prot_L-elsbetiae_contig1253.2050.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1253.2050.1
Unique Nameprot_L-elsbetiae_contig1253.2050.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length83
Homology
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BLAST of mRNA_L-elsbetiae_contig1253.2050.1 vs. uniprot
Match: A0A6H5JH57_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH57_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 2.630e-7
Identity = 44/92 (47.83%), Postives = 49/92 (53.26%), Query Frame = 0 
Query:    1 MEEDYRLALAMQKGEAGAAAGDG-RGF------SAEPRFQRGLGQRLRLLRRFRVCRPITGNNSSGDGGGRGG---WRASSGSKGSQEDDHE 82
            MEEDYRLALAMQKGEA AA G G RG        A P    G     R+L          GN   G+ GG GG   WR SSGSKG ++D+ E
Sbjct:   42 MEEDYRLALAMQKGEAAAANGTGGRGVPVAAPVQAPPASSAGSSSFSRML----------GNERDGNSGGAGGGGIWRRSSGSKGDKDDEWE 123
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1253.2050.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JH57_9PHAE2.630e-747.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1253contigL-elsbetiae_contig1253:22928..23827 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1253.2050.1mRNA_L-elsbetiae_contig1253.2050.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1253 22057..23890 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1253.2050.1 ID=prot_L-elsbetiae_contig1253.2050.1|Name=mRNA_L-elsbetiae_contig1253.2050.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=83bp
MEEDYRLALAMQKGEAGAAAGDGRGFSAEPRFQRGLGQRLRLLRRFRVCR
PITGNNSSGDGGGRGGWRASSGSKGSQEDDHE*
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