prot_L-elsbetiae_contig1258.2081.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig1258.2081.1
Unique Name	prot_L-elsbetiae_contig1258.2081.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	65

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig1258.2081.1 vs. uniprot
Match: A0A6H5JY39_9PHAE (Ion_trans_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY39_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 1.210e-11
Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 0

Query:    2 RVVLPLLKPATFALGEIIVTPKVGIREMGFIMSGEVEVR 40
            RVVLPLLKPATFALGE+IVTPK+G REMGFI+ GEVEV+
Sbjct:  204 RVVLPLLKPATFALGEVIVTPKIGTREMGFIICGEVEVK 242

[Close]

BLAST of mRNA_L-elsbetiae_contig1258.2081.1 vs. uniprot
Match: D8LFK4_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK4_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 5.280e-11
Identity = 32/39 (82.05%), Postives = 37/39 (94.87%), Query Frame = 0

Query:    2 RVVLPLLKPATFALGEIIVTPKVGIREMGFIMSGEVEVR 40
            RVVLPLLKPATFA+GE+IVTPK+G REMGFI+ GEVEV+
Sbjct: 1167 RVVLPLLKPATFAVGEVIVTPKIGTREMGFIICGEVEVK 1205

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1258.2081.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1258.2081.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JY39_9PHAE	1.210e-11	84.62	Ion_trans_2 domain-containing protein n=1 Tax=Ecto...	[more]
D8LFK4_ECTSI	5.280e-11	82.05	Cyclic nucleotide-binding domain-containing protei...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10		coord: 1..65 e-value: 2.8E-7 score: 32.4
IPR000595	Cyclic nucleotide-binding domain	PROSITE	PS50042	CNMP_BINDING_3	coord: 1..65 score: 8.934
IPR018490	Cyclic nucleotide-binding-like	SUPERFAMILY	51206	cAMP-binding domain-like	coord: 3..65

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1258	contig	L-elsbetiae_contig1258:14027..14517 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1258.2081.1	mRNA_L-elsbetiae_contig1258.2081.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig1258 14027..14532 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig1258.2081.1 ID=prot_L-elsbetiae_contig1258.2081.1|Name=mRNA_L-elsbetiae_contig1258.2081.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=65bp
MRVVLPLLKPATFALGEIIVTPKVGIREMGFIMSGEVEVRLAKGRRNFKT
MTMGERRHFGEMFML

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014710	RmlC-like_jellyroll
IPR000595	cNMP-bd_dom
IPR018490	cNMP-bd-like