prot_L-elsbetiae_contig12670.2149.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12670.2149.1
Unique Nameprot_L-elsbetiae_contig12670.2149.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length57
Homology
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BLAST of mRNA_L-elsbetiae_contig12670.2149.1 vs. uniprot
Match: D7FUI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI8_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 2.490e-13
Identity = 35/53 (66.04%), Postives = 40/53 (75.47%), Query Frame = 0 
Query:    1 MTFSGSSDVFFTDGVFETVPGGTCVIQIDDPSTVTIDANEDELTLADTCYVKV 53
            MT + S+ V FT+G +  VP GTC IQ DDPSTVTIDA+EDEL L  TCYVKV
Sbjct:  443 MTITDSTTVSFTNGGYSNVPSGTCTIQADDPSTVTIDADEDELVLEGTCYVKV 495
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BLAST of mRNA_L-elsbetiae_contig12670.2149.1 vs. uniprot
Match: A0A6H5KFA6_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 2.520e-13
Identity = 35/53 (66.04%), Postives = 40/53 (75.47%), Query Frame = 0 
Query:    1 MTFSGSSDVFFTDGVFETVPGGTCVIQIDDPSTVTIDANEDELTLADTCYVKV 53
            MT + S+ V FT+G +  VP GTC IQ DDPSTVTIDA+EDEL L  TCYVKV
Sbjct: 1110 MTITDSTTVSFTNGGYSNVPSGTCTIQTDDPSTVTIDADEDELVLEGTCYVKV 1162
[Close]
BLAST of mRNA_L-elsbetiae_contig12670.2149.1 vs. uniprot
Match: D7FZZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ4_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 2.430e-10
Identity = 33/53 (62.26%), Postives = 38/53 (71.70%), Query Frame = 0 
Query:    1 MTFSGSSDVFFTDGVFETVPGGTCVIQIDDPSTVTIDANEDELTLADTCYVKV 53
            MT S S+ V FT+    +V  GTC+IQ DDPSTVTID +EDEL L  TCYVKV
Sbjct:  907 MTISDSTAVSFTNDGSYSVASGTCIIQTDDPSTVTIDPDEDELILEGTCYVKV 959
[Close]
BLAST of mRNA_L-elsbetiae_contig12670.2149.1 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 1.940e-8
Identity = 32/53 (60.38%), Postives = 35/53 (66.04%), Query Frame = 0 
Query:    1 MTFSGSSDVFFTDGVFETVPGGTCVIQIDDPSTVTIDANEDELTLADTCYVKV 53
            M  S SS V F +     V    CVIQ DDPSTVTIDA+EDELTL  +CYVKV
Sbjct: 1102 MMVSDSSTVSFNNLGLSLVEADACVIQADDPSTVTIDADEDELTLDGSCYVKV 1154
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12670.2149.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FUI8_ECTSI2.490e-1366.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFA6_9PHAE2.520e-1366.04F5/8 type C domain-containing protein n=2 Tax=Ecto... [more]
D7FZZ4_ECTSI2.430e-1062.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KL74_9PHAE1.940e-860.38F5/8 type C domain-containing protein n=3 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12670contigL-elsbetiae_contig12670:529..1035 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12670.2149.1mRNA_L-elsbetiae_contig12670.2149.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12670 462..1044 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12670.2149.1 ID=prot_L-elsbetiae_contig12670.2149.1|Name=mRNA_L-elsbetiae_contig12670.2149.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=57bp
MTFSGSSDVFFTDGVFETVPGGTCVIQIDDPSTVTIDANEDELTLADTCY
VKVDSA*
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