prot_L-elsbetiae_contig1253.2047.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1253.2047.1
Unique Nameprot_L-elsbetiae_contig1253.2047.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length215
Homology
BLAST of mRNA_L-elsbetiae_contig1253.2047.1 vs. uniprot
Match: D7G244_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G244_ECTSI)

HSP 1 Score: 306 bits (783), Expect = 2.300e-103
Identity = 162/217 (74.65%), Postives = 177/217 (81.57%), Query Frame = 0
Query:    1 MMQGARSIVAQLARKPAAIGAAFEKRSVARC--GSECCRRHFSXXXXXXGIATEWQGERQPGSGGDELQRGLSPEEVLRVGARTQEMWKDHVALTTEFPDASLPPGGDD-SVVSPDAVRRKRLVYRSKQRGWLEANLLLGTWAEKNVAGLSGSEMDSYEDILNLETVDIFNFIAGNAEPPAFVDTPMMARLQAYVKSNPLGQSPASYASAKRESNLT 214
            M+ G +++VAQ AR P A           RC  G E   R +       G A +W+GERQPGSGGDELQR L+PEEVLRVGARTQEMWKDHVALTTEFPDASLPPGG + S VSPDAVRRKRLVYRSKQRGWLE +LLLGTWAE+NVAGLS ++MDSYEDILNLETVDIFNFI GNA+PPAFVD PM+ARLQAYVKSNPLGQSPASYASAKRESNLT
Sbjct:    2 MIAGMKAVVAQAARIPVA---------TIRCCGGGEGAVRCYRRLSTAAGGAKDWEGERQPGSGGDELQRELTPEEVLRVGARTQEMWKDHVALTTEFPDASLPPGGHEASSVSPDAVRRKRLVYRSKQRGWLEVDLLLGTWAERNVAGLSAADMDSYEDILNLETVDIFNFITGNADPPAFVDAPMLARLQAYVKSNPLGQSPASYASAKRESNLT 209          
BLAST of mRNA_L-elsbetiae_contig1253.2047.1 vs. uniprot
Match: A0A835YN51_9STRA (Flavinator of succinate dehydrogenase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN51_9STRA)

HSP 1 Score: 173 bits (439), Expect = 2.840e-51
Identity = 86/151 (56.95%), Postives = 112/151 (74.17%), Query Frame = 0
Query:   64 DELQRGLSPEEVLRVGARTQEMWKDHVALTTEFPDASLPPGGDDSVVSPDAVRRKRLVYRSKQRGWLEANLLLGTWAEKNVAGLSGSEMDSYEDILNLETVDIFNFIAGNAEPPAFVDTPMMARLQAYVKSNPLGQSPASYASAKRESNLT 214
            D +   L+ E+V RVG R+QE + +H+ L T+FP+AS PP G    VS D VRRKRL+YRSKQRGWLE +LLLGTWAE NV GL+ +EMD YE ILN ETVDIFN+++G    PA ++TPMMARL+ Y  S P+G +P+ YA+ K+++ LT
Sbjct:   52 DVMYENLTEEQVRRVGERSQEEFFNHIVLKTKFPEASFPPEGG---VSRDMVRRKRLIYRSKQRGWLEVDLLLGTWAEANVMGLTAAEMDEYEAILNCETVDIFNYVSGVQAVPARLETPMMARLREYALSAPIGSTPSEYAAVKQKNRLT 199          
BLAST of mRNA_L-elsbetiae_contig1253.2047.1 vs. uniprot
Match: A0A7S2R8F6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R8F6_9STRA)

HSP 1 Score: 147 bits (370), Expect = 1.970e-41
Identity = 71/146 (48.63%), Postives = 98/146 (67.12%), Query Frame = 0
Query:   69 GLSPEEVLRVGARTQEMWKDHVALTTEFPDASLPPGGDDSVVSPDAVRRKRLVYRSKQRGWLEANLLLGTWAEKNVAGLSGSEMDSYEDILNLETVDIFNFIAGNAEPPAFVDTPMMARLQAYVKSNPLGQSPASYASAKRESNLT 214
            GL      R  AR  +M  +H AL T+ P +SL PG  ++ V  D +RRKRL+YRSKQRGWLE +LL+GTWA ++V  LS  E+D YE +LN ET+DIFN + G   PP  V++P++ ++QA+  ++P+G SP SYAS K  + LT
Sbjct:   12 GLEQSLARRAAARDHQMRSEHFALKTDVPVSSLAPG--ETRVDGDTIRRKRLIYRSKQRGWLEVDLLMGTWAVEHVPSLSSEELDQYEALLNRETIDIFNIVTGKDVPPPEVESPLLKKIQAWANTSPIGTSPESYASVKGSAGLT 155          
BLAST of mRNA_L-elsbetiae_contig1253.2047.1 vs. uniprot
Match: A0A067CE16_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067CE16_SAPPC)

HSP 1 Score: 140 bits (354), Expect = 9.830e-39
Identity = 67/131 (51.15%), Postives = 89/131 (67.94%), Query Frame = 0
Query:   70 LSPEEVLRVGARTQEMWKDHVALTTEFPDASLPPGGDDSVVSPDAVRRKRLVYRSKQRGWLEANLLLGTWAEKNVAGLSGSEMDSYEDILNLETVDIFNFIAGNAEPPAFVDTPMMARLQAYVKSNPLGQS 200
            ++  + LR   R ++M KDH A+  E+PDAS      +  +  D   RKR++YRSKQRGWLE +LLLG WA +NV  L+  E+  YEDILN ET+DIFNFI+G    P  +DTPMM RLQAY K++PLG++
Sbjct:   37 ITEAQELRAQVRNEQMRKDHFAIKAEYPDASQ----GEEAIDADKANRKRVIYRSKQRGWLEVDLLLGRWASENVMSLTADELRQYEDILNRETIDIFNFISGKDAVPPEIDTPMMKRLQAYCKTSPLGKA 163          
BLAST of mRNA_L-elsbetiae_contig1253.2047.1 vs. uniprot
Match: A0A4D9CR24_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR24_9STRA)

HSP 1 Score: 139 bits (351), Expect = 4.690e-38
Identity = 71/146 (48.63%), Postives = 96/146 (65.75%), Query Frame = 0
Query:   70 LSPEEVLRVGARTQEMWKDHVALTTEFPDASLPPGGDDSVVSPDAVRRKRLVYRSKQRGWLEANLLLGTWAEKNVAGLSGSEMDSYEDILNLETVDIFNFIAGN-AEPPAFVDTPMMARLQAYVKSNPLGQ-SPASYASAKRESNL 213
            L+P +V R+G RT+    DH+ L T+ P++SL P      V  D +RRKRL+YRSKQRGWLE +LLLG+WA +NV  LS  E+D YE ILN+ET+DIFN + G  A PPA   + +++RLQ Y  S+P G  S  +Y + K  + L
Sbjct:   49 LTPAQVRRIGERTKAQLDDHLRLKTQVPESSLDPTAPPGPVDTDLIRRKRLLYRSKQRGWLEVDLLLGSWAAENVMSLSVPELDEYEKILNMETIDIFNLVNGALAPPPALKGSKILSRLQEYANSSPFGNASTRTYEAVKDRTGL 194          
BLAST of mRNA_L-elsbetiae_contig1253.2047.1 vs. uniprot
Match: A0A1V9ZJH1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJH1_9STRA)

HSP 1 Score: 138 bits (348), Expect = 7.200e-38
Identity = 69/131 (52.67%), Postives = 91/131 (69.47%), Query Frame = 0
Query:   70 LSPEEVLRVGARTQEMWKDHVALTTEFPDASLPPGGDDSVVSPDAVRRKRLVYRSKQRGWLEANLLLGTWAEKNVAGLSGSEMDSYEDILNLETVDIFNFIAGNAEPPAFVDTPMMARLQAYVKSNPLGQS 200
            ++  + +R   R  +M K+H A+  EFPDAS    GD S+ + D   RKR++YRSKQRGWLE +LLLG WA +NV  L+  E+  YEDILN ET+DIFNFI+G    P  +DTPMM RLQAY K++PLG++
Sbjct:   34 ITEAQEMRAQERNAQMRKEHFAMKAEFPDASQ---GDVSIDA-DMANRKRVIYRSKQRGWLEVDLLLGRWASENVMSLTKEELSQYEDILNRETIDIFNFISGKDTVPPEIDTPMMKRLQAYCKTSPLGKA 160          
BLAST of mRNA_L-elsbetiae_contig1253.2047.1 vs. uniprot
Match: A0A1V9YDJ8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YDJ8_9STRA)

HSP 1 Score: 137 bits (344), Expect = 9.850e-38
Identity = 68/125 (54.40%), Postives = 85/125 (68.00%), Query Frame = 0
Query:   76 LRVGARTQEMWKDHVALTTEFPDASLPPGGDDSVVSPDAVRRKRLVYRSKQRGWLEANLLLGTWAEKNVAGLSGSEMDSYEDILNLETVDIFNFIAGNAEPPAFVDTPMMARLQAYVKSNPLGQS 200
            LR   R  +M K+H A+ TEFP+AS      D V+      RKR++YRSKQRGWLE +LLLG WA +NV  LS  E+  YEDILN ET+DIFNFI+G    P  +DTPMM RLQ Y K++PLG++
Sbjct:    4 LRAQQRNDQMRKEHFAVKTEFPEASQ----GDVVIDAVVANRKRVIYRSKQRGWLEVDLLLGRWASENVMSLSNEELRQYEDILNRETIDIFNFISGKDTVPPEIDTPMMKRLQDYCKTSPLGKA 124          
BLAST of mRNA_L-elsbetiae_contig1253.2047.1 vs. uniprot
Match: A0A7S4EEB6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EEB6_9STRA)

HSP 1 Score: 135 bits (339), Expect = 5.340e-36
Identity = 73/146 (50.00%), Postives = 90/146 (61.64%), Query Frame = 0
Query:   69 GLSPEEVLRVGARTQEMWKDHVALTTEFPDASLPPGGDDSVVSPDAVRRKRLVYRSKQRGWLEANLLLGTWAEKNVAGLSGSEMDSYEDILNLETVDIFNFIAGNAEPPAFVDTPMMARLQAYVKSNPLGQSPASYASAKRESNLT 214
            GLS E   R   R  E+  +H  +  +                 DAVRRKRL+YRSKQRGWLE +LLLG+WA +NVA LS  + D+YE ILN ET+DIFNFI G    P  +DTP+M RLQ Y  S PLG  P +YA+AK ++NLT
Sbjct:   88 GLSDELEQRASRRWAELATEHRKIPAD-----------------DAVRRKRLIYRSKQRGWLEVDLLLGSWAAENVATLSKEDCDAYEHILNCETIDIFNFITGKDPVPPRLDTPVMKRLQDYCASAPLGTDPGAYAAAKADANLT 216          
BLAST of mRNA_L-elsbetiae_contig1253.2047.1 vs. uniprot
Match: A0A2P4XKW9_9STRA (Succinate dehydrogenase subunit Emi5 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XKW9_9STRA)

HSP 1 Score: 129 bits (323), Expect = 4.910e-34
Identity = 66/133 (49.62%), Postives = 89/133 (66.92%), Query Frame = 0
Query:   68 RGLSPEEVLRVGARTQEMWKDHVALTTEFPDASLPPGGDDSVVSPDAVRRKRLVYRSKQRGWLEANLLLGTWAEKNVAGLSGSEMDSYEDILNLETVDIFNFIAGNAEPPAFVDTPMMARLQAYVKSNPLGQS 200
            + +S E+  +   R+  +  DH+A   +FP AS    G+  V S D   RKR++YRSKQRGWLE +LLLG WA +NV  LS  E+  YEDILN ET+DIFN+I+G ++ P  +DTPMM RLQ Y  S+PLG++
Sbjct:   38 KSISSEQAKKALERSASIRADHIATKGDFPSASH---GEHQVDS-DEANRKRIIYRSKQRGWLEVDLLLGRWASQNVMQLSKDELKQYEDILNEETIDIFNYISGKSDVPEQLDTPMMKRLQEYCLSSPLGKA 166          
BLAST of mRNA_L-elsbetiae_contig1253.2047.1 vs. uniprot
Match: A0A6G0XII7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XII7_9STRA)

HSP 1 Score: 127 bits (320), Expect = 9.820e-34
Identity = 61/120 (50.83%), Postives = 82/120 (68.33%), Query Frame = 0
Query:   81 RTQEMWKDHVALTTEFPDASLPPGGDDSVVSPDAVRRKRLVYRSKQRGWLEANLLLGTWAEKNVAGLSGSEMDSYEDILNLETVDIFNFIAGNAEPPAFVDTPMMARLQAYVKSNPLGQS 200
            R +EM K H  +  EFP +S      D  +  DA  RKR++YRSKQRGWLE +LLLG WA +NV  L+  E+  YED+LNLET+DIFN I+G    P  ++TP+M R+QA+ +SNPLG++
Sbjct:   39 RYEEMRKQHFGVRQEFPASSQ----GDVAIDADAANRKRIIYRSKQRGWLEVDLLLGRWASENVMSLTPDELKQYEDVLNLETIDIFNLISGKDSVPEKLNTPVMKRIQAFCRSNPLGKA 154          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1253.2047.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G244_ECTSI2.300e-10374.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YN51_9STRA2.840e-5156.95Flavinator of succinate dehydrogenase-domain-conta... [more]
A0A7S2R8F6_9STRA1.970e-4148.63Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A067CE16_SAPPC9.830e-3951.15Uncharacterized protein n=3 Tax=Saprolegnia TaxID=... [more]
A0A4D9CR24_9STRA4.690e-3848.63Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A1V9ZJH1_9STRA7.200e-3852.67Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A1V9YDJ8_9STRA9.850e-3854.40Uncharacterized protein (Fragment) n=1 Tax=Thraust... [more]
A0A7S4EEB6_9STRA5.340e-3650.00Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A2P4XKW9_9STRA4.910e-3449.62Succinate dehydrogenase subunit Emi5 n=1 Tax=Phyto... [more]
A0A6G0XII7_9STRA9.820e-3450.83Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036714Flavinator of succinate dehydrogenase superfamilyGENE3D1.10.150.250coord: 112..197
e-value: 3.2E-21
score: 77.0
IPR036714Flavinator of succinate dehydrogenase superfamilySUPERFAMILY109910YgfY-likecoord: 114..190
IPR005631Flavinator of succinate dehydrogenasePFAMPF03937Sdh5coord: 117..188
e-value: 4.9E-19
score: 68.1
NoneNo IPR availablePANTHERPTHR12469:SF2SUCCINATE DEHYDROGENASE ASSEMBLY FACTOR 2, MITOCHONDRIALcoord: 109..200
NoneNo IPR availablePANTHERPTHR12469PROTEIN EMI5 HOMOLOG, MITOCHONDRIALcoord: 109..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1253contigL-elsbetiae_contig1253:6828..11317 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1253.2047.1mRNA_L-elsbetiae_contig1253.2047.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1253 6773..11317 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1253.2047.1 ID=prot_L-elsbetiae_contig1253.2047.1|Name=mRNA_L-elsbetiae_contig1253.2047.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=215bp
MMQGARSIVAQLARKPAAIGAAFEKRSVARCGSECCRRHFSSSSGGGGIA
TEWQGERQPGSGGDELQRGLSPEEVLRVGARTQEMWKDHVALTTEFPDAS
LPPGGDDSVVSPDAVRRKRLVYRSKQRGWLEANLLLGTWAEKNVAGLSGS
EMDSYEDILNLETVDIFNFIAGNAEPPAFVDTPMMARLQAYVKSNPLGQS
PASYASAKRESNLT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036714SDH_sf
IPR005631SDH