prot_L-elsbetiae_contig1295.2336.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1295.2336.1
Unique Nameprot_L-elsbetiae_contig1295.2336.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length278
Homology
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BLAST of mRNA_L-elsbetiae_contig1295.2336.1 vs. uniprot
Match: D8LHU4_ECTSI (Rap2 interacting protein x isoform 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU4_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 1.510e-26
Identity = 89/173 (51.45%), Postives = 102/173 (58.96%), Query Frame = 0 
Query:    1 MRAEHTLREKRLSRKVKRLGQLQKMLVASVFLERPAHLAIVISIWRSCKLNGRLEKVEQEMLQGAAEGGEEVLGFANNLSPHATAQQHQSSRGGVGSAEKLKSASLLGEGAAAQSVGVSGGNTPAP-DEDRDVRELESMLMGLEAEEELDNNVPLVRLNADGEEADPSSAASA 172
            MRAE   RE+RLSRKV+RL QL KML ASV+L+RPAHLAIVISIWR      RLE+VE EML  AAE GE+ +G                  GG  +     + +  G+G    S        PA  DEDRDVRELESMLMGLEAEEE   N+P   L ADGE     +AASA
Sbjct:  796 MRAEQKRREERLSRKVERLEQLHKMLEASVYLKRPAHLAIVISIWR------RLERVEHEMLLEAAERGEDAVGLV-------PLPARDDEDGGGRNTRHAAAPAAAGDGGTRHS-----NKAPAAVDEDRDVRELESMLMGLEAEEEDYENIPFAELTADGEAVLAEAAASA 950
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BLAST of mRNA_L-elsbetiae_contig1295.2336.1 vs. uniprot
Match: A0A6H5KE74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE74_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 1.220e-23
Identity = 81/162 (50.00%), Postives = 96/162 (59.26%), Query Frame = 0 
Query:    1 MRAEHTLREKRLSRKVKRLGQLQKMLVASVFLERPAHLAIVISIWRSCKLNGRLEKVEQEMLQGAAEGGEEVLGFANNLSPHATAQQHQSSRGGVGSAEKLKSASLLGEGAAAQSVGVSGGNTPAPDEDRDVRELESMLMGLEAEEELDNNVPLVRLNADGE 162
            +RA+   RE+RLSRKV+RL QL KML ASV+L+RPAHLAIVISIWR      RLE VE EML  AAE GE+ +G                  GG  S     + +  G+G    S  V      A DEDRDVRELE+MLMGLEA+EE  ++VP     ADGE
Sbjct:  817 IRADQKRREERLSRKVERLEQLHKMLEASVYLKRPAHLAIVISIWR------RLEGVEHEMLVEAAERGEDAVGLV-------PLPARDDKDGGGRSTRHDAAPAAAGDGGTRHSNKVPA----AVDEDRDVRELETMLMGLEADEEDYDSVPFAEFTADGE 961
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1295.2336.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHU4_ECTSI1.510e-2651.45Rap2 interacting protein x isoform 3 n=1 Tax=Ectoc... [more]
A0A6H5KE74_9PHAE1.220e-2350.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..277
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1295contigL-elsbetiae_contig1295:19642..21399 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1295.2336.1mRNA_L-elsbetiae_contig1295.2336.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1295 12505..21687 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1295.2336.1 ID=prot_L-elsbetiae_contig1295.2336.1|Name=mRNA_L-elsbetiae_contig1295.2336.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=278bp
MRAEHTLREKRLSRKVKRLGQLQKMLVASVFLERPAHLAIVISIWRSCKL
NGRLEKVEQEMLQGAAEGGEEVLGFANNLSPHATAQQHQSSRGGVGSAEK
LKSASLLGEGAAAQSVGVSGGNTPAPDEDRDVRELESMLMGLEAEEELDN
NVPLVRLNADGEEADPSSAASAVNSAASPTARGREGEGGVLASSEAGRNP
AGVGGGHSPVAFTIEDDGNDGVIAAPSVNSRGQPFFVPRCFRRRCCCCRC
RPGEHTRAPRLHRRHPYPRRRYRRSRL*
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