prot_L-elsbetiae_contig1262.2113.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1262.2113.1
Unique Nameprot_L-elsbetiae_contig1262.2113.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length173
Homology
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BLAST of mRNA_L-elsbetiae_contig1262.2113.1 vs. uniprot
Match: A0A6H5K7N3_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7N3_9PHAE)

HSP 1 Score: 230 bits (587), Expect = 1.570e-74
Identity = 120/170 (70.59%), Postives = 136/170 (80.00%), Query Frame = 0 
Query:    1 KEDDKFGFTGQVLAAVVVTAVAGNILGARRFRKTMTDTVSRNAQRRKAEADRAARAARDXXXXXXXXXXXXPLDGHPLRGRLPKGWEFDDAREAAFAEKRLNSQVVQHLSTLGVKSFVAGSEEVKVAYRGRAMDLHPDRYRRNSAKGNEREFKKVAESYAWLDDNYFRRR 170
            ++ +KF FTGQVL A+VVTA AG+I GARRFRKTMTDTVSRNAQRRKAEA+ AARAARD              DGHP  GR+PKGWEFDD+REAAFAE+RLNSQVVQHLS LGV+SFVAGS+EVK AYRG+AM LHPDR   +S+K + +EF KVA SY WLD NYFRRR
Sbjct:   21 EDKEKFAFTGQVLTAIVVTAAAGSIFGARRFRKTMTDTVSRNAQRRKAEAESAARAARDRAAARANAGGA--ADGHPFPGRIPKGWEFDDSREAAFAEQRLNSQVVQHLSALGVRSFVAGSDEVKAAYRGKAMALHPDRRSADSSKQSGQEFMKVAASYEWLDKNYFRRR 188
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1262.2113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K7N3_9PHAE1.570e-7470.59J domain-containing protein n=2 Tax=Ectocarpus Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 40..60
NoneNo IPR availablePANTHERPTHR43948FAMILY NOT NAMEDcoord: 106..169
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..172
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availableTMHMMTMhelixcoord: 6..28
IPR001623DnaJ domainSMARTSM00271dnaj_3coord: 106..167
e-value: 0.0099
score: 24.2
IPR001623DnaJ domainPFAMPF00226DnaJcoord: 110..168
e-value: 3.0E-9
score: 36.9
IPR001623DnaJ domainPROSITEPS50076DNAJ_2coord: 107..172
score: 11.503
IPR036869Chaperone J-domain superfamilyGENE3D1.10.287.110coord: 87..167
e-value: 6.4E-11
score: 44.0
IPR036869Chaperone J-domain superfamilySUPERFAMILY46565Chaperone J-domaincoord: 107..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1262contigL-elsbetiae_contig1262:817..4033 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1262.2113.1mRNA_L-elsbetiae_contig1262.2113.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1262 817..4033 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1262.2113.1 ID=prot_L-elsbetiae_contig1262.2113.1|Name=mRNA_L-elsbetiae_contig1262.2113.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=173bp
KEDDKFGFTGQVLAAVVVTAVAGNILGARRFRKTMTDTVSRNAQRRKAEA
DRAARAARDRAAAGGGGAAGGPLDGHPLRGRLPKGWEFDDAREAAFAEKR
LNSQVVQHLSTLGVKSFVAGSEEVKVAYRGRAMDLHPDRYRRNSAKGNER
EFKKVAESYAWLDDNYFRRRGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001623DnaJ_domain
IPR036869J_dom_sf