prot_L-elsbetiae_contig12962.2348.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12962.2348.1
Unique Nameprot_L-elsbetiae_contig12962.2348.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length367
Homology
BLAST of mRNA_L-elsbetiae_contig12962.2348.1 vs. uniprot
Match: D7FHD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD6_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 2.970e-52
Identity = 118/240 (49.17%), Postives = 161/240 (67.08%), Query Frame = 0
Query:  136 TTTSPAEVEIVPDAAVGANWLAEGISSVARNGLNHAIMAGETGSYRVQARDQH------GGDDVTSHLVPISPASSDED-RYEGYIGTVHDNADGTYEFSYVPEIAGAYSVQTRVRGERLKQSDKFNISQTSAALFPTGFLEDPTLTVVHGKLDAARCSLMLKPG---PNESPEGANANFSIVSKDSFGNTRTGTARTGFDGYGDGTSDVFVVTLYNDHGDFLRTTSAVQTVTIDGNSTE 365
            T+ SP ++E+V D +VGA+ +AEGI+  + NG+  A+ AG + S+RVQARD++      GGD++T+ LVP+ PA+ +E  R+EGY+GTV DN DGTY+ SY  E+ G Y++Q R+ GER+   +  ++  T AA +P    EDP LTVVHG+LD  +C++M  P    P     G   NFSIVSKDS GNTRTG +      +GD  SDVFVVTL +DHG  +RTTSAVQT+T   N+TE
Sbjct:  220 TSCSPFQMEVVADRSVGAHSVAEGIAPFSLNGVFQAV-AGSSQSFRVQARDKNHFDRREGGDNLTTFLVPVEPAAWEESQRHEGYVGTVIDNEDGTYDVSYNAELHGTYTLQARIGGERVSHCNA-SVVPTGAAAYPACVFEDPVLTVVHGELDGTKCTVMGFPDKTRPTVHSAGTAKNFSIVSKDSVGNTRTGPS---LGEHGDDRSDVFVVTLSDDHGHVVRTTSAVQTITA-ANATE 453          
BLAST of mRNA_L-elsbetiae_contig12962.2348.1 vs. uniprot
Match: A0A6H5LGQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGQ6_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 2.500e-49
Identity = 115/240 (47.92%), Postives = 156/240 (65.00%), Query Frame = 0
Query:  136 TTTSPAEVEIVPDAAVGANWLAEGISSVARNGLNHAIMAGETGSYRVQARDQH------GGDDVTSHLVPISPASSDED-RYEGYIGTVHDNADGTYEFSYVPEIAGAYSVQTRVRGERLKQSDKFNISQTSAALFPTGFLEDPTLTVVHGKLDAARCSLMLKPG---PNESPEGANANFSIVSKDSFGNTRTGTARTGFDGYGDGTSDVFVVTLYNDHGDFLRTTSAVQTVTIDGNSTE 365
            T+ SP ++E+V D +VGA+ +AEGI+  + NG+  A+ AG + ++RVQARD++      GGD VT+ +VP+ PA  +E+ R+EGY GTV DN DGTY+ SY  E+AG Y++Q R+ GER+    K ++  T AA +P    EDP LTVVHG+LD A+C+++  P    P     G   NFSIVSKDSFGNTR               SDVFV+TL +DHG  +RTTSAVQT+T   N+TE
Sbjct:  129 TSCSPFQMEVVSDRSVGAHSVAEGIAPFSLNGVFQAV-AGSSQTFRVQARDKNHFDRLQGGDSVTTFVVPVEPARWEENQRHEGYAGTVVDNEDGTYDVSYNAELAGTYTLQARIGGERVSHC-KASVVPTGAAAYPACAFEDPVLTVVHGELDGAKCTVLGFPDKTRPTVHSAGIAKNFSIVSKDSFGNTR---------------SDVFVLTLSDDHGHVVRTTSAVQTITA-ANATE 350          
BLAST of mRNA_L-elsbetiae_contig12962.2348.1 vs. uniprot
Match: A0A6H5JXK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK7_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 3.590e-28
Identity = 95/250 (38.00%), Postives = 131/250 (52.40%), Query Frame = 0
Query:  139 SPAEVEIVPDAAVGANWLAEGISSVARNGLNHAIMAGETGSYRVQARDQ------HGGDDVTSHLVPISPASSDEDRYEGYIGTVHDNADGTYEFSYVPEIAGAYSVQTRVRGERLKQSDKFNISQTSAALF-----------PTGF-LEDPTLTVVHGKLDAARCSL-----MLKPGPNESPEGANANFSIVSKDSFGNTRTGTARTGFDGYGDGTSDVFVVTLYNDHGDFLRTTSAVQTVTIDGNSTE 365
            SP EV + P     +   AEG +S A + L   + AG TG + +QA+D        GGD+V+ H V     +S       Y GTV DNADGTY   Y    AG YS++  + GE ++       S T++ L            P+G  L+ PTLTVVHG L    C+      +   G +++  G  ANF +VS+D+FGN RTG + T F GYGDG+SDVF+ TL   +G  + T+SAVQ VT+   + E
Sbjct: 2831 SPFEVVVSPGPTTASTCEAEGDASPAMDSLVEGV-AGMTGYFNIQAKDTFGNNRLEGGDEVSVHAVLSESTTS-------YRGTVVDNADGTYLAVYTVPRAGTYSMRVTIGGEAVQHCTAPVNSSTNSVLSREYDGISVYSPPSGCSLDYPTLTVVHGDLHTPSCTAEEVANIGDEGLSKAVVGVPANFQVVSRDAFGNIRTGDSTTHFGGYGDGSSDVFMATLSGANGYRVTTSSAVQIVTVTNGTAE 3072          
BLAST of mRNA_L-elsbetiae_contig12962.2348.1 vs. uniprot
Match: D7FNA6_ECTSI (Similar to titin isoform N2-B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA6_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 1.830e-26
Identity = 93/250 (37.20%), Postives = 127/250 (50.80%), Query Frame = 0
Query:  139 SPAEVEIVPDAAVGANWLAEGISSVARNGLNHAIMAGETGSYRVQARDQ------HGGDDVTSHLVPISPASSDEDRYEGYIGTVHDNADGTYEFSYVPEIAGAYSVQTRVRGERLKQSDKFNISQTSAALF-----------PTGFLED-PTLTVVHGKLDAARCSLML-----KPGPNESPEGANANFSIVSKDSFGNTRTGTARTGFDGYGDGTSDVFVVTLYNDHGDFLRTTSAVQTVTIDGNSTE 365
            SP EV + P     +   AEG +S A + L   + AG TG + +QA+D        GGD+V+ H       +S       Y GTV DNADGTY   Y    AG YS++  + GE ++       S T++ L            P+G   D PTLTVVHG L    C+          G +++  G  ANF +VS+D+FGN RTG + T F GYGDG+SDVF+  L   +G  + T+SAVQ VT+   + E
Sbjct: 2972 SPFEVVVSPGPTTASTCEAEGDASPAMDSLAEGV-AGMTGYFNIQAKDTFGNNRLEGGDEVSVHAALSESTTS-------YRGTVVDNADGTYLAVYTVPRAGTYSMRVTIGGEAVQHCTPPVNSTTTSVLSREYDGISVYSPPSGCSPDYPTLTVVHGDLHTPSCTAEEVANSGDEGLSKAVVGVPANFQVVSRDAFGNIRTGDSTTHFGGYGDGSSDVFMAILSGANGYRVTTSSAVQIVTVANGTAE 3213          
BLAST of mRNA_L-elsbetiae_contig12962.2348.1 vs. uniprot
Match: K0SEM3_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SEM3_THAOC)

HSP 1 Score: 74.7 bits (182), Expect = 9.770e-11
Identity = 60/194 (30.93%), Postives = 94/194 (48.45%), Query Frame = 0
Query:  187 QHGGDDVTSHLVPISPASSDEDRYEGYIGTVHDNADGTYEFSYVPEIAGAYSVQTRVRGERL---------KQSDKFNISQTSAALFPT--GFLEDPTLTVVHGKLDAARCSLML----KPGPNESPEGANANFSIVSKDSFGNTRTGTARTGFDGYGDGTSDVFVVTLYNDHGDFLRTTSAVQTVTIDGNSTE 365
            Q GGDDV    V     ++ +  Y G+   V D  DG+Y  SY   +AG+Y V   V GER+         K+ D       +  + P+     ++ +LTV+H +L  A  SL+       G + +  G    F I ++D FGN R+G+  T  +  GDG+ DVF V+L   +   + T++AVQ +T   +S +
Sbjct:  909 QTGGDDVR---VSFRSTANPDVVYRGH---VLDQNDGSYRLSYSIPLAGSYDVSITVAGERVQYCVGPTGDKRWDNRQFDGNNVYVSPSFCSLNDELSLTVIHRELHGASSSLVGDGSDSNGLSSAVVGVETGFVIEARDQFGNLRSGSGTTNIEMSGDGSDDVFFVSLVGPNNSVVETSTAVQILTSTDSSVQ 1096          
BLAST of mRNA_L-elsbetiae_contig12962.2348.1 vs. uniprot
Match: A0A482UEA4_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UEA4_9ARCH)

HSP 1 Score: 62.0 bits (149), Expect = 1.090e-6
Identity = 74/252 (29.37%), Postives = 106/252 (42.06%), Query Frame = 0
Query:  134 ASTTTSPAEVEIVPDAAVGA-NWLAE-GISSVARNGLNHAIMAGETGSYRVQARDQHG------GDDVTSHLVPISPASSDEDRYEGYIGTVHDNADGTYEFSYVPEIAGAYSVQTRVRGERLKQSDKFNISQTSAALFPTGFLEDPTLTVVHGKLDAARCSLMLKPGPNESPEGANANFSIVSKDSFGNTRTGTARTGFDGYGDGTSDVFVVTLYNDHGDFLRTTSAVQ------------TVTIDGNSTE 365
            A+   SP  +  +P   V + +++ E G   +A  GL   ++ G    + +QA D HG      GDD    L     A+SD          V D  DGTY  +Y     GAY +  ++ GE               A+   G    P    VH  L A  C+     G  E+  GA A+F+IVS+D+FGN RTG           G  DVF V L    G  + T+S+++            T+T+DG +TE
Sbjct:  444 AAAACSPFHMTTLPGPTVASRSYVTEQGAGLIAFTGLRGGVV-GTNQQFLIQAVDAHGNARVSGGDDFLVGLYHT--ATSD-----AVSAHVLDRQDGTYLVTYTVMQDGAYRLDVQLHGE---------------AVLEVGQSVTPFPHFVHADLHAPSCTAT-GTGLREAEAGAEASFTIVSRDAFGNVRTGANTAS----ASGVDDVFDVILAGPRG-VVYTSSSIKLALYVGASAGRFTLTLDGEATE 666          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12962.2348.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FHD6_ECTSI2.970e-5249.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LGQ6_9PHAE2.500e-4947.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXK7_9PHAE3.590e-2838.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNA6_ECTSI1.830e-2637.20Similar to titin isoform N2-B n=1 Tax=Ectocarpus s... [more]
K0SEM3_THAOC9.770e-1130.93Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A482UEA4_9ARCH1.090e-629.37Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 160..253
e-value: 2.2E-11
score: 46.3
IPR017868Filamin/ABP280 repeat-likePFAMPF00630Filamincoord: 162..251
e-value: 1.0E-6
score: 29.5
IPR017868Filamin/ABP280 repeat-likePROSITEPS50194FILAMIN_REPEATcoord: 167..251
score: 10.862
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 160..249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12962contigL-elsbetiae_contig12962:1382..5002 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12962.2348.1mRNA_L-elsbetiae_contig12962.2348.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12962 1264..5002 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12962.2348.1 ID=prot_L-elsbetiae_contig12962.2348.1|Name=mRNA_L-elsbetiae_contig12962.2348.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=367bp
MRGRLLDTFRLVDNTPPCTECPLQFSPYSLAHQTVSISTNKPPSVLQMTP
MIASGTHVLLSEEVPTDEHNLGARGSGLGTRAVPEILEKHNLVSMRHLRS
VSSLPASRISQSLPASRVFKSSLSSRINRKRIRASTTTSPAEVEIVPDAA
VGANWLAEGISSVARNGLNHAIMAGETGSYRVQARDQHGGDDVTSHLVPI
SPASSDEDRYEGYIGTVHDNADGTYEFSYVPEIAGAYSVQTRVRGERLKQ
SDKFNISQTSAALFPTGFLEDPTLTVVHGKLDAARCSLMLKPGPNESPEG
ANANFSIVSKDSFGNTRTGTARTGFDGYGDGTSDVFVVTLYNDHGDFLRT
TSAVQTVTIDGNSTEK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR017868Filamin/ABP280_repeat-like
IPR014756Ig_E-set