prot_L-elsbetiae_contig1297.2350.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1297.2350.1
Unique Nameprot_L-elsbetiae_contig1297.2350.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length571
Homology
BLAST of mRNA_L-elsbetiae_contig1297.2350.1 vs. uniprot
Match: A0A6H5JF87_9PHAE (Fip1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF87_9PHAE)

HSP 1 Score: 298 bits (764), Expect = 3.260e-90
Identity = 182/259 (70.27%), Postives = 193/259 (74.52%), Query Frame = 0
Query:  232 DGFRVVVGRE-VAPAVTPVVPTKRFLRGTNTLVNTTXXXXXXXXXXXXXXXXXKPVSAAAGIASLVPSKGAPVATARPSLKPGEYPPTAELQQSTGKSAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRTRGRSKMTTNIKGGRGGGSAGGSGNHTRHGGGDRPNSLRPPQQS--QMHTHNGPPGPNNFRPLGPAGKNGAWGXXXXXXXXXXVGPERFPHGFGSGPP--GRGNASPPWFEGQ 485
            DGFRVVVGRE VAPA  PVVPTKRFLRGTNTLVN+T                 KPVSAAAGIASLVPSKGAPVATA+PSLKPGEYPPTAELQQSTGK+AFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRT GRS+   +           GS    RHG     NSL+P Q+   Q+H +N PPGPNNFRP G  G N  WG XXXXXXXXX GPE FP GFGS PP  G+ NASP W +GQ
Sbjct:  247 DGFRVVVGREGVAPAAAPVVPTKRFLRGTNTLVNSTTTSGTTATS--------KPVSAAAGIASLVPSKGAPVATAKPSLKPGEYPPTAELQQSTGKTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRTVGRSRSGKSAGXXXXXXXXSGSSGPPRHG--RVVNSLQPQQRPPIQVHHNNNPPGPNNFRPQGLTGGNVLWGGXXXXXXXXXPGPEGFPQGFGSRPPAGGQSNASPLWLDGQ 495          
BLAST of mRNA_L-elsbetiae_contig1297.2350.1 vs. uniprot
Match: D8LU95_ECTSI (Fip1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU95_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 4.970e-71
Identity = 137/176 (77.84%), Postives = 142/176 (80.68%), Query Frame = 0
Query:  233 GFRVVVGRE-VAPAVTPVVPTKRFLRGTNTLVNTTXXXXXXXXXXXXXXXXXKPVSAAAGIASLVPSKGAPVATARPSLKPGEYPPTAELQQSTGKSAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRTRGRSKMTTNIKGGRGGGSAG-GSGNHTRHG 406
            GFRVVVGRE VAPA  PVVPTKRFLRGTNTLVN T                 KPVSAAAGIASLVPSKGAPVATA+PSLKPGEYPPTAELQQSTGK+AFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRT GRS+   +  GGR GG+ G GS    RHG
Sbjct:  249 GFRVVVGREAVAPAAAPVVPTKRFLRGTNTLVNATTTGGTTASS--------KPVSAAAGIASLVPSKGAPVATAKPSLKPGEYPPTAELQQSTGKTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRTVGRSRNAKSA-GGRVGGNVGSGSSGPPRHG 415          
BLAST of mRNA_L-elsbetiae_contig1297.2350.1 vs. uniprot
Match: A0A835YKB3_9STRA (Fip1 motif-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKB3_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 9.040e-16
Identity = 38/63 (60.32%), Postives = 47/63 (74.60%), Query Frame = 0
Query:  314 EYPPTAELQQSTGKSAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDR 376
            +YPP  ELQ   G+SAF V +D +E+ PWR PGVD++DFFNYGFTE +WR Y   QLR RYD+
Sbjct:  206 DYPPLEELQLRYGRSAFGVRMDELEDTPWRRPGVDLSDFFNYGFTEGTWRAYLLAQLRLRYDK 268          
BLAST of mRNA_L-elsbetiae_contig1297.2350.1 vs. uniprot
Match: A0A7S4DHM3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHM3_HETAK)

HSP 1 Score: 85.1 bits (209), Expect = 8.690e-15
Identity = 37/64 (57.81%), Postives = 47/64 (73.44%), Query Frame = 0
Query:  314 EYPPTAELQQSTGK--SAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYD 375
            E+PP     Q  GK  SAFD++IDG+++ PWR PGVDI+D+FNYG TE +WR YC KQL  RY+
Sbjct:  142 EFPPLPTELQHPGKRNSAFDIEIDGLDDHPWRRPGVDISDYFNYGLTEKTWREYCIKQLTLRYE 205          
BLAST of mRNA_L-elsbetiae_contig1297.2350.1 vs. uniprot
Match: A0A1V9YWA6_9STRA (Pre-mRNA polyadenylation factor n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YWA6_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 8.960e-14
Identity = 39/71 (54.93%), Postives = 49/71 (69.01%), Query Frame = 0
Query:  307 RPSLKPGEYPPTAELQQSTG----KSAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNR 373
            +P +   +Y PT E     G    ++AFDVDID +EE+PWR PGVDI+D+FNYGF E SWR YC KQL+ R
Sbjct:  115 QPRIPSDQYEPTFEELSLLGIGGRRTAFDVDIDQLEEKPWRKPGVDISDYFNYGFDETSWRDYCAKQLQKR 185          
BLAST of mRNA_L-elsbetiae_contig1297.2350.1 vs. uniprot
Match: A0A1W0A514_9STRA (Pre-mRNA polyadenylation factor n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A514_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.040e-13
Identity = 38/64 (59.38%), Postives = 46/64 (71.88%), Query Frame = 0
Query:  314 EYPPTAELQQSTG----KSAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNR 373
            +Y PT E     G    ++AFDVDID +EE+PWR PGVDI+D+FNYGF E SWR YC KQL+ R
Sbjct:  112 QYEPTFEELSLLGIGGRRTAFDVDIDQLEEKPWRKPGVDISDYFNYGFDESSWRDYCTKQLQKR 175          
BLAST of mRNA_L-elsbetiae_contig1297.2350.1 vs. uniprot
Match: A0A067C040_SAPPC (Fip1 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C040_SAPPC)

HSP 1 Score: 82.0 bits (201), Expect = 2.190e-13
Identity = 40/67 (59.70%), Postives = 48/67 (71.64%), Query Frame = 0
Query:  312 PGE-YPPTAELQQSTG----KSAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNR 373
            PG+ Y PT E     G    ++AFDVDID +EE+PWR PGVDI+D+FNYGF E SWR YC KQL+ R
Sbjct:  120 PGDQYEPTFEELSLLGIGGRRTAFDVDIDQLEEKPWRKPGVDISDYFNYGFDEASWRDYCAKQLQKR 186          
BLAST of mRNA_L-elsbetiae_contig1297.2350.1 vs. uniprot
Match: T0QKY1_SAPDV (Fip1 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QKY1_SAPDV)

HSP 1 Score: 82.0 bits (201), Expect = 3.560e-13
Identity = 40/67 (59.70%), Postives = 48/67 (71.64%), Query Frame = 0
Query:  312 PGE-YPPTAELQQSTG----KSAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNR 373
            PG+ Y PT E     G    ++AFDVDID +EE+PWR PGVDI+D+FNYGF E SWR YC KQL+ R
Sbjct:  123 PGDQYEPTFEELSLLGIGGRRTAFDVDIDQLEEKPWRKPGVDISDYFNYGFDEASWRDYCAKQLQKR 189          
BLAST of mRNA_L-elsbetiae_contig1297.2350.1 vs. uniprot
Match: A0A137P6A2_CONC2 (Fip1-domain-containing protein n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137P6A2_CONC2)

HSP 1 Score: 79.0 bits (193), Expect = 5.060e-13
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 0
Query:  323 QSTGKSAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYD 375
            Q  G+S  D+D+DG+EEQPWR PG DI D+FNYGF E +WR YC KQ   R D
Sbjct:  141 QFNGESLLDLDLDGLEEQPWRKPGADITDYFNYGFNEVTWRAYCNKQKSMRED 193          
BLAST of mRNA_L-elsbetiae_contig1297.2350.1 vs. uniprot
Match: A0A4Q9M046_9MICR (Pre-mRNA polyadenylation factor Fip1 n=2 Tax=Hamiltosporidium TaxID=1176354 RepID=A0A4Q9M046_9MICR)

HSP 1 Score: 76.6 bits (187), Expect = 1.820e-12
Identity = 34/77 (44.16%), Postives = 48/77 (62.34%), Query Frame = 0
Query:  311 KPGEYPPTAELQQSTGKSAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRTRGRSKMTTNI 387
            K  E     E Q  TG+  F+ ++D +EE+PW+ PG DI D+FNYGF E +WR+YCEKQ   R + T  R+  T ++
Sbjct:   33 KKDELKVALESQNYTGQGVFEFELDTLEEKPWKKPGEDITDYFNYGFDETTWRMYCEKQKGLRTEYTPSRTFETKSV 109          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1297.2350.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JF87_9PHAE3.260e-9070.27Fip1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LU95_ECTSI4.970e-7177.84Fip1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YKB3_9STRA9.040e-1660.32Fip1 motif-domain-containing protein n=1 Tax=Tribo... [more]
A0A7S4DHM3_HETAK8.690e-1557.81Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1V9YWA6_9STRA8.960e-1454.93Pre-mRNA polyadenylation factor n=1 Tax=Achlya hyp... [more]
A0A1W0A514_9STRA2.040e-1359.38Pre-mRNA polyadenylation factor n=1 Tax=Thraustoth... [more]
A0A067C040_SAPPC2.190e-1359.70Fip1 domain-containing protein n=1 Tax=Saprolegnia... [more]
T0QKY1_SAPDV3.560e-1359.70Fip1 domain-containing protein n=1 Tax=Saprolegnia... [more]
A0A137P6A2_CONC25.060e-1360.38Fip1-domain-containing protein n=1 Tax=Conidiobolu... [more]
A0A4Q9M046_9MICR1.820e-1244.16Pre-mRNA polyadenylation factor Fip1 n=2 Tax=Hamil... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 160..188
NoneNo IPR availableCOILSCoilCoilcoord: 491..514
NoneNo IPR availablePANTHERPTHR13484FIP1-LIKE 1 PROTEINcoord: 198..516
IPR007854Pre-mRNA polyadenylation factor Fip1 domainPFAMPF05182Fip1coord: 331..372
e-value: 2.1E-21
score: 75.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1297contigL-elsbetiae_contig1297:18998..23678 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1297.2350.1mRNA_L-elsbetiae_contig1297.2350.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1297 18939..23678 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1297.2350.1 ID=prot_L-elsbetiae_contig1297.2350.1|Name=mRNA_L-elsbetiae_contig1297.2350.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=571bp
MVSAKGQVDSSEASSPGEKAAAPAESITPAELPASNDETVSPPPEVTETA
ATERQDADQLDGAPVSAGATRNSQLKLPVTTTGAGGAGEFRVPQMEEEAS
QEKTEASADGEGKTAGRPAGANTEDGDSGGGGGGGEGGGGGGGGEHESLP
AEKAATNATLDDADISIEQQQQQQQQQQQQQQQQQQQQPSSAAKERQHDG
TAQEPGGDAMEVAGELTVVGQVDSSDEEDDDDGFRVVVGREVAPAVTPVV
PTKRFLRGTNTLVNTTSSSTTGAKQSGGGTTSSKPVSAAAGIASLVPSKG
APVATARPSLKPGEYPPTAELQQSTGKSAFDVDIDGMEEQPWRHPGVDIA
DFFNYGFTEDSWRVYCEKQLRNRYDRTRGRSKMTTNIKGGRGGGSAGGSG
NHTRHGGGDRPNSLRPPQQSQMHTHNGPPGPNNFRPLGPAGKNGAWGGGG
GGGGGGGVGPERFPHGFGSGPPGRGNASPPWFEGQPPPPQQQQQQQQQQQ
MQQQQQQQQQQQQMHPQNRQHFAAGGGPGGGAIGTGGNMNNGMVDPAGMR
RSGSPDPRAGPLENKMPRLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007854Fip1_dom