prot_L-elsbetiae_contig12592.2089.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12592.2089.1
Unique Nameprot_L-elsbetiae_contig12592.2089.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length129
Homology
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BLAST of mRNA_L-elsbetiae_contig12592.2089.1 vs. uniprot
Match: D8LTI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTI5_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 2.230e-38
Identity = 80/121 (66.12%), Postives = 96/121 (79.34%), Query Frame = 0 
Query:   11 SSSRASPTGRAQPKHPYGRRNTFIGSYTRHGLGYCTAGRDEALTNTRFRDLPSRERRLYTLTLGYGLREDSKS-----VKRVRKPE-MSRGNAVALMARLQEMMLHEGRTVEGIFAALGLD 125
            S+S  S T   + KHPYGRRNT + SYTRHGLG+ TA RDE+LT T+FRDLPSRERRLYTLT+GYGLR D+KS      KR R+   MS+G+AVALMARL EM+ H+GRTVEG+F+ALG+D
Sbjct:   31 STSCTSATELTRQKHPYGRRNTLVRSYTRHGLGFATADRDESLTVTKFRDLPSRERRLYTLTMGYGLRADNKSGFSGDCKRQRQQSGMSKGHAVALMARLHEMLRHDGRTVEGVFSALGVD 151
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12592.2089.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTI5_ECTSI2.230e-3866.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12592contigL-elsbetiae_contig12592:1294..1680 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12592.2089.1mRNA_L-elsbetiae_contig12592.2089.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12592 1294..1680 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12592.2089.1 ID=prot_L-elsbetiae_contig12592.2089.1|Name=mRNA_L-elsbetiae_contig12592.2089.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=129bp
GRGGVPGPATSSSRASPTGRAQPKHPYGRRNTFIGSYTRHGLGYCTAGRD
EALTNTRFRDLPSRERRLYTLTLGYGLREDSKSVKRVRKPEMSRGNAVAL
MARLQEMMLHEGRTVEGIFAALGLDSRY*
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