prot_L-elsbetiae_contig1282.2266.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1282.2266.1
Unique Nameprot_L-elsbetiae_contig1282.2266.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length345
Homology
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BLAST of mRNA_L-elsbetiae_contig1282.2266.1 vs. uniprot
Match: A0A6H5JUH3_9PHAE (Conserved oligomeric Golgi complex subunit 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUH3_9PHAE)

HSP 1 Score: 298 bits (762), Expect = 1.800e-90
Identity = 196/281 (69.75%), Postives = 210/281 (74.73%), Query Frame = 0 
Query:    3 VQEEGEALPKGEHINSPT----EASFETRFEQFYLQLSEGKTGGMVACIDEMQRIVESTRQLQQQXXXXXXXXXXXXXXXXXXXXXXXXXEVYDEMLQDCRRKAGEATLDRLRKLCQRPSRPNADRDVNGDXXXXXXXXXXXXXXLMMSEEETVIVSYHAALLGKAEGAANIYGGFLRNRLKQANDAAVKNLSSLRALYRLSLASGGGXXXXXXXXXXXTDRGXXXXXAAAASDPHPHITALATVLGEGSKLMVRLAESSLGDGVMEPVAELLHKDSKAQA 279
            V +E  A P G H    +    EA+FE RFEQFYLQL+EGKTGGMVAC+DEMQRIV+STRQ +QQ               XXXXXX     VYDEMLQDCRRKAGE TLDRLRKLCQ+ SRP+A+R  +G                 + EEETV+VSYHAALLGKAEGAANIYGGFLRNRLKQANDAAVK LSSLR LYRLSLASG  XXXXXXXXXXX    XXXXX    +DPHPHITALATVLGEGSKLMVRLAESSLGDGVMEPVAELLHKDSK QA
Sbjct:   19 VLQENPAAP-GAHAQDGSGGLLEATFEERFEQFYLQLAEGKTGGMVACVDEMQRIVDSTRQREQQLDPVKPPSAAAPPQGXXXXXXSPSAAVYDEMLQDCRRKAGEVTLDRLRKLCQKLSRPDANRHDDGGRMGGDGGTA-------LGEEETVVVSYHAALLGKAEGAANIYGGFLRNRLKQANDAAVKKLSSLRPLYRLSLASGXXXXXXXXXXXXXXXXXXXXXXXXXXADPHPHITALATVLGEGSKLMVRLAESSLGDGVMEPVAELLHKDSKTQA 291
[Close]
BLAST of mRNA_L-elsbetiae_contig1282.2266.1 vs. uniprot
Match: A0A836CHF9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHF9_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 4.150e-9
Identity = 69/181 (38.12%), Postives = 90/181 (49.72%), Query Frame = 0 
Query:   90 VYDEMLQDCRRKA----------GEATLDRLRKLCQRPSRPNADRDVNGDXXXXXXXXXXXXXXLMMSEEETVIVSYHAAL-LGKAEGAANIYGGFLRNRLKQANDAAVKNLSSLRALYRLSLASGGGXXXXXXXXXXXTDRGXXXXXAAAASDPHPHITALATVLGEGSKLMVRLAESSL 259
            VY EML  CR K           GEA ++ LR+ C+      A R+        XXXXXXXXXX     +E +  + H A+ LG+ + AANI+GG+LR+R K   D A+K LS+ RALYRLS                   R       A A D HPH+TA+A VLG  +  + RL  + L
Sbjct:   10 VYAEMLDACRAKVPPPTAELTTGGEAAVEALRQQCK------AAREA----MVQXXXXXXXXXXXXXXXDEMLDATCHLAVCLGREKQAANIFGGYLRSRAKGVADRALKRLSAQRALYRLSQV-----------------RCIQACTEADAEDAHPHVTAVAAVLGTAAAQLARLRGAGL 163
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1282.2266.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JUH3_9PHAE1.800e-9069.75Conserved oligomeric Golgi complex subunit 4 n=1 T... [more]
A0A836CHF9_9STRA4.150e-938.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 176..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1282contigL-elsbetiae_contig1282:2348..18104 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1282.2266.1mRNA_L-elsbetiae_contig1282.2266.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1282 708..18158 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1282.2266.1 ID=prot_L-elsbetiae_contig1282.2266.1|Name=mRNA_L-elsbetiae_contig1282.2266.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=345bp
MAVQEEGEALPKGEHINSPTEASFETRFEQFYLQLSEGKTGGMVACIDEM
QRIVESTRQLQQQRQGATATATAAAAAATAAPSPSAEAEVYDEMLQDCRR
KAGEATLDRLRKLCQRPSRPNADRDVNGDGGGGGSGMGGEGEGLMMSEEE
TVIVSYHAALLGKAEGAANIYGGFLRNRLKQANDAAVKNLSSLRALYRLS
LASGGGGAGMLGGGGDATDRGEGGTAAAAASDPHPHITALATVLGEGSKL
MVRLAESSLGDGVMEPVAELLHKDSKAQASGGFWSGSSTTLTCPSGRRRF
RGGGAPPDGEGYPLLLLRRRWVPRPRSAATAAAGRRGRGGSEEE*
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