prot_L-elsbetiae_contig126.2097.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig126.2097.1
Unique Nameprot_L-elsbetiae_contig126.2097.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length236
Homology
BLAST of mRNA_L-elsbetiae_contig126.2097.1 vs. uniprot
Match: A0A6H5JLZ3_9PHAE (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLZ3_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 3.760e-72
Identity = 113/129 (87.60%), Postives = 119/129 (92.25%), Query Frame = 0
Query:    5 REVKLPGKDSNSPQSFAFGTPYVEIRDFLARQNEALFRRNSVLGLLERDAATKRAPERWQSLDSEDVASFDVVVCFESRVFDLVVEDLHQRDPDTFKPLHVVSMTIRDSAEDSTAAAGDVLEMCKMVNE 133
            REV+LPGKDS SPQSF FGTPYVEIRDFLARQNEALFRRNSVLGLLER+A TKRAPERWQSLD   VASFDVVVCFESRVFDLVVEDL QRDPDTFKPLHVVSMTIRDSA DS AAAGDVL++CKM+ +
Sbjct:   20 REVRLPGKDSKSPQSFPFGTPYVEIRDFLARQNEALFRRNSVLGLLERNATTKRAPERWQSLDGGHVASFDVVVCFESRVFDLVVEDLQQRDPDTFKPLHVVSMTIRDSANDSAAAAGDVLDLCKMLED 148          
BLAST of mRNA_L-elsbetiae_contig126.2097.1 vs. uniprot
Match: D8LTB5_ECTSI (Protein-serine/threonine phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTB5_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 9.260e-43
Identity = 79/88 (89.77%), Postives = 82/88 (93.18%), Query Frame = 0
Query:    5 REVKLPGKDSNSPQSFAFGTPYVEIRDFLARQNEALFRRNSVLGLLERDAATKRAPERWQSLDSEDVASFDVVVCFESRVFDLVVEDL 92
            REV+LPGKDS SPQSF FGTPYVEIRDFLARQNEALFRRNSVLGLLER+A TKRAPERWQSLD E VASFDVVVCFESRVFDLVVE +
Sbjct:  176 REVRLPGKDSKSPQSFPFGTPYVEIRDFLARQNEALFRRNSVLGLLERNATTKRAPERWQSLDGEHVASFDVVVCFESRVFDLVVEGI 263          
BLAST of mRNA_L-elsbetiae_contig126.2097.1 vs. uniprot
Match: A0A6H5KZG9_9PHAE (Protein-serine/threonine phosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZG9_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 2.480e-42
Identity = 76/128 (59.38%), Postives = 102/128 (79.69%), Query Frame = 0
Query:    5 REVKLPGKDSNSPQSFAFGTPYVEIRDFLARQNEALFRRNSVLGLLERDAATKRAPERWQSLDSEDVASFDVVVCFESRVFDLVVEDLHQRDPDTFKPLHVVSMTIRDSAEDSTAAAGDVLEMCKMVN 132
            REV+LPGKD  SP+ F FGTPY +I D L  ++EALF +N++L L+ R+A  K AP+R+Q ++  D+A FDVV+CFE+RVF LVVEDL  RDP+TFKPLHV++MTI+DS E+S AAA  VLE+C+M++
Sbjct:  234 REVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQEIEGPDMADFDVVLCFETRVFYLVVEDLQSRDPETFKPLHVINMTIKDSFEESAAAADSVLELCRMLD 361          
BLAST of mRNA_L-elsbetiae_contig126.2097.1 vs. uniprot
Match: A0A835Z2K1_9STRA (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2K1_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.920e-35
Identity = 61/126 (48.41%), Postives = 87/126 (69.05%), Query Frame = 0
Query:    6 EVKLPGKDSNSPQSFAFGTPYVEIRDFLARQNEALFRRNSVLGLLERDAATKRAPERWQSLDSEDVASFDVVVCFESRVFDLVVEDLHQRDPDTFKPLHVVSMTIRDSAEDSTAAAGDVLEMCKMV 131
            +VKLPG+    P  F FGTPY+E+ D L   ++ L+ RN VL LL RDA TKR PERWQ L S  V ++DVV+CFE+R+FD+ V+DL  RD   FKP+ ++S+ ++D+ +D+  A  DV  +C+M+
Sbjct:   32 DVKLPGRSRGEPAVFPFGTPYIEMHDILWAADKQLYTRNGVLRLLARDACTKRHPERWQDLPSAAVVAYDVVICFENRIFDICVQDLQDRDALDFKPISLISVPVKDTPQDAEEAMEDVTSLCEML 157          
BLAST of mRNA_L-elsbetiae_contig126.2097.1 vs. uniprot
Match: A0A024U5D3_9STRA (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=10 Tax=Aphanomyces TaxID=100860 RepID=A0A024U5D3_9STRA)

HSP 1 Score: 127 bits (320), Expect = 4.110e-33
Identity = 58/126 (46.03%), Postives = 84/126 (66.67%), Query Frame = 0
Query:    7 VKLPGKDSNSPQSFAFGTPYVEIRDFLARQNEALFRRNSVLGLLERDAATKRAPERWQSLDSEDVASFDVVVCFESRVFDLVVEDLHQRDPDTFKPLHVVSMTIRDSAEDSTAAAGDVLEMCKMVN 132
            V+ PG +   P+ F F TPY  +   L  +NE LFRRN VL +LERD  TK+AP++WQ    +D+A  DV++CFE R+FD+V+EDL  R P  F+PLH++ + I+D+ ED+       L++CKM+N
Sbjct:   40 VRFPGPNLYEPRIFPFFTPYEVMYRELKSENEPLFRRNGVLAMLERDIITKKAPQKWQDNTVDDLAKLDVILCFEDRIFDIVMEDLQLRKPKDFRPLHLICLNIKDTPEDAKIGGSLALDLCKMIN 165          
BLAST of mRNA_L-elsbetiae_contig126.2097.1 vs. uniprot
Match: A0A425CYI4_9STRA (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A425CYI4_9STRA)

HSP 1 Score: 125 bits (315), Expect = 7.840e-33
Identity = 56/127 (44.09%), Postives = 85/127 (66.93%), Query Frame = 0
Query:    7 VKLPGKDSNSPQSFAFGTPYVEIRDFLARQNEALFRRNSVLGLLERDAATKRAPERWQSLDSEDVASFDVVVCFESRVFDLVVEDLHQRDPDTFKPLHVVSMTIRDSAEDSTAAAGDVLEMCKMVNE 133
            V+ PG +   P+ F F TPY  +   L  +NE LFRRN VL +LERD  TK+AP++WQ    +++A  DVV+CFE R+FD+V+EDL  R P  F+P+HV+ + I+D+ +D+       L++CK++N+
Sbjct:    2 VRFPGPNPYEPRIFPFFTPYEVMYRELKSENEQLFRRNGVLAMLERDIITKKAPQKWQGNSMDELAKLDVVLCFEDRIFDIVMEDLQLRKPKDFRPIHVICLDIKDTPKDAKIGGSLALDLCKLIND 128          
BLAST of mRNA_L-elsbetiae_contig126.2097.1 vs. uniprot
Match: A0A1V9Z3Q7_9STRA (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z3Q7_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.800e-31
Identity = 58/127 (45.67%), Postives = 80/127 (62.99%), Query Frame = 0
Query:    6 EVKLPGKDSNSPQSFAFGTPYVEIRDFLARQNEALFRRNSVLGLLERDAATKRAPERWQSLDSEDVASFDVVVCFESRVFDLVVEDLHQRDPDTFKPLHVVSMTIRDSAEDSTAAAGDVLEMCKMVN 132
            +V+ PG+    P  + F TPY  +   L  +NE+LFR N VL +LERD  TK+AP+RWQ     D+A  DVVVCFE R+FD+V+EDL  R P  F PLHV+ + I+D+ +D+       L +CK +N
Sbjct:   39 KVRFPGRSLYEPHIYEFYTPYETMYRELKAENESLFRHNGVLAMLERDILTKKAPQRWQDNSVHDLAQLDVVVCFEDRIFDIVLEDLQLRKPHAFHPLHVICLDIKDTPQDAIIGGTLALTLCKKIN 165          
BLAST of mRNA_L-elsbetiae_contig126.2097.1 vs. uniprot
Match: T0QKZ0_SAPDV (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QKZ0_SAPDV)

HSP 1 Score: 121 bits (304), Expect = 2.310e-30
Identity = 55/127 (43.31%), Postives = 82/127 (64.57%), Query Frame = 0
Query:    6 EVKLPGKDSNSPQSFAFGTPYVEIRDFLARQNEALFRRNSVLGLLERDAATKRAPERWQSLDSEDVASFDVVVCFESRVFDLVVEDLHQRDPDTFKPLHVVSMTIRDSAEDSTAAAGDVLEMCKMVN 132
            +V+ PG+    P  + F TPY  +   L  +NEALFR N VL +LERD  TK+AP++WQ   + D+A  DVVVCFE R+FD+V+EDL  R P+ F  +HV+ + I+D+ +D+       L++C+ +N
Sbjct:   71 KVRFPGRSRYEPHIYEFFTPYEVMYRELKAENEALFRHNGVLAMLERDILTKKAPQKWQDNSTTDLAQLDVVVCFEDRIFDIVLEDLQLRKPNAFHAIHVICLDIKDTPQDAVIGGALALKLCQKIN 197          
BLAST of mRNA_L-elsbetiae_contig126.2097.1 vs. uniprot
Match: A0A1V9ZWY5_9STRA (Protein-serine/threonine phosphatase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWY5_9STRA)

HSP 1 Score: 122 bits (305), Expect = 4.520e-28
Identity = 57/126 (45.24%), Postives = 81/126 (64.29%), Query Frame = 0
Query:    6 EVKLPGKDSNSPQSFAFGTPYVEIRDFLARQNEALFRRNSVLGLLERDAATKRAPERWQSLDSEDVASFDVVVCFESRVFDLVVEDLHQRDPDTFKPLHVVSMTIRDSAEDSTAAAGDVLEMCKMV 131
            +V+ PG+    P  F F TPY  +   L  +NEALFR N VL +LERD  TK+AP+RWQ     D+A+ DVVVCFE R+FD+V+EDL  R P +F P+HV+ + I+D+ +D+       L +C+ +
Sbjct:   39 KVRFPGRSRYEPHIFEFFTPYEAMYRELKSENEALFRHNGVLAMLERDILTKKAPQRWQDNSVTDLAAIDVVVCFEDRIFDIVLEDLQLRKPISFHPIHVICLDIKDTPQDAIVGGTLALNLCQRI 164          
BLAST of mRNA_L-elsbetiae_contig126.2097.1 vs. uniprot
Match: A0A7S3LPN9_9STRA (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LPN9_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.020e-27
Identity = 54/131 (41.22%), Postives = 87/131 (66.41%), Query Frame = 0
Query:    6 EVKLPGKDSNSPQSFAFGTPYVEIRDFLARQNEAL-FRRNSVLGLLERDAATKRAPERWQSLDSEDVASFDVVVCFESRVFDLVVEDLHQRDPDTFKPLHVVSMTIRDSAEDSTAAAGDVLEMCKMVNEPA 135
            +++LPG      + F FGTPY  I+D L     A  FR+  +L +L+R+ + K  PERWQ ++S ++A  DVV CFE RVFDL++EDL  R+P  F+P+HV+++ ++D+A+++  A    LE+CK++ + A
Sbjct:  113 QIRLPGPGGQ--EVFDFGTPYQTIKDTLVSGGHAQWFRQRGLLAMLDRNISIKEGPERWQEMESSEIAKLDVVFCFEGRVFDLLIEDLEGREPQEFEPIHVLNLEVKDNADEAAIAGQICLELCKLLQKYA 241          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig126.2097.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLZ3_9PHAE3.760e-7287.60RNA polymerase II subunit A C-terminal domain phos... [more]
D8LTB5_ECTSI9.260e-4389.77Protein-serine/threonine phosphatase n=1 Tax=Ectoc... [more]
A0A6H5KZG9_9PHAE2.480e-4259.38Protein-serine/threonine phosphatase n=1 Tax=Ectoc... [more]
A0A835Z2K1_9STRA1.920e-3548.41RNA polymerase II subunit A C-terminal domain phos... [more]
A0A024U5D3_9STRA4.110e-3346.03RNA polymerase II subunit A C-terminal domain phos... [more]
A0A425CYI4_9STRA7.840e-3344.09RNA polymerase II subunit A C-terminal domain phos... [more]
A0A1V9Z3Q7_9STRA1.800e-3145.67RNA polymerase II subunit A C-terminal domain phos... [more]
T0QKZ0_SAPDV2.310e-3043.31RNA polymerase II subunit A C-terminal domain phos... [more]
A0A1V9ZWY5_9STRA4.520e-2845.24Protein-serine/threonine phosphatase n=1 Tax=Thrau... [more]
A0A7S3LPN9_9STRA1.020e-2741.22RNA polymerase II subunit A C-terminal domain phos... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2300coord: 34..138
e-value: 1.2E-20
score: 75.6
NoneNo IPR availablePANTHERPTHR20383:SF9RNA POLYMERASE II SUBUNIT A C-TERMINAL DOMAIN PHOSPHATASE SSU72coord: 5..133
IPR006811RNA polymerase II subunit APFAMPF04722Ssu72coord: 6..134
e-value: 1.9E-36
score: 125.4
IPR006811RNA polymerase II subunit APANTHERPTHR20383FAMILY NOT NAMEDcoord: 5..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig126contigL-elsbetiae_contig126:46236..51090 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig126.2097.1mRNA_L-elsbetiae_contig126.2097.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig126 46084..52023 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig126.2097.1 ID=prot_L-elsbetiae_contig126.2097.1|Name=mRNA_L-elsbetiae_contig126.2097.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=236bp
MKNCREVKLPGKDSNSPQSFAFGTPYVEIRDFLARQNEALFRRNSVLGLL
ERDAATKRAPERWQSLDSEDVASFDVVVCFESRVFDLVVEDLHQRDPDTF
KPLHVVSMTIRDSAEDSTAAAGDVLEMCKMVNEPAGGKIVRLREHDRFLG
VAKVLRYEAWSGAERNRCGPRGSLPPRTMPVSCGWRGLGLPEEEITHRRQ
IDLFSWVLTTFLVENVGRAPDQPPGLSRMAKNGMS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006811RNA_pol_II_suA