prot_L-elsbetiae_contig12636.2131.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12636.2131.1
Unique Nameprot_L-elsbetiae_contig12636.2131.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length323
Homology
BLAST of mRNA_L-elsbetiae_contig12636.2131.1 vs. uniprot
Match: D7FNU4_ECTSI (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNU4_ECTSI)

HSP 1 Score: 392 bits (1007), Expect = 5.220e-133
Identity = 238/317 (75.08%), Postives = 256/317 (80.76%), Query Frame = 0
Query:    7 VTNGGAAAKAGVRVNDVVVSIDGSNDSVAYKDLIQIIGALARPVRVGFQRGGXXXXXXXXXXXXXXXARGQEPGPLQRAQDAARRKMDELKGPPQPPPMTEEAKAERREAALKAAESRTKDWGKRLDKGRQASQTKSATGGVVENQFEDSDNAETRRMVELAKQQEARTAASMGYNPYEARLMGNTAARAAISGAGDSGAGAPLAPPPAPGRQAASTEXXXXXXXXXXXXPAAPAEETDEWVGEEAVMADAYGAEIEGALGAVLEQGPGVSLTAVTTMLKMMKNMSANFEEDKFKRIRLGNANFNSKVGGIDGGLEV 323
            V+NGGAAAKAGVRVND + +IDG+    A++DL+ ++ A+ RPV +GF R G               A  QEPGP QRAQDAARRKMDE+KGPPQPPPMT EAKAERREAALKAAESRTKDW KRL+KGRQASQTKS TGGV ENQFEDS NAETRRMVELAKQQEARTA+SMGYNPYEARLMGNTAARAAISGAGDSGAGAPL  P           XXXXXXXXXXXX  A   E +EW+GEEA MADA  AEIEGALGAVLEQ PGVSLTAVTTMLKMMKNM+A   +DKFKRIRLGNANFNSKVGGIDGGLEV
Sbjct:   22 VSNGGAAAKAGVRVNDTIAAIDGNASPAAHEDLVDVVRAIGRPVVIGFHRSGGGGKEAKGAG-----ATAQEPGPFQRAQDAARRKMDEIKGPPQPPPMTAEAKAERREAALKAAESRTKDWNKRLNKGRQASQTKSGTGGVTENQFEDSGNAETRRMVELAKQQEARTASSMGYNPYEARLMGNTAARAAISGAGDSGAGAPLTSPXX------XXXXXXXXXXXXXXXXTANLGEKEEWIGEEAAMADAVAAEIEGALGAVLEQEPGVSLTAVTTMLKMMKNMTAKSSDDKFKRIRLGNANFNSKVGGIDGGLEV 327          
BLAST of mRNA_L-elsbetiae_contig12636.2131.1 vs. uniprot
Match: A0A4D9D7Q3_9STRA (PDZ domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7Q3_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 2.750e-14
Identity = 92/328 (28.05%), Postives = 142/328 (43.29%), Query Frame = 0
Query:    6 SVTNGGAAAKAGVRVNDVVVSIDGSNDSVAYKDLIQIIGALARPVRVGFQRGGXXXXXXXXXXXXXXXARGQEPGPLQRAQDAARRKMDELKGPPQPPPMTEEAKAERREAALKAAESRTKDWGKRLDKGRQASQTKSATGGVVENQFEDSDNAETRRMVELAKQQEARTAASMGYNPYEARLMGNTAARAAISGAGDSGAGA----------PLAPPPAPGRQAASTEXXXXXXXXXXXXPAAPAEETDEWVGEEAVMADAYGAEIEGALGAVLEQGPGVSLTAVTTMLKMMKNMSANFEEDKFKRIRLGNANFNSKVGGIDGGLEV 323
            S+ +GGAA++ GV + D+V+S+DG N   +Y+ L   + A+ RPV   F R G                           Q  A          P  PP  E    ERR   L AAE R++ W +++ +     +  S   G   ++F  +D+  T+  V   K  EA   A++GYNPYE+  M    A A I  AG + +G+          PL   P P      T              A  ++E  E    EA  A   G E + A+  +L++       A +T+L ++ N+ A+   +KF+R+RL NA F SKV  + G +++
Sbjct:   74 SLVSGGAASRKGVHIGDIVISVDG-NPVTSYESLEVALCAMERPVTFSFHRSGTSDL----------------------VQPVAH---------PTLPPSDESGDVERRRRILTAAEERSRAWDRKVQRAGGNHRGTSKKSGEGLDRFGANDDEATKAQVAQIKNFEAAQTAALGYNPYESHSMSRAQALARIELAGPTPSGSNSRTSAAALSPLNSQPHPPPSWTPTSLSPSLSGDRRPLVAPLSQE--ELESPEAFQA---GEEADSAMALMLDRPSPAWRAAASTVLTILGNVLADPAHEKFRRVRLQNAAFQSKVVAVPGAVDM 364          
BLAST of mRNA_L-elsbetiae_contig12636.2131.1 vs. uniprot
Match: A0A7S2DP17_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DP17_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 7.110e-12
Identity = 89/312 (28.53%), Postives = 146/312 (46.79%), Query Frame = 0
Query:   17 GVRVNDVVVSIDGSNDSVAYKDLIQIIGALARPVRVGFQRGGXXXXXXXXXXXXXXXARGQEPGPLQRAQDAARRKMDELKGPPQPPPMTEEAKAERREAALKAAESRTKDWGKRL-----DKGRQASQTKSATGGVVENQFEDSDNAETRRMVELAKQQEARTAASMGYNPYEARLMGNTAARAAISGAGDSGAGAPLAPPPAPGRQAASTEXXXXXXXXXXXXPAAPAEETDEWVGEEAVMADAYGAE-IEGALGAVLEQGPGVSLTAVTTMLKMMKNMSANFEEDKFKRIRLGNANFNSKVGGIDGGLE 322
            GV+V   +V+IDG+   + +      I ++ RPV + FQ                  A+  + GP+          + + KGP    P++    A RREA+LKAAESR   W K+L     +KGRQA   K++ G   + +     +AE++R+ + A+ +E RT   +GYNPY++++  +                                 XXXXXXX      A+P    D +        D++  E ++ ALG +  Q P ++  AVTT+LK++ N+   FE++K  R+R+ N  F  KV  ++GG++
Sbjct:   77 GVQVGHRIVAIDGN--PIKFSQFSSFIQSMPRPVVLTFQ----------------GVAKKPKKGPMS---------VLKKKGPD---PLSARENAIRREASLKAAESRGNAWDKKLGATRREKGRQAQAEKASMGANNDAEM----SAESKRVFDAARAKETRTTNELGYNPYQSQISSSXXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXSSLSQQASPHGAGDPF--------DSFTVEAMDMALGLISSQPPQIAKEAVTTLLKLLNNLETKFEDEKVHRVRVANKTFAKKVASVNGGID 339          
BLAST of mRNA_L-elsbetiae_contig12636.2131.1 vs. uniprot
Match: K3X842_GLOUD (PUB domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X842_GLOUD)

HSP 1 Score: 61.2 bits (147), Expect = 6.080e-7
Identity = 70/244 (28.69%), Postives = 106/244 (43.44%), Query Frame = 0
Query:   99 PPQPPPMTEEAKAERREAALKAAESRTKDWGKRLDKGRQASQTKSATGGVVENQFEDSD-------------------NAETRRMVELAKQQEARTAASMGYNPYEARLMGNTAARAAISGAGDSGAGAPLAPPPAPGRQAASTEXXXXXXXXXXXXPAAPAEETDEWVGEEAVMADAYGAEIEGALGAVLEQGPGVSLTAVTTMLKMMKNMSANFEEDKFKRIRLGNANFNSKVGGIDGGLEV 323
            P  PPP+TEE +  RREA LKA ESRT  W KR++  R+    + A                                +AE  +  E+   Q     A +G+NPY A    +T A   ++      A      P     + A   XXXXX       PAA          + ++  +  G    GA+  +L Q P  ++TA  T++KM+ N+  N  E+K+++IRL NA+  SK+  ++G  E+
Sbjct:   68 PAAPPPLTEEEQKARREAQLKAVESRTNAWDKRVNNARKVRMQQEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVLSAEEMKAFEIQNAQ-----AQVGFNPYAATFSSSTEASTVMNSISSGAA------PXXXXXRVAXXXXXXXXSSFPAIPPAA----------DPSMDLEPNGT---GAVYVLLRQDPVRAITAAETIIKMLNNIQNNPTEEKYRKIRLSNASIQSKLVAVNGAAEI 287          
BLAST of mRNA_L-elsbetiae_contig12636.2131.1 vs. uniprot
Match: A0A7S2US51_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US51_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 2.050e-6
Identity = 29/63 (46.03%), Postives = 43/63 (68.25%), Query Frame = 0
Query:  261 EIEGALGAVLEQGPGVSLTAVTTMLKMMKNMSANFEEDKFKRIRLGNANFNSKVGGIDGGLEV 323
            E+E A+  ++ QG   S+ A+ T+ K++KN+    EE+KF+RIRL N  FNSKV  I GG+E+
Sbjct:    6 EVEDAIAILMGQGLDASVNAMKTVSKLVKNIIKTPEEEKFRRIRLNNQAFNSKVVSIQGGMEL 68          
BLAST of mRNA_L-elsbetiae_contig12636.2131.1 vs. uniprot
Match: A0A7S3JPU7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JPU7_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 7.210e-5
Identity = 60/220 (27.27%), Postives = 92/220 (41.82%), Query Frame = 0
Query:  110 KAERREAALKAAESRTKDWGKRLDKGRQASQTKSATGGVVENQFEDSDNAETRRMVELAKQQEARTAASMGYNPYEARLMGNTAARAAISGAGDSGAGAPLAPPPAPGRQAASTEXXXXXXXXXXXXPAAPAEETDEWV----GEEAVMADAYGAEIEGALGAVLEQGPGVSL--TAVTTMLKMMKNMSANFEEDKFKRIRLGNANFNSKVGGIDGGLEV 323
            K  RR A  KAA  R   W +R+    Q  +  +    V   +  +  N ETR   E A Q+ A     +GY+PY+  L G +A+  + S            PPP                           ++ DE       +E+   D    E++ AL A+     G       V T+LK++ N+  N  ++KF+R+RL NAN  +K+  I+GGLE+
Sbjct:  144 KEARRVAQAKAALERDGAWNRRVASRPQGGKLANTRNPVSSTEEANLSNPETRAAWEAAAQRHAEQTRELGYDPYKPLLTGTSASSQSAS-----------RPPP---------------------------QKKDEGTRLGGNDESKDYDTASTEVQVALQALASSDKGTEAQEACVATLLKLLDNV-LNKTDEKFRRVRLANANIQAKILEIEGGLEI 324          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12636.2131.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FNU4_ECTSI5.220e-13375.08PDZ domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A4D9D7Q3_9STRA2.750e-1428.05PDZ domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S2DP17_9STRA7.110e-1228.53Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
K3X842_GLOUD6.080e-728.69PUB domain-containing protein n=1 Tax=Globisporang... [more]
A0A7S2US51_9STRA2.050e-646.03Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3JPU7_9STRA7.210e-527.27Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.2190coord: 263..323
e-value: 1.2E-9
score: 39.6
NoneNo IPR availableGENE3D2.30.42.10coord: 5..60
e-value: 9.1E-7
score: 30.8
IPR018997PUB domainPFAMPF09409PUBcoord: 278..322
e-value: 1.3E-8
score: 34.6
IPR001478PDZ domainPROSITEPS50106PDZcoord: 1..58
score: 8.607
IPR036339PUB-like domain superfamilySUPERFAMILY143503PUG domain-likecoord: 271..322
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 6..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12636contigL-elsbetiae_contig12636:1341..5269 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12636.2131.1mRNA_L-elsbetiae_contig12636.2131.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12636 1341..5269 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12636.2131.1 ID=prot_L-elsbetiae_contig12636.2131.1|Name=mRNA_L-elsbetiae_contig12636.2131.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=323bp
MLAPPSVTNGGAAAKAGVRVNDVVVSIDGSNDSVAYKDLIQIIGALARPV
RVGFQRGGGGGGAGGKARGGGGGARGQEPGPLQRAQDAARRKMDELKGPP
QPPPMTEEAKAERREAALKAAESRTKDWGKRLDKGRQASQTKSATGGVVE
NQFEDSDNAETRRMVELAKQQEARTAASMGYNPYEARLMGNTAARAAISG
AGDSGAGAPLAPPPAPGRQAASTEAATAAAGGAGARPAAPAEETDEWVGE
EAVMADAYGAEIEGALGAVLEQGPGVSLTAVTTMLKMMKNMSANFEEDKF
KRIRLGNANFNSKVGGIDGGLEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018997PUB_domain
IPR001478PDZ
IPR036339PUB-like_dom_sf
IPR036034PDZ_sf