prot_L-elsbetiae_contig1255.2063.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1255.2063.1
Unique Nameprot_L-elsbetiae_contig1255.2063.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length410
Homology
BLAST of mRNA_L-elsbetiae_contig1255.2063.1 vs. uniprot
Match: D8LFW5_ECTSI (Putative ubiquitin fusion-degradation protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFW5_ECTSI)

HSP 1 Score: 305 bits (781), Expect = 4.100e-91
Identity = 154/204 (75.49%), Postives = 168/204 (82.35%), Query Frame = 0
Query:    1 MSSPYVSTRALRLTRPPPGIFCKSYQCHSMACLDREGLEFGDKIIMPQAAFQEAHRLRLKLPLLFKLVNADANTRRVIGPAGPAPCHFCGVLEFSAPEDQARAQTMLLKVFLPYWMMQSLLLVEGARVELRSILRPPAGSFVLFKPHDETFLDLAARQGPKALMEGALRRYSVLSEGATILVQHEGENFYLDVVEARTLDSSSA 204
            MS+      +LRLTRPP GI CK+YQCHSMACLDR GLE GDKIIMPQAAF EAHRLRLKLPLLFKLVN D  TRR++G  GP+P  FCGVLEFSAPEDQ         VFLPYW+MQ+LLL EG RVELRSILRPPAGSFV FKPHDE FL +AA+QGPKALME ALRRYSVLSEGATILVQHEG+NF+LDV+E RT DS+ A
Sbjct:    1 MSAAQYHGTSLRLTRPPSGILCKTYQCHSMACLDRPGLELGDKIIMPQAAFHEAHRLRLKLPLLFKLVNTDVGTRRIMGTTGPSPSQFCGVLEFSAPEDQ---------VFLPYWLMQNLLLSEGGRVELRSILRPPAGSFVRFKPHDEAFLGVAAKQGPKALMEFALRRYSVLSEGATILVQHEGDNFFLDVMELRTFDSAPA 195          
BLAST of mRNA_L-elsbetiae_contig1255.2063.1 vs. uniprot
Match: A0A6H5JNY9_9PHAE (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY9_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 5.930e-52
Identity = 150/303 (49.50%), Postives = 170/303 (56.11%), Query Frame = 0
Query:   10 ALRLTRPPPGIFCKSYQCHSMACLDREGLEFGDKIIMPQAAFQEAHRLRLKLPLLFKLVNADANTRRVIGPAGPAPCHFCGVLEFSAPEDQARAQTMLLKVFLPYWMMQSLLLVEGARVELRSILRPPAGSFVLFKPHDETFLDLAARQGPKALMEGALRRYSVLSEGATILVQHEGENFYLDVVEARTLDSSSAAGNVDNGSSS-NPPSESADAE--------GRGRHSGSDD-----VGSSDN--------RYGAANXXXXXXXXXXXXGGKGVRLVCLLGDLDLEVEFCSPHAPLPKQGA 290
            +LRLTRPP GIFCK+Y+CHSMACLDR GLEFGDKIIMPQAAF EA   R              +T+R      P    F  VL    P          ++VFLPYW+MQ+LLL EG RVELRSILRPPAGSFV FKPHDE+FL +AA+Q                         HEG+NF+LDVVE RT DSS A    D G  S +P S SA           G G  + +DD     V + D+        R+      XXXXXXXXXX     RLV LLGDLDLEVEFCSPHAPLP   A
Sbjct:   23 SLRLTRPPSGIFCKTYKCHSMACLDRPGLEFGDKIIMPQAAFHEASSRRFA-----------EDTQR------PDAVSFVIVL----PVRPRHRSYHRIQVFLPYWLMQNLLLSEGGRVELRSILRPPAGSFVRFKPHDESFLGVAAKQ-------------------------HEGDNFFLDVVELRTFDSSPATVVSDGGGDSPSPDSPSAALRPPRNGTPVGTGHENDNDDFTRNGVSNHDHHDGNGSPYRHAGRRVRXXXXXXXXXXXXXXXRLVGLLGDLDLEVEFCSPHAPLPPSPA 279          
BLAST of mRNA_L-elsbetiae_contig1255.2063.1 vs. uniprot
Match: A0A329SVD9_9STRA (TRAF-type domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SVD9_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.670e-33
Identity = 86/200 (43.00%), Postives = 114/200 (57.00%), Query Frame = 0
Query:   12 RLTRPPPGIFCKSY--QCHSMACLDREGLEFGDKIIMPQAAFQEAHRLRLKLPLLFKLVNADANTRRVIGPAGPAPCHFCGVLEFSAPEDQARAQTMLLKVFLPYWMMQSLLLVEGARVELRSILRPPAGSFVLFKPHDETFLDLAARQGPKALMEGALRRYSVLSEGATILVQHEGENFYLDVVEARTLDSSSAAGNVD 209
            R  +PP      S+  QC S+ACLD   LEFGDKI++P         +++  PLLF +V A     +  G       H+C V EFSAP+ Q         VFLPYW+MQ+L + EG  VE+ S++  P G +   +P   +FLDLAA  GPK LME ALRRYSVLS G+TIL+++    +YL VVE +     S  G+VD
Sbjct:   18 RFHKPPSKALLPSHKLQCFSVACLDMPRLEFGDKIVLPPKILLGLQYMKIAPPLLF-MVQAVGLDIQPEGILNACSRHYCSVQEFSAPDGQ---------VFLPYWLMQNLGVAEGGTVEVTSVVNLPRGVYCRLQPEAMSFLDLAAEIGPKLLMETALRRYSVLSVGSTILIEYGSVQYYLRVVELKPASVVSLCGDVD 207          
BLAST of mRNA_L-elsbetiae_contig1255.2063.1 vs. uniprot
Match: A0A067D5J6_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D5J6_SAPPC)

HSP 1 Score: 141 bits (356), Expect = 3.190e-33
Identity = 79/199 (39.70%), Postives = 115/199 (57.79%), Query Frame = 0
Query:   25 YQCHSMACL--------------DREGLEFGDKIIMPQAAFQEAHRLRLKLPLLFKLVNADANTRRVIGPAGPAPCHFCGVLEFSAPEDQARAQTMLLKVFLPYWMMQSLLLVEGARVELRSILRPPAGSFVLFKPHDETFLDLAARQGPKALMEGALRRYSVLSEGATILVQHEGENFYLDVVEARTLDSSSAAGNVD 209
            ++C+S+ACL              D   LEFGDK+I+P A  ++   L++ LPL+F++ + +A          P    FC VLEFSAP+ Q         +F PYWMMQ+LL+ EG R++L S    P G +  F+PH   FLDLAA  GPK L+E A+R+YSVLS G TI++++  + +++DVV  +  D     G+VD
Sbjct:   11 FECYSVACLGATRPIRGVLTLVVDMPDLEFGDKVILPPAVLRDLQVLKIPLPLVFRVTSTNA----------PDVRQFCSVLEFSAPDGQ---------MFAPYWMMQNLLVDEGGRLQLESATNIPRGVYCRFQPHVGAFLDLAATLGPKILLESAMRKYSVLSVGETIVIEYGADKYFVDVVHVKPGDVIHLFGDVD 190          
BLAST of mRNA_L-elsbetiae_contig1255.2063.1 vs. uniprot
Match: A0A024UHJ9_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UHJ9_9STRA)

HSP 1 Score: 141 bits (355), Expect = 6.020e-33
Identity = 80/202 (39.60%), Postives = 116/202 (57.43%), Query Frame = 0
Query:    1 MSSPYVSTRALRLTRPPPGI-----FCKSYQCHSMACLDREGLEFGDKIIMPQAAFQEAHRLRLKLPLLFKLVNADANTRRVIGPAGPAPCHFCGVLEFSAPEDQARAQTMLLKVFLPYWMMQSLLLVEGARVELRSILRPPAGSFVLFKPHDETFLDLAARQGPKALMEGALRRYSVLSEGATILVQHEGENFYLDVVEAR 197
            M+ P  +TR   +TR P        +  S+ C+S+A +D+  LEFGDK+I+P     E  RL++ LPLLFKL ++ A++           C +CGV+EFSAP  Q         ++ PYWMMQ L + EGA V L S L  P G +   +P+    LD+AA  GPK L+E A+RRYS L  G TI++++  E F+L +V+ +
Sbjct:    1 MAPPKRATRRPVVTRAPLASTQIVPYTGSFTCNSVAFIDKPDLEFGDKVILPPNVLVEIQRLKIPLPLLFKLTSSHASSSEC--------CQYCGVMEFSAPVGQ---------MYAPYWMMQQLGVDEGANVHLESALSIPRGLYCQLQPNRLEILDIAASIGPKILLESAMRRYSCLGVGGTIMIEYGDERFFLKLVQVK 185          
BLAST of mRNA_L-elsbetiae_contig1255.2063.1 vs. uniprot
Match: A0A024UI65_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UI65_9STRA)

HSP 1 Score: 141 bits (355), Expect = 6.500e-33
Identity = 80/202 (39.60%), Postives = 116/202 (57.43%), Query Frame = 0
Query:    1 MSSPYVSTRALRLTRPPPGI-----FCKSYQCHSMACLDREGLEFGDKIIMPQAAFQEAHRLRLKLPLLFKLVNADANTRRVIGPAGPAPCHFCGVLEFSAPEDQARAQTMLLKVFLPYWMMQSLLLVEGARVELRSILRPPAGSFVLFKPHDETFLDLAARQGPKALMEGALRRYSVLSEGATILVQHEGENFYLDVVEAR 197
            M+ P  +TR   +TR P        +  S+ C+S+A +D+  LEFGDK+I+P     E  RL++ LPLLFKL ++ A++           C +CGV+EFSAP  Q         ++ PYWMMQ L + EGA V L S L  P G +   +P+    LD+AA  GPK L+E A+RRYS L  G TI++++  E F+L +V+ +
Sbjct:    1 MAPPKRATRRPVVTRAPLASTQIVPYTGSFTCNSVAFIDKPDLEFGDKVILPPNVLVEIQRLKIPLPLLFKLTSSHASSSEC--------CQYCGVMEFSAPVGQ---------MYAPYWMMQQLGVDEGANVHLESALSIPRGLYCQLQPNRLEILDIAASIGPKILLESAMRRYSCLGVGGTIMIEYGDERFFLKLVQVK 185          
BLAST of mRNA_L-elsbetiae_contig1255.2063.1 vs. uniprot
Match: T0RW44_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RW44_SAPDV)

HSP 1 Score: 132 bits (333), Expect = 3.310e-30
Identity = 72/172 (41.86%), Postives = 102/172 (59.30%), Query Frame = 0
Query:   38 LEFGDKIIMPQAAFQEAHRLRLKLPLLFKLVNADANTRRVIGPAGPAPCHFCGVLEFSAPEDQARAQTMLLKVFLPYWMMQSLLLVEGARVELRSILRPPAGSFVLFKPHDETFLDLAARQGPKALMEGALRRYSVLSEGATILVQHEGENFYLDVVEARTLDSSSAAGNVD 209
            LEFGDK+I+P A  ++   L++ LPL+F++ +  A   R           FC VLEFSAP+ Q         +F PYWMMQ+LL  EG R++L S    P G +   +PH   FLDLAA  GPK L+E A+R+YSVLS G TI++++  + +++DVV  +  D     G+VD
Sbjct:    4 LEFGDKVILPSAVLRDLQLLKIPLPLVFQVTSTTAPNVR----------QFCSVLEFSAPDGQ---------MFAPYWMMQNLLCDEGGRLQLESATNIPRGVYCRLQPHVSAFLDLAATLGPKILLESAMRKYSVLSVGETIVIEYGADKYFVDVVHVKPGDVIHLFGDVD 156          
BLAST of mRNA_L-elsbetiae_contig1255.2063.1 vs. uniprot
Match: A0A812TUZ3_9DINO (Ufd1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812TUZ3_9DINO)

HSP 1 Score: 128 bits (321), Expect = 2.580e-29
Identity = 79/183 (43.17%), Postives = 106/183 (57.92%), Query Frame = 0
Query:   19 GIFCKSYQCHSMACLDREGLEFGDKIIMPQAAFQEAHRLRLKLPLLFKLVNADANTR-RVIGPAGP--APC-HFCGVLEFSAPEDQARAQTMLLKVFLPYWMMQSLLLVEGARVELRSILRPPAGSFVLFKPHDETFLDLAARQGPKALMEGALRRYSVLSEGATILVQHEGENFYLDVVEAR 197
            G F  S++  S+       LE GDK+I+P AAF+E  RL+L  P++F++ N    +  RV    G   AP   FCGV EFSA + +A         FLP WMMQ+L + +G R    S+   P G+FV F+PH   F+DLAA  GP+ LME A++ YS LS G T++VQ  G  F LDV+E R
Sbjct:   14 GKFEGSFEVRSLKAGGFPQLEAGDKVILPAAAFKEISRLKLPFPMIFRVENERRRSAGRVANRRGATKAPVKQFCGVQEFSAEKGKA---------FLPRWMMQNLKIRDGGRAVFTSVRGMPKGTFVRFQPHTTEFIDLAAALGPRELMEHAMKTYSALSLGETLVVQCSGSMFKLDVLEVR 187          
BLAST of mRNA_L-elsbetiae_contig1255.2063.1 vs. uniprot
Match: V9E2N2_PHYPR (TRAF-type domain-containing protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=V9E2N2_PHYPR)

HSP 1 Score: 128 bits (321), Expect = 1.120e-28
Identity = 75/184 (40.76%), Postives = 107/184 (58.15%), Query Frame = 0
Query:   26 QCHSMACLDREGLEFGDKIIMPQAAFQEAHRLRLKLPLLFKLVNADANTRRVIGPAGPAPCHFCGVLEFSAPEDQARAQTMLLKVFLPYWMMQSLLLVEGARVELRSILRPPAGSFVLFKPHDETFLDLAARQGPKALMEGALRRYSVLSEGATILVQHEGENFYLDVVEARTLDSSSAAGNVD 209
            QC S+ACLD   LEFGDKI++P     +   L++  PL+F +V A     +  G    +   +C V EFS+P+ Q         VF+PYW+MQ+L + EG  V + S++  P G +   +P   +FLDLAA  GPK LME ALRRYSVLS G+TI++++    + + VVE +     S  G+VD
Sbjct:   34 QCFSVACLDMPHLEFGDKIVLPPKILVDLQCLKIPTPLIF-MVRAAGQDNQPEGDLAISS-QYCSVQEFSSPDGQ---------VFVPYWLMQNLGVREGGSVVVTSVVNLPRGVYCRLQPETTSFLDLAAEIGPKLLMETALRRYSVLSTGSTIVIEYGSVRYNVRVVELKPAPVVSLCGDVD 206          
BLAST of mRNA_L-elsbetiae_contig1255.2063.1 vs. uniprot
Match: A0A6A3Q682_9STRA (C2H2-type domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3Q682_9STRA)

HSP 1 Score: 126 bits (317), Expect = 7.560e-28
Identity = 73/184 (39.67%), Postives = 101/184 (54.89%), Query Frame = 0
Query:   26 QCHSMACLDREGLEFGDKIIMPQAAFQEAHRLRLKLPLLFKLVNADANTRRVIGPAGPAPCHFCGVLEFSAPEDQARAQTMLLKVFLPYWMMQSLLLVEGARVELRSILRPPAGSFVLFKPHDETFLDLAARQGPKALMEGALRRYSVLSEGATILVQHEGENFYLDVVEARTLDSSSAAGNVD 209
            QC S+ACLD   LEFGDK+++P     E     +  P LFK+     ++    G   P    +C V EFSAPE Q         VFLPYW+MQ+L + EG  V + S+   P G +   +P   +FLDLAA+ GPK LME A RRYSVLS  + I++++    +Y+ + E +     S  G+VD
Sbjct:   27 QCFSVACLDMPHLEFGDKVVLPPKILLELKCSNISTPFLFKVRAGGVDSTEGNGIYRP---QYCSVQEFSAPEGQ---------VFLPYWLMQNLHVPEGGSVVVSSVTDLPRGIYCRLQPETTSFLDLAAKIGPKLLMETAFRRYSVLSMNSIIVIEYGNVRYYVRIAELKPASVVSLCGDVD 198          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1255.2063.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFW5_ECTSI4.100e-9175.49Putative ubiquitin fusion-degradation protein n=1 ... [more]
A0A6H5JNY9_9PHAE5.930e-5249.50RanBP2-type domain-containing protein n=1 Tax=Ecto... [more]
A0A329SVD9_9STRA1.670e-3343.00TRAF-type domain-containing protein n=1 Tax=Phytop... [more]
A0A067D5J6_SAPPC3.190e-3339.70Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A024UHJ9_9STRA6.020e-3339.60Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A024UI65_9STRA6.500e-3339.60Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
T0RW44_SAPDV3.310e-3041.86Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A812TUZ3_9DINO2.580e-2943.17Ufd1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
V9E2N2_PHYPR1.120e-2840.76TRAF-type domain-containing protein n=8 Tax=Phytop... [more]
A0A6A3Q682_9STRA7.560e-2839.67C2H2-type domain-containing protein n=3 Tax=Phytop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042299Ufd1-like, Nn domainGENE3D2.40.40.50coord: 11..134
e-value: 8.5E-25
score: 88.4
NoneNo IPR availableGENE3D3.10.330.10coord: 138..209
e-value: 4.6E-12
score: 47.7
IPR004854Ubiquitin fusion degradation protein Ufd1-likePFAMPF03152UFD1coord: 21..198
e-value: 1.6E-31
score: 109.1
IPR004854Ubiquitin fusion degradation protein Ufd1-likePANTHERPTHR12555UBIQUITIN FUSION DEGRADATON PROTEIN 1coord: 20..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1255contigL-elsbetiae_contig1255:564..3279 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1255.2063.1mRNA_L-elsbetiae_contig1255.2063.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1255 564..3285 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1255.2063.1 ID=prot_L-elsbetiae_contig1255.2063.1|Name=mRNA_L-elsbetiae_contig1255.2063.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=410bp
MSSPYVSTRALRLTRPPPGIFCKSYQCHSMACLDREGLEFGDKIIMPQAA
FQEAHRLRLKLPLLFKLVNADANTRRVIGPAGPAPCHFCGVLEFSAPEDQ
ARAQTMLLKVFLPYWMMQSLLLVEGARVELRSILRPPAGSFVLFKPHDET
FLDLAARQGPKALMEGALRRYSVLSEGATILVQHEGENFYLDVVEARTLD
SSSAAGNVDNGSSSNPPSESADAEGRGRHSGSDDVGSSDNRYGAANNAGG
GGGGGGAAGGKGVRLVCLLGDLDLEVEFCSPHAPLPKQGAAEHPSECRRA
ERRRDGLPGHPVDDRDRNPNRQGSRGPMDEISPSPSPPQSSPCTIAGLQA
SPPPSSVFDGAAGPGGGRPEPRGQEEPRWTLPAPARAKRSCDGGASASGL
GPETPRWRMG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042299Ufd1-like_Nn
IPR004854Ufd1-like