGNMLAFVTVHQHAGLAFLMLKRYKDAARILNEA
LVHVGRANRSGQLQRSGYQDEVPKTADKMMALMAIATSLAPGAKIDEQMQ
SKMQDTHRDKLAKMAAGDDQAFRDLFSWASPKFVCSVGSREFYDLQTQLF
MEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDVEQFSAQLVSMKHKL
TQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019382eIF3l