mRNA_L-elsbetiae_contig1253.2047.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1253.2047.1
Unique NamemRNA_L-elsbetiae_contig1253.2047.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1253.2047.1 vs. uniprot
Match: D7G244_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G244_ECTSI)

HSP 1 Score: 306 bits (783), Expect = 4.640e-103
Identity = 162/218 (74.31%), Postives = 178/218 (81.65%), Query Frame = 2 
Query:   53 IMMQGARSIVAQLARKPAAIGAAFEKRSVARC--GSECCRRHFSXXXXXXGIATEWQGERQPGSGGDELQRGLSPEEVLRVGARTQEMWKDHVALTTEFPDASLPPGGDD-SVVSPDAVRRKRLVYRSKQRGWLEANLLLGTWAEKNVAGLSGSEMDSYEDILNLETVDIFNFIAGNAEPPAFVDTPMMARLQAYVKSNPLGQSPASYASAKRESNLT 697
            +M+ G +++VAQ AR P A           RC  G E   R +       G A +W+GERQPGSGGDELQR L+PEEVLRVGARTQEMWKDHVALTTEFPDASLPPGG + S VSPDAVRRKRLVYRSKQRGWLE +LLLGTWAE+NVAGLS ++MDSYEDILNLETVDIFNFI GNA+PPAFVD PM+ARLQAYVKSNPLGQSPASYASAKRESNLT
Sbjct:    1 MMIAGMKAVVAQAARIPVA---------TIRCCGGGEGAVRCYRRLSTAAGGAKDWEGERQPGSGGDELQRELTPEEVLRVGARTQEMWKDHVALTTEFPDASLPPGGHEASSVSPDAVRRKRLVYRSKQRGWLEVDLLLGTWAERNVAGLSAADMDSYEDILNLETVDIFNFITGNADPPAFVDAPMLARLQAYVKSNPLGQSPASYASAKRESNLT 209
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BLAST of mRNA_L-elsbetiae_contig1253.2047.1 vs. uniprot
Match: A0A835YN51_9STRA (Flavinator of succinate dehydrogenase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN51_9STRA)

HSP 1 Score: 173 bits (439), Expect = 5.280e-51
Identity = 86/151 (56.95%), Postives = 112/151 (74.17%), Query Frame = 2 
Query:  245 DELQRGLSPEEVLRVGARTQEMWKDHVALTTEFPDASLPPGGDDSVVSPDAVRRKRLVYRSKQRGWLEANLLLGTWAEKNVAGLSGSEMDSYEDILNLETVDIFNFIAGNAEPPAFVDTPMMARLQAYVKSNPLGQSPASYASAKRESNLT 697
            D +   L+ E+V RVG R+QE + +H+ L T+FP+AS PP G    VS D VRRKRL+YRSKQRGWLE +LLLGTWAE NV GL+ +EMD YE ILN ETVDIFN+++G    PA ++TPMMARL+ Y  S P+G +P+ YA+ K+++ LT
Sbjct:   52 DVMYENLTEEQVRRVGERSQEEFFNHIVLKTKFPEASFPPEGG---VSRDMVRRKRLIYRSKQRGWLEVDLLLGTWAEANVMGLTAAEMDEYEAILNCETVDIFNYVSGVQAVPARLETPMMARLREYALSAPIGSTPSEYAAVKQKNRLT 199
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BLAST of mRNA_L-elsbetiae_contig1253.2047.1 vs. uniprot
Match: A0A7S2R8F6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R8F6_9STRA)

HSP 1 Score: 147 bits (370), Expect = 3.530e-41
Identity = 71/146 (48.63%), Postives = 98/146 (67.12%), Query Frame = 2 
Query:  260 GLSPEEVLRVGARTQEMWKDHVALTTEFPDASLPPGGDDSVVSPDAVRRKRLVYRSKQRGWLEANLLLGTWAEKNVAGLSGSEMDSYEDILNLETVDIFNFIAGNAEPPAFVDTPMMARLQAYVKSNPLGQSPASYASAKRESNLT 697
            GL      R  AR  +M  +H AL T+ P +SL PG  ++ V  D +RRKRL+YRSKQRGWLE +LL+GTWA ++V  LS  E+D YE +LN ET+DIFN + G   PP  V++P++ ++QA+  ++P+G SP SYAS K  + LT
Sbjct:   12 GLEQSLARRAAARDHQMRSEHFALKTDVPVSSLAPG--ETRVDGDTIRRKRLIYRSKQRGWLEVDLLMGTWAVEHVPSLSSEELDQYEALLNRETIDIFNIVTGKDVPPPEVESPLLKKIQAWANTSPIGTSPESYASVKGSAGLT 155
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BLAST of mRNA_L-elsbetiae_contig1253.2047.1 vs. uniprot
Match: A0A067CE16_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067CE16_SAPPC)

HSP 1 Score: 140 bits (354), Expect = 1.750e-38
Identity = 67/131 (51.15%), Postives = 89/131 (67.94%), Query Frame = 2 
Query:  263 LSPEEVLRVGARTQEMWKDHVALTTEFPDASLPPGGDDSVVSPDAVRRKRLVYRSKQRGWLEANLLLGTWAEKNVAGLSGSEMDSYEDILNLETVDIFNFIAGNAEPPAFVDTPMMARLQAYVKSNPLGQS 655
            ++  + LR   R ++M KDH A+  E+PDAS      +  +  D   RKR++YRSKQRGWLE +LLLG WA +NV  L+  E+  YEDILN ET+DIFNFI+G    P  +DTPMM RLQAY K++PLG++
Sbjct:   37 ITEAQELRAQVRNEQMRKDHFAIKAEYPDASQ----GEEAIDADKANRKRVIYRSKQRGWLEVDLLLGRWASENVMSLTADELRQYEDILNRETIDIFNFISGKDAVPPEIDTPMMKRLQAYCKTSPLGKA 163
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BLAST of mRNA_L-elsbetiae_contig1253.2047.1 vs. uniprot
Match: A0A4D9CR24_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR24_9STRA)

HSP 1 Score: 139 bits (351), Expect = 8.320e-38
Identity = 71/146 (48.63%), Postives = 96/146 (65.75%), Query Frame = 2 
Query:  263 LSPEEVLRVGARTQEMWKDHVALTTEFPDASLPPGGDDSVVSPDAVRRKRLVYRSKQRGWLEANLLLGTWAEKNVAGLSGSEMDSYEDILNLETVDIFNFIAGN-AEPPAFVDTPMMARLQAYVKSNPLGQ-SPASYASAKRESNL 694
            L+P +V R+G RT+    DH+ L T+ P++SL P      V  D +RRKRL+YRSKQRGWLE +LLLG+WA +NV  LS  E+D YE ILN+ET+DIFN + G  A PPA   + +++RLQ Y  S+P G  S  +Y + K  + L
Sbjct:   49 LTPAQVRRIGERTKAQLDDHLRLKTQVPESSLDPTAPPGPVDTDLIRRKRLLYRSKQRGWLEVDLLLGSWAAENVMSLSVPELDEYEKILNMETIDIFNLVNGALAPPPALKGSKILSRLQEYANSSPFGNASTRTYEAVKDRTGL 194
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BLAST of mRNA_L-elsbetiae_contig1253.2047.1 vs. uniprot
Match: A0A1V9ZJH1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJH1_9STRA)

HSP 1 Score: 138 bits (348), Expect = 1.280e-37
Identity = 69/131 (52.67%), Postives = 91/131 (69.47%), Query Frame = 2 
Query:  263 LSPEEVLRVGARTQEMWKDHVALTTEFPDASLPPGGDDSVVSPDAVRRKRLVYRSKQRGWLEANLLLGTWAEKNVAGLSGSEMDSYEDILNLETVDIFNFIAGNAEPPAFVDTPMMARLQAYVKSNPLGQS 655
            ++  + +R   R  +M K+H A+  EFPDAS    GD S+ + D   RKR++YRSKQRGWLE +LLLG WA +NV  L+  E+  YEDILN ET+DIFNFI+G    P  +DTPMM RLQAY K++PLG++
Sbjct:   34 ITEAQEMRAQERNAQMRKEHFAMKAEFPDASQ---GDVSIDA-DMANRKRVIYRSKQRGWLEVDLLLGRWASENVMSLTKEELSQYEDILNRETIDIFNFISGKDTVPPEIDTPMMKRLQAYCKTSPLGKA 160
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BLAST of mRNA_L-elsbetiae_contig1253.2047.1 vs. uniprot
Match: A0A1V9YDJ8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YDJ8_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.740e-37
Identity = 68/125 (54.40%), Postives = 85/125 (68.00%), Query Frame = 2 
Query:  281 LRVGARTQEMWKDHVALTTEFPDASLPPGGDDSVVSPDAVRRKRLVYRSKQRGWLEANLLLGTWAEKNVAGLSGSEMDSYEDILNLETVDIFNFIAGNAEPPAFVDTPMMARLQAYVKSNPLGQS 655
            LR   R  +M K+H A+ TEFP+AS      D V+      RKR++YRSKQRGWLE +LLLG WA +NV  LS  E+  YEDILN ET+DIFNFI+G    P  +DTPMM RLQ Y K++PLG++
Sbjct:    4 LRAQQRNDQMRKEHFAVKTEFPEASQ----GDVVIDAVVANRKRVIYRSKQRGWLEVDLLLGRWASENVMSLSNEELRQYEDILNRETIDIFNFISGKDTVPPEIDTPMMKRLQDYCKTSPLGKA 124
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BLAST of mRNA_L-elsbetiae_contig1253.2047.1 vs. uniprot
Match: A0A7S4EEB6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EEB6_9STRA)

HSP 1 Score: 135 bits (339), Expect = 9.390e-36
Identity = 73/146 (50.00%), Postives = 90/146 (61.64%), Query Frame = 2 
Query:  260 GLSPEEVLRVGARTQEMWKDHVALTTEFPDASLPPGGDDSVVSPDAVRRKRLVYRSKQRGWLEANLLLGTWAEKNVAGLSGSEMDSYEDILNLETVDIFNFIAGNAEPPAFVDTPMMARLQAYVKSNPLGQSPASYASAKRESNLT 697
            GLS E   R   R  E+  +H  +  +                 DAVRRKRL+YRSKQRGWLE +LLLG+WA +NVA LS  + D+YE ILN ET+DIFNFI G    P  +DTP+M RLQ Y  S PLG  P +YA+AK ++NLT
Sbjct:   88 GLSDELEQRASRRWAELATEHRKIPAD-----------------DAVRRKRLIYRSKQRGWLEVDLLLGSWAAENVATLSKEDCDAYEHILNCETIDIFNFITGKDPVPPRLDTPVMKRLQDYCASAPLGTDPGAYAAAKADANLT 216
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BLAST of mRNA_L-elsbetiae_contig1253.2047.1 vs. uniprot
Match: A0A2P4XKW9_9STRA (Succinate dehydrogenase subunit Emi5 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XKW9_9STRA)

HSP 1 Score: 129 bits (323), Expect = 8.530e-34
Identity = 66/133 (49.62%), Postives = 89/133 (66.92%), Query Frame = 2 
Query:  257 RGLSPEEVLRVGARTQEMWKDHVALTTEFPDASLPPGGDDSVVSPDAVRRKRLVYRSKQRGWLEANLLLGTWAEKNVAGLSGSEMDSYEDILNLETVDIFNFIAGNAEPPAFVDTPMMARLQAYVKSNPLGQS 655
            + +S E+  +   R+  +  DH+A   +FP AS    G+  V S D   RKR++YRSKQRGWLE +LLLG WA +NV  LS  E+  YEDILN ET+DIFN+I+G ++ P  +DTPMM RLQ Y  S+PLG++
Sbjct:   38 KSISSEQAKKALERSASIRADHIATKGDFPSASH---GEHQVDS-DEANRKRIIYRSKQRGWLEVDLLLGRWASQNVMQLSKDELKQYEDILNEETIDIFNYISGKSDVPEQLDTPMMKRLQEYCLSSPLGKA 166
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BLAST of mRNA_L-elsbetiae_contig1253.2047.1 vs. uniprot
Match: A0A6G0XII7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XII7_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.700e-33
Identity = 61/120 (50.83%), Postives = 82/120 (68.33%), Query Frame = 2 
Query:  296 RTQEMWKDHVALTTEFPDASLPPGGDDSVVSPDAVRRKRLVYRSKQRGWLEANLLLGTWAEKNVAGLSGSEMDSYEDILNLETVDIFNFIAGNAEPPAFVDTPMMARLQAYVKSNPLGQS 655
            R +EM K H  +  EFP +S      D  +  DA  RKR++YRSKQRGWLE +LLLG WA +NV  L+  E+  YED+LNLET+DIFN I+G    P  ++TP+M R+QA+ +SNPLG++
Sbjct:   39 RYEEMRKQHFGVRQEFPASSQ----GDVAIDADAANRKRIIYRSKQRGWLEVDLLLGRWASENVMSLTPDELKQYEDVLNLETIDIFNLISGKDSVPEKLNTPVMKRIQAFCRSNPLGKA 154
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1253.2047.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G244_ECTSI4.640e-10374.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YN51_9STRA5.280e-5156.95Flavinator of succinate dehydrogenase-domain-conta... [more]
A0A7S2R8F6_9STRA3.530e-4148.63Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A067CE16_SAPPC1.750e-3851.15Uncharacterized protein n=3 Tax=Saprolegnia TaxID=... [more]
A0A4D9CR24_9STRA8.320e-3848.63Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A1V9ZJH1_9STRA1.280e-3752.67Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A1V9YDJ8_9STRA1.740e-3754.40Uncharacterized protein (Fragment) n=1 Tax=Thraust... [more]
A0A7S4EEB6_9STRA9.390e-3650.00Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A2P4XKW9_9STRA8.530e-3449.62Succinate dehydrogenase subunit Emi5 n=1 Tax=Phyto... [more]
A0A6G0XII7_9STRA1.700e-3350.83Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1253contigL-elsbetiae_contig1253:6773..11317 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score310.5
Seed ortholog evalue6.3e-82
Seed eggNOG ortholog2880.D7G244
Preferred nameSDHAF2
KEGG koko:K18168,ko:K20352
KEGG TC9.B.188
Hectar predicted targeting categorymitochondrion
GOsGO:0000003,GO:0003006,GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006119,GO:0006121,GO:0006139,GO:0006163,GO:0006355,GO:0006357,GO:0006464,GO:0006470,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007005,GO:0007049,GO:0008150,GO:0008152,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009653,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010646,GO:0010648,GO:0010717,GO:0010719,GO:0015980,GO:0016043,GO:0016310,GO:0016311,GO:0016999,GO:0017144,GO:0018065,GO:0018293,GO:0019219,GO:0019222,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0019953,GO:0022402,GO:0022413,GO:0022414,GO:0022607,GO:0022900,GO:0022904,GO:0023051,GO:0023057,GO:0030111,GO:0030154,GO:0030178,GO:0030435,GO:0030437,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032502,GO:0032505,GO:0033108,GO:0034293,GO:0034552,GO:0034553,GO:0034622,GO:0034641,GO:0036211,GO:0042592,GO:0042773,GO:0042775,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043436,GO:0043933,GO:0043934,GO:0043935,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045333,GO:0045595,GO:0045596,GO:0045893,GO:0045935,GO:0045944,GO:0046034,GO:0046483,GO:0046872,GO:0046914,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048646,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0051093,GO:0051171,GO:0051173,GO:0051239,GO:0051241,GO:0051252,GO:0051254,GO:0051321,GO:0051704,GO:0055065,GO:0055070,GO:0055076,GO:0055080,GO:0055086,GO:0055114,GO:0060255,GO:0060828,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0072350,GO:0072521,GO:0080090,GO:0090090,GO:0098771,GO:1901135,GO:1901360,GO:1901564,GO:1902680,GO:1903046,GO:1903506,GO:1903508,GO:2000026,GO:2000112,GO:2001141
EggNOG free text desc.protein-FAD linkage
EggNOG OGsCOG2938@1,KOG3326@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000,ko03029,ko04131
Ec32 ortholog descriptionFlavinator of succinate dehydrogenase
Ec32 orthologEc-09_003830.1
Exons4
Model size700
Cds size645
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1253.2047.1prot_L-elsbetiae_contig1253.2047.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1253 6828..11317 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815446.4824111-UTR-L-elsbetiae_contig1253:6772..68271622815446.4824111-UTR-L-elsbetiae_contig1253:6772..6827Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1253 6773..6827 +
1691682902.1524255-UTR-L-elsbetiae_contig1253:6772..68271691682902.1524255-UTR-L-elsbetiae_contig1253:6772..6827Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1253 6773..6827 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815446.493927-CDS-L-elsbetiae_contig1253:6827..70491622815446.493927-CDS-L-elsbetiae_contig1253:6827..7049Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1253 6828..7049 +
1691682902.1678758-CDS-L-elsbetiae_contig1253:6827..70491691682902.1678758-CDS-L-elsbetiae_contig1253:6827..7049Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1253 6828..7049 +
1622815446.508976-CDS-L-elsbetiae_contig1253:9219..93941622815446.508976-CDS-L-elsbetiae_contig1253:9219..9394Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1253 9220..9394 +
1691682902.1768532-CDS-L-elsbetiae_contig1253:9219..93941691682902.1768532-CDS-L-elsbetiae_contig1253:9219..9394Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1253 9220..9394 +
1622815446.5212533-CDS-L-elsbetiae_contig1253:10226..103961622815446.5212533-CDS-L-elsbetiae_contig1253:10226..10396Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1253 10227..10396 +
1691682902.1845791-CDS-L-elsbetiae_contig1253:10226..103961691682902.1845791-CDS-L-elsbetiae_contig1253:10226..10396Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1253 10227..10396 +
1622815446.5320714-CDS-L-elsbetiae_contig1253:11239..113171622815446.5320714-CDS-L-elsbetiae_contig1253:11239..11317Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1253 11240..11317 +
1691682902.1922808-CDS-L-elsbetiae_contig1253:11239..113171691682902.1922808-CDS-L-elsbetiae_contig1253:11239..11317Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1253 11240..11317 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1253.2047.1

>prot_L-elsbetiae_contig1253.2047.1 ID=prot_L-elsbetiae_contig1253.2047.1|Name=mRNA_L-elsbetiae_contig1253.2047.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=215bp
MMQGARSIVAQLARKPAAIGAAFEKRSVARCGSECCRRHFSSSSGGGGIA
TEWQGERQPGSGGDELQRGLSPEEVLRVGARTQEMWKDHVALTTEFPDAS
LPPGGDDSVVSPDAVRRKRLVYRSKQRGWLEANLLLGTWAEKNVAGLSGS
EMDSYEDILNLETVDIFNFIAGNAEPPAFVDTPMMARLQAYVKSNPLGQS
PASYASAKRESNLT*
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mRNA from alignment at L-elsbetiae_contig1253:6773..11317+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1253.2047.1 ID=mRNA_L-elsbetiae_contig1253.2047.1|Name=mRNA_L-elsbetiae_contig1253.2047.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4545bp|location=Sequence derived from alignment at L-elsbetiae_contig1253:6773..11317+ (Laminarionema elsbetiae ELsaHSoW15)
GCAACGTGTAGCGGTAGATACACCTCCCACGCGTAGACGCGTGAAAGGGT
AGATCATGATGCAAGGGGCAAGGTCAATCGTTGCTCAGTTGGCCAGAAAA
CCGGCAGCGATCGGCGCGGCTTTCGAGAAACGAAGCGTCGCCCGATGCGG
GTCCGAGTGTTGCAGGCGACACTTCAGTAGCAGCAGCGGCGGCGGCGGCA
TTGCTACGGAATGGCAGGGGGAAAGGCAGCCAGGCTCCGGAGGAGATGAG
CTGCAACGGGGCCTCAGCCCAGAGGAGGTACGGAAGTGTTGTTGGAGATG
TTTGCGGGAGGGGGGTGAAGTGTTTGTTCCGCTTTGGGTGATCTGACTCA
AAGCGCCCAGCAGCGACAACTGACTGCTGCATGTCAGGTTCCGAGCGCAC
AGCACAGTCTACTTGGCGGCGTACAGTCGACGCAAAGTATATACGCTTCA
CATCAGCAACTTGCACAGGAAGAGCACATACCCTATACAACGTTACAGAC
ACTTACAGCAGTGCGACGACGGCGTGACAAGGTGTACATAAATGGTCCAC
CTCTGATGAGGCAGCAGTACTACAAACAGCAGTTAGTGAAACTTGCGCTC
GTTCGGAGTAATATGGAGTACTAGTATTGAACTGGTAATGAGCACTAGAC
CTTCCGCACGAGCGATATGAAGTAGATTCCCAAGCCCGGTTGACTTGCAT
GCGTGGGTCTTCATCGTTGCCACTCAGTTCGTTTTGTCATGTACCATATC
ATACGTACGTACGGTAGATACCATACCCGCCGCTTTTCCCCGACTGGCCG
GCGAGAAACCGGCGCGGAACCCCCCGGCTTTGTTGGGGTACCAAGACAGT
GATGTTGGCTGTTCCAGTTTTGTTTTACCTCGCTAGCGTGTAGAGGAGAG
CGAAGGTGTCCAGATTCGATATCTGTTTTATTATTGCTTTGCTGGCCCTT
CGAGTCCATTTATTTTTCGTGTACCTTGTCTTGGGAGTATAAGTTAAAAG
CTGAAAAGCTCGTGAGTATGAAGTACCAAACTTGCAAACTTGGACGTAAT
CACGTTGACGAGGGAAAGGGACAGCTGAACCCTTCTCGCGATAAAACCCA
AGGCAAGAACCGCAGGAGGAAGGTGGGGCAAAAAAATAAAATAAAAAAGA
AGAAGAAGCCCCAGTGTTCACCTCCTCCTGTGTGACCCCGGTTCGTTCTA
GTTGTCCAGACAAATGCACTGCAAAGTGTAGTACCTCTAAGTACACCGCA
AGGTGTAGTACACGTCTTCACTTGGGGGGACTGTGGGGACTGTCGCCAAA
ATAAAAGGGAAGGACACACACACACACACACACACACACATACACACACA
CACACAAGTTAGCCTGTGACCACGGGAATTGACCGCATCAAGTGTTGGAT
TAGTACGGACATTGAGAGGTACTGGATGGAGAGATCGGAACGGTTTTTAA
TGTGAAGACAACATACATCAATACATACATAGCTATTTGTTCACTTGACT
TCAAGCAGTGCACGCATATTGTAGCAAGACACGTTTACTTTGGCCCGCAG
AGCCTCCCTGTGTCATCGACAACAACAACAACAACAACAACAACAAGCTA
TTTCCTCACTTGAATTCCGGCAGTGCATGCGTAGCAAGACACGTTTACCT
TGGCCCGGAGAGCCTCCCTGTGTTATCGGTCCCCGCTGGAAGGTGCGCGT
GCTACCCAACGCCATCACGAACTTGCGAGCAGTTCTTGGTGTTTATTGTT
TTGGTTTTAATTAGTGTATACATACAAAATGTCAGCAGTCTACGTTCGGT
CTGTGAAATATCGTTCCAGAGGGATTTGTGCTGTTTTTTCGTTTTTTGAT
CTTCACATCTATTGCCAGAGCACTATTTAGAGGCCCTCCTTGCCACGAAG
TATATTTTTGCCAGAGTACTGAACCGTTGCTTGGTTTCAGAAATTGCTGC
CGGCGCATCCTTCCCCCTCCCCTCGCCTCAAGCCTGCCTGCCTACCTACC
TGTCCGACTCTAGATACAAACATATTTTCCGGGGGCTGAAAACAAAACAA
GTAAATCTCACGGAGTCCCTTCTCAATGTGGGTTAGGTTCCATTTTTGAT
GGACTGCTGTGTCTCTTTCAAAACGCCTGCTCTGAAATCCTCCCCCGGTG
TGCGCTCTCACAAAGGTCTCAACAAACGGCGGGTGCACCCCAAACGCCGC
GCGTATCGTAGGTGATGACGGGGTTTCGGATGCGGCGTGTATCCAGCAGC
AGTATTACCGCATAAATATGCACCCGTCCATGTAGCCCTTCGCCGTGTGC
ATCGTCCACGCTGCGGAAGCTAATGCAGCCACCCAATCTAACCAACCCAC
GACCAGCCGCAACCACAACCACGGCTGCTGCTGCTGCTAAATGCGTTTTC
ACGTCGCCCAAATACCTCTACCCCCCCCCCCCCGACCTCCAAGCCAGGTG
TTGCGGGTGGGCGCGCGGACGCAAGAAATGTGGAAGGATCACGTGGCCCT
CACCACGGAATTCCCGGACGCGAGTCTCCCCCCGGGAGGGGATGATTCTG
TGGTGTCCCCTGACGCCGTGCGGCGAAAGCGGCTTGTCTACCGAAGCAAG
CAGCGGGGGTGGCTCGAGGCGAGTTTGGTTGAACAACGCGCGCGTTTTTT
ATTTTTATTGATTTTTCAATCCGTATCTGTCTCTACAGTAAGTAGTACTG
TGTGGTGTGGGCCTTGAGCTCTTTTGAGCAAGCCTGGTCCCTTGAGTTGG
AAAGGAAAATACCCCCGCGTCCTGCATCCATACATACGCGAGCACGGCTT
CGCTTCTACTGTTTTAGCCAGATCAGGTCTCGTGCACAAGCATTACAGCA
GAAAACTCTCGTGGCGGCTGAATACCAGCTTGTTTCTGACCCACGGACGA
GTCTTAGAACAGCAGCAGCACGAGTCTGGATAAATAACAACGATGAGCAG
CCGTGACACAGATAGACAGGCAGACAGACAGACGATCATGCTTCTGTTCT
CCATACACATCGACCGACTAGGCCCTGGCTTGACATGCACACGTTTCGGC
CCTAGTTTAGTGCAATTGATTGGTCTTGCTTATGCGAGATTTTTTCAAAA
AACGTCATTTATGCACGTTGTTTGTTCATGCCCAGAAACGGGATTAATGC
TCACCATATTCCCAATTTTTGTGCATAAATAAGCGCACAGCTCGGCCTTA
TGTTCTCTTCTGTTCATGCTCAAAAAGCCCATTTATGCACTACTATTTAC
TGCTGTGCATATCAAGTCAGGGCCTACGACGGACCCGAATCAGCAACCAA
GGCACAAAACAGCGGCAGTTTTGCCTGCCGAGACTATCGCAAAGCTCGCT
GTTTACACGTTCGGCCCGTGAGATGAAAACCCGAAAAAGAGCCGCCCGGC
TGCTTGCCTTATTACTAACACTGGCCTCCTGTGCCCCGTCGGCGCCTCAG
GTAGACCTGTTGCTTGGGACCTGGGCGGAGAAGAACGTGGCGGGACTGTC
GGGATCGGAGATGGACAGCTACGAGGACATCCTCAACCTCGAGACCGTGG
ACATCTTCAACTTCATCGCTGGGAACGCGGAGCCCCCGGCCTTCGTCGAC
ACGCCCATGATGGCGCGTCTACAGGTATTTACGTCTGAGCTTTGTGGTTT
TGAAAGGGACTACTGTTGCGGTTTGAAAGGGACTGCAACATATCCTACAT
ATGGATGTTTGTATGTTGTTGTTTCTTCACGTTAATTTAGCTCGTACAAT
CGAGATCGCTATTTCCAAAAATCTAGCAACTCACGGCCAGTGGTCACAAG
AATATAGAAGTAAGTATGTATGTATGCAGTGGCACGTATTTTATGTATTT
CGCGATTGAGATTGCTGTCTGTTTTTGATTGTGCATGAGCGGCGGTGAGA
AGATGAGAAAACAAGATAGTTTTTTCAGCCTTTCAAGATTTTTTAACTCA
CTATGCACCGCGGACAATCTAACCTCTCGCGACAGCGACAGCAGCGGCTC
GGTTGGGATCGGATGGGTGGGGGTCGTCGTGGGTGTTTCGGCAGTATGTA
GTACTACATATGCTTGCGATATGTCTCTACCGGTTGGTCTACGCGGACGG
CACAAGAGTTGTATCAGCTGACACTCTGCATGCCATGCGTACGTATCCGG
TGGCTGTTTCCGGCAAGCCTTGCAAGTTCTCTTCGTATGTGACTATGTGC
ATGTACCTTTCGCGAGTTCCTGTGATATTTCGAGCAAGCTGCCTATCTCA
TCCAGCACTCTTTGCGTTTTGTACCGCTGTTCTTTCTTTTCAGTAATTCT
GGTGCAAGAAAAGACTGGCCTTGGAAGGAAACAAGAGTGTCGTTTCCTTA
GCAACTACATGCCTCCTTGTATATCCTCCTTGTATGGAGCACCTAGCACC
CCCCCCCCCAAAAAAAAAAACCCTCCTCACACGCGAACTATGTACGCACG
TCCCGTCGATTTCCCAGGCATACGTCAAGTCTAACCCGCTGGGCCAATCG
CCTGCGAGCTACGCTTCCGCCAAGCGCGAGAGCAACCTCACCTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1253:6773..11317+

>mRNA_L-elsbetiae_contig1253.2047.1 ID=mRNA_L-elsbetiae_contig1253.2047.1|Name=mRNA_L-elsbetiae_contig1253.2047.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1290bp|location=Sequence derived from alignment at L-elsbetiae_contig1253:6773..11317+ (Laminarionema elsbetiae ELsaHSoW15)
ATGATGCAAGGGGCAAGGTCAATCGTTGCTCAGTTGGCCAGAAAACCGGC
AGCGATCGGCGCGGCTTTCGAGAAACGAAGCGTCGCCCGATGCGGGTCCG
AGTGTTGCAGGCGACACTTCAGTAGCAGCAGCGGCGGCGGCGGCATTGCT
ACGGAATGGCAGGGGGAAAGGCAGCCAGGCTCCGGAGGAGATGAGCTGCA
ACGGGGCCTCAGCCCAGAGGAGATGATGCAAGGGGCAAGGTCAATCGTTG
CTCAGTTGGCCAGAAAACCGGCAGCGATCGGCGCGGCTTTCGAGAAACGA
AGCGTCGCCCGATGCGGGTCCGAGTGTTGCAGGCGACACTTCAGTAGCAG
CAGCGGCGGCGGCGGCATTGCTACGGAATGGCAGGGGGAAAGGCAGCCAG
GCTCCGGAGGAGATGAGCTGCAACGGGGCCTCAGCCCAGAGGAGGTGTTG
CGGGTGGGCGCGCGGACGCAAGAAATGTGGAAGGATCACGTGGCCCTCAC
CACGGAATTCCCGGACGCGAGTCTCCCCCCGGGAGGGGATGATTCTGTGG
TGTCCCCTGACGCCGTGCGGCGAAAGCGGCTTGTCTACCGAAGCAAGCAG
CGGGGGTGGCTCGAGGCGAGTGTTGCGGGTGGGCGCGCGGACGCAAGAAA
TGTGGAAGGATCACGTGGCCCTCACCACGGAATTCCCGGACGCGAGTCTC
CCCCCGGGAGGGGATGATTCTGTGGTGTCCCCTGACGCCGTGCGGCGAAA
GCGGCTTGTCTACCGAAGCAAGCAGCGGGGGTGGCTCGAGGCGAACCTGT
TGCTTGGGACCTGGGCGGAGAAGAACGTGGCGGGACTGTCGGGATCGGAG
ATGGACAGCTACGAGGACATCCTCAACCTCGAGACCGTGGACATCTTCAA
CTTCATCGCTGGGAACGCGGAGCCCCCGGCCTTCGTCGACACGCCCATGA
TGGCGCGTCTACAGACCTGTTGCTTGGGACCTGGGCGGAGAAGAACGTGG
CGGGACTGTCGGGATCGGAGATGGACAGCTACGAGGACATCCTCAACCTC
GAGACCGTGGACATCTTCAACTTCATCGCTGGGAACGCGGAGCCCCCGGC
CTTCGTCGACACGCCCATGATGGCGCGTCTACAGGCATACGTCAAGTCTA
ACCCGCTGGGCCAATCGCCTGCGAGCTACGCTTCCGCCAAGCGCGAGAGC
AACCTCACCTGAGCATACGTCAAGTCTAACCCGCTGGGCCAATCGCCTGC
GAGCTACGCTTCCGCCAAGCGCGAGAGCAACCTCACCTGA
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