prot_L-elsbetiae_contig1280.2252.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1280.2252.1
Unique Nameprot_L-elsbetiae_contig1280.2252.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length865
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1280.2252.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 162..181
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 182..864
NoneNo IPR availableSUPERFAMILY63825YWTD domaincoord: 290..446
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 29..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1280contigL-elsbetiae_contig1280:13718..16312 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1280.2252.1mRNA_L-elsbetiae_contig1280.2252.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1280 13616..18288 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1280.2252.1 ID=prot_L-elsbetiae_contig1280.2252.1|Name=mRNA_L-elsbetiae_contig1280.2252.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=865bp
MDILEMADQYHNFENFYSDTGGSNTLVNDGSHIPLGEEPYLLMPTLTYGT
HWTFQAIVKSTSLDKQCLCSIADGTGQRYFDVHIEGGNTIILFYEGIETS
LVYNTASTPIDDFVHFGIQVGSKALKVVANGATKVYNASLALTPRSSTHP
LRIMRPAHVDDNYFNGAILSIMVITISHIYYSDTYTPVTTPYVSSDGKTV
AAGIGPFDLIVTPRQSTVTTGPAAKWHSFSGYSDTLLLGTITDTWAGDST
KKIGTLEFGQTKVGFSQITGPYKNLAARGAHYFPQINAYVAVNADIGQVL
SIDIDSRQGTAVSTGGGTYSFGRGDFKNKYFFGAKISSGGKNQIFRMDPD
GTNEIAVDSETFLGTDDALYGFCLNEDDSRVFFHDKGTSQLRSIDYDLVS
NFETHFKGSEFGSLDYCQGYIYYMGPDGENAAQIYRYNPVTDEKEAIYGV
YETLRAHRYGHSHLFIHRASNSMFLSGTKFQHVTPTSFDFTTPYMFEKSS
RVGSFTFRWEPIENAVSYNVIQNGVVIGNTTSTEFEATGLGVRNAKYSFT
LDYSTSSDPTTFVQARYHYIDYIAKLVVSNSTPFMPDNWKKYSNFLGAVD
PYHPSNIFFGISSNPASLQKYNIETNAYTKVADWFPNIRTGSVYARSWIT
RRVFVVINSRPTVVYDAGVDCERMALFATGEQFMDDPDSLVFTAPANISC
IASTFHEDRLIYGTNNSDISVSVNGSGDTFICSTGNSASGFVAIDPWDSS
TLVYSNSGKLAHRNLQTGVESISLTTDHRGTLEARVLNGIVYFVGRHSSY
GVIRERIDGTDHFTSGPLVRADGKSVPNYTTGFCESDCHRLREQVVNRHR
HDRRWDAVGFPDRP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013320ConA-like_dom_sf