prot_L-elsbetiae_contig1265.2135.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1265.2135.1
Unique Nameprot_L-elsbetiae_contig1265.2135.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length645
Homology
BLAST of mRNA_L-elsbetiae_contig1265.2135.1 vs. uniprot
Match: A0A6H5KVW8_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVW8_9PHAE)

HSP 1 Score: 364 bits (935), Expect = 3.120e-110
Identity = 307/744 (41.26%), Postives = 364/744 (48.92%), Query Frame = 0
Query:   38 GRTCVSCRKSKVKCSKGSPCKRCSRLKLVCIAQVRGRGRPIASGISTTGPK----------KTAKSDGKAGGVGSTAGVGR------DSGSSHPSSXXXXXXXXXXGRGFLARSGVLSPTQPALRAGSEGATTVGGXXXGSIGASGVDARSSFGFSSPTTGIPPPIPATIT----GCSPSLGFNGPVRGLSAADDGGGLIVG---GLGGVGYG---------YQDFDPSSRPFPPHLLSAGRPLPSAAAQHQQQ------GAHGSF--SAAR---TYTHPLLHGGGASDGAPARMASAVGRALPTTSTAMRGSISS-GGSWRAVFHG-----------------------------------------------------------EDIGPXXXXXXXXXXXXXXXX-----------------------RAKGSSSLSSDGGFGGFGAKDLS-WAETVDEHKDAVAAXXXXXX----------------------GEEFLSKSTDEKSRWLMDVEQYAGASGADSEDRSPEANGGVVDPTDTIVTGFWKLFSEQEVHRPKAVLVIRHWALCALERRSTHLMRKTVDMARALCINVAEILNDYGIYAMFHELLREAEAGNTIEPARPVNLGPQEAPPYIQELLTQFAAVSTRVVLRGQSTFFHNEMCTRLFMSTERANEMYSSNRQASYLSDVWATLIHPDDHKSFFDSLSIELFRAPGHKSEFIKI--CKSTRARCYLRLCTF 630
            GRTCVSCRKSKVK              LVCIAQVRGRGRP+AS   T G K          +++K+ G A     +A V +      + GSSH +             G    SGVLS   P+L  G       GG    + G+SG  +      SS      PP+ A  +    G SPS  +       +AA DG G   G   G GGVG G          + F+  SR  PP ++ +G P  +   QH         G +G+   S+AR    +                   S  G      ++A  GSISS GGSWR  F G                                                           E   P          XXXXXX                       R KG SSLSSDGGF G G    S W E +DEH  AV  XXXXXX                      G  FLSKS D++ RWL+ VE+ A A+G DS  RSP ANGG VDPT+ IV+GFWKLF E  +HRPKAVLVIRHWALCAL+RRSTHLMR+TV MARAL INVAEILNDY IYAMFHELLREAEAGNTIEP  P  LG QE P YIQE+ + FAAVS RVVLRGQS+F HN++C RLF++T  ANEMY+ + Q     DVWAT IHPDDHK+FFD+LS++LFR PGH+SEF K+  C+      +L L  F
Sbjct:   85 GRTCVSCRKSKVKXXXXXXXXXXXXXXLVCIAQVRGRGRPVAS--VTAGKKSLKLVEDGVGRSSKNGGGADDTSRSARVAKSMAAEAEPGSSHANGSGSSSRESS---GASPSSGVLSCAHPSLAGGG------GGIDGATAGSSGSMSTRKVRLSSSVE--VPPLAAVASQISAGTSPSPLY-------AAAVDGEGSPRGDHGGDGGVGVGEGFLLAHHEQRHFEACSRALPPRIMQSGTPTIAPPQQHXXXXXXXXXGVYGALHNSSARPLSAHXXXXXXXXXXXXXXXXXXLSDGGSMTAMNASASPGSISSAGGSWRGEFIGGPGAAAHAVGGLGGMGEISRNDIDVPNGQWEYMNGTEVATTTAKLEGEVNAPTSSSSPAESFAPMPMGHMANSGXXXXXXXXXXXXXXXXEXXXXXXXXXXXXRGKGISSLSSDGGFNGAGKAPASTWVEAMDEHTHAVXXXXXXXXXXXXPTAGERGAXXXXXXXXPDGRIFLSKSEDKQQRWLIAVERGAEATGRDSGGRSPGANGGSVDPTEAIVSGFWKLFREHGIHRPKAVLVIRHWALCALDRRSTHLMRETVSMARALSINVAEILNDYSIYAMFHELLREAEAGNTIEPVPPAELGHQETPQYIQEMSSVFAAVSMRVVLRGQSSFHHNDVCGRLFLTTHEANEMYACDNQ-----DVWATCIHPDDHKAFFDNLSMQLFRTPGHQSEFKKVLKCRDRTGVVFLALVHF 803          
BLAST of mRNA_L-elsbetiae_contig1265.2135.1 vs. uniprot
Match: D7FVP7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVP7_ECTSI)

HSP 1 Score: 302 bits (773), Expect = 6.670e-87
Identity = 282/756 (37.30%), Postives = 338/756 (44.71%), Query Frame = 0
Query:    1 MKKRSR-EGGALKEQEHMNDSLSAPPKESSEEGKDDSGGRTCVSCRKSKVKCSKGSPCKRCSRLKLVCIAQVRGRGRPIASGISTTGPKKTAKSDGKAGGVGSTAGVGRDSGSSHPSSXXXXXXXXXXGRGFLARSG--------------------VLSPTQPALRAGSEGATTVGGXXXGSIGASGVDARSSFGFSSPTTGIPP--PIPATIT-GCSPS------LGFNGPVRGLSAADDGGGLIVGGLGGVGYGY-------QDFDPSSRPFPPHLLSAGRPLPSAAAQHQQ---QGAHGSF---SAARTYTHPL-LHGGGASDGAPARMASAVGRALPT-TSTAMRGSISS-GGSWRAVFHG--------------------EDIGPXXXXXXXXXXXXXXXX--------------------------------------------------------------------RAKGSSSLSSDGGFGGFGAKDLS-WAETVDEHKDAVAAXXXXXXGEEFLSKSTDEKSRWLMDVEQYAGASGADSEDRSPEANGGVVDPTDTIVTGFWKLFSEQEVHRPKAVLVIRHWALCALERRSTHLMRKTVDMARALCINVAEILNDYGIYAMFHELLREAEAGNTIEPARPVNLGPQEAPPYIQELLTQFAAVSTRVVLRGQSTFFHNEMCTRLFMSTERANEMYSSNRQASYLSDVWATLIHPDDHKSFFDSL---SIELFRAPGHKSEFIKICKS 618
            MKKR R +GG +KE++ MN   S+PP E  +   D+  G    S   S   C +G  C  C + KLVCIAQVRGRGRP+AS    T  KK+ K D    G  S  G G D  S               G                            VLS   P+L  G  G   + G   GS G+ G       G  S +  +PP   + + I  G SPS      L   G  RG    D G        GGVG G+       +  +  SR   P ++ +G P  +   QH     QG +G+    SA    THPL  HGGG           + G ++    ++A +GSISS GGSWR  F G                     DI                 X                                                                    R K  SSLSSDGGF G G    S W E +DEH  AVAA XXXX                       AG          P+   G VDPT+ IV+GFWKLF E EVHRPKAVLVIRHWALCAL+RRSTHLMR+TV MARAL INVAEILNDY IYAMFHELLREAEAGNTIEP  P  LG QE P YIQE+ + FAAVS RVVLRGQS+F HN++C RLF++T+ ANEMY+S+ Q     DVWAT IHPDDH+     L   ++    AP    E +++ +S
Sbjct:   33 MKKRPRGQGGGVKEEDDMN--YSSPPPEPKDSLSDE--GDQAASSNSSAGACGEGRTCVSCRKSKLVCIAQVRGRGRPVAS---MTAGKKSLKLDEDRVGRSSKNGGGADDTSRSARVAKSVGAEEEPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSSAHPSLAGGGGGG--IDGSTTGSSGSMGTRT----GQPSSSVEVPPLAAVASQIAAGTSPSPLYAAALDGEGSPRGDHGGDGG--------GGVGEGFLLAPLEQRHLEACSRALSPRIMQSGIPTIAPPQQHXXXXXQGVYGALHNSSARPLSTHPLQFHGGGXXXXXXXXXXXSDGGSMAAMNASAAQGSISSAGGSWRGAFLGGPGPAAHAVGGLGGTGEVSRNDIDTPNGQWEYMNTPSVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRRGKCISSLSSDGGFNGAGKVAASTWVEAMDEHTHAVAAGXXXX----------------XXXXXPTAGXXXXXXXXXXPD---GSVDPTEAIVSGFWKLFREHEVHRPKAVLVIRHWALCALDRRSTHLMRETVSMARALSINVAEILNDYSIYAMFHELLREAEAGNTIEPVPPAELGHQETPQYIQEMSSVFAAVSMRVVLRGQSSFHHNDVCGRLFLTTQEANEMYASDNQ-----DVWATCIHPDDHQDLLRQLIDAALPYSWAPVRVQESVEVMQS 743          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1265.2135.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KVW8_9PHAE3.120e-11041.26Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7FVP7_ECTSI6.670e-8737.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 35..78
e-value: 0.0015
score: 27.8
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 41..68
e-value: 3.6E-5
score: 23.8
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 40..67
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 40..69
score: 9.578
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 36..93
e-value: 8.3E-6
score: 27.6
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 39..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1265contigL-elsbetiae_contig1265:1375..7207 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1265.2135.1mRNA_L-elsbetiae_contig1265.2135.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1265 1369..7887 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1265.2135.1 ID=prot_L-elsbetiae_contig1265.2135.1|Name=mRNA_L-elsbetiae_contig1265.2135.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=645bp
MKKRSREGGALKEQEHMNDSLSAPPKESSEEGKDDSGGRTCVSCRKSKVK
CSKGSPCKRCSRLKLVCIAQVRGRGRPIASGISTTGPKKTAKSDGKAGGV
GSTAGVGRDSGSSHPSSNSNSNSNSGSGRGFLARSGVLSPTQPALRAGSE
GATTVGGGGGGSIGASGVDARSSFGFSSPTTGIPPPIPATITGCSPSLGF
NGPVRGLSAADDGGGLIVGGLGGVGYGYQDFDPSSRPFPPHLLSAGRPLP
SAAAQHQQQGAHGSFSAARTYTHPLLHGGGASDGAPARMASAVGRALPTT
STAMRGSISSGGSWRAVFHGEDIGPGPGNGTGNGNGTGTGPRAKGSSSLS
SDGGFGGFGAKDLSWAETVDEHKDAVAAAAAAAGGEEFLSKSTDEKSRWL
MDVEQYAGASGADSEDRSPEANGGVVDPTDTIVTGFWKLFSEQEVHRPKA
VLVIRHWALCALERRSTHLMRKTVDMARALCINVAEILNDYGIYAMFHEL
LREAEAGNTIEPARPVNLGPQEAPPYIQELLTQFAAVSTRVVLRGQSTFF
HNEMCTRLFMSTERANEMYSSNRQASYLSDVWATLIHPDDHKSFFDSLSI
ELFRAPGHKSEFIKICKSTRARCYLRLCTFGTSSRTRATTRPSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf