prot_L-elsbetiae_contig1253.2046.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig1253.2046.1
Unique Name	prot_L-elsbetiae_contig1253.2046.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	111

Homology

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BLAST of mRNA_L-elsbetiae_contig1253.2046.1 vs. uniprot
Match: D7G245_ECTSI (Rab18, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G245_ECTSI)

HSP 1 Score: 182 bits (461), Expect = 3.610e-56
Identity = 92/111 (82.88%), Postives = 93/111 (83.78%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLGEAHTLRVVYRYMYICTWLYDVTRPETFDNLSKWLEEVETYHPGRGREV 111
            MLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIML                  +YDVTRPETFDNLSKWLEEVETYHPGRGREV
Sbjct:   29 MLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIML------------------VYDVTRPETFDNLSKWLEEVETYHPGRGREV 121

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BLAST of mRNA_L-elsbetiae_contig1253.2046.1 vs. uniprot
Match: A0A835YPZ0_9STRA (Rab18, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPZ0_9STRA)

HSP 1 Score: 164 bits (415), Expect = 3.250e-49
Identity = 82/111 (73.87%), Postives = 89/111 (80.18%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLGEAHTLRVVYRYMYICTWLYDVTRPETFDNLSKWLEEVETYHPGRGREV 111
            MLRFTDD+FDD LQSTIGVDFKVKM++ G K+IKMTIWDTAGQERFRTLTSSYYRGAQGIML                  +YDV RPETFDNL+KWLEEVETYHPGRGR+V
Sbjct:   27 MLRFTDDSFDDKLQSTIGVDFKVKMMEVGDKKIKMTIWDTAGQERFRTLTSSYYRGAQGIML------------------VYDVERPETFDNLNKWLEEVETYHPGRGRDV 119

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BLAST of mRNA_L-elsbetiae_contig1253.2046.1 vs. uniprot
Match: A0A067C8B0_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C8B0_SAPPC)

HSP 1 Score: 149 bits (376), Expect = 2.890e-43
Identity = 75/111 (67.57%), Postives = 82/111 (73.87%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLGEAHTLRVVYRYMYICTWLYDVTRPETFDNLSKWLEEVETYHPGRGREV 111
            +LRFTDDTFDDHLQSTIGVDFKVKM+   GKRIKMTIWDTAGQERFRTLTSSYYRGAQGI+L                  +YDV R ETF+NL  WL+EVE Y P  GR+V
Sbjct:   29 LLRFTDDTFDDHLQSTIGVDFKVKMMQVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIIL------------------VYDVARKETFENLGTWLQEVEVYSPANGRDV 121

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BLAST of mRNA_L-elsbetiae_contig1253.2046.1 vs. uniprot
Match: A0A485LUC0_9STRA (Aste57867_25090 protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LUC0_9STRA)

HSP 1 Score: 145 bits (366), Expect = 8.910e-42
Identity = 72/111 (64.86%), Postives = 82/111 (73.87%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLGEAHTLRVVYRYMYICTWLYDVTRPETFDNLSKWLEEVETYHPGRGREV 111
            +LRFT+DTFDDHLQSTIGVDFKVKM+   GKRIKMTIWDTAGQERFRTLTSSYYRGAQGI+L                  +YDV R +TF+NL  WL+EV+ Y P  GR+V
Sbjct:   29 LLRFTEDTFDDHLQSTIGVDFKVKMITVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIVL------------------VYDVARRDTFENLDTWLQEVQVYSPANGRDV 121

[Close]

BLAST of mRNA_L-elsbetiae_contig1253.2046.1 vs. uniprot
Match: A0A024TX33_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TX33_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.930e-41
Identity = 73/111 (65.77%), Postives = 81/111 (72.97%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLGEAHTLRVVYRYMYICTWLYDVTRPETFDNLSKWLEEVETYHPGRGREV 111
            +LRFT+DTFDDHLQSTIGVDFKVKM+   GKRIKMTIWDTAGQERFRTLTSSYYRGAQGI+L                  +YDV R +TF NL  WL+EVE Y P  GR+V
Sbjct:   46 LLRFTEDTFDDHLQSTIGVDFKVKMITVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIVL------------------VYDVARRDTFANLDTWLQEVEVYSPANGRDV 138

[Close]

BLAST of mRNA_L-elsbetiae_contig1253.2046.1 vs. uniprot
Match: D0NMU9_PHYIT (Rab18 family GTPase, putative n=6 Tax=Oomycota TaxID=4762 RepID=D0NMU9_PHYIT)

HSP 1 Score: 142 bits (359), Expect = 8.370e-41
Identity = 72/111 (64.86%), Postives = 82/111 (73.87%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLGEAHTLRVVYRYMYICTWLYDVTRPETFDNLSKWLEEVETYHPGRGREV 111
            +LRFTDDTFDD+LQSTIGVDFKVKM+   GK+IKMTIWDTAGQERFRTLTSSYYRGAQGI+L                  +YDV R +TF+NL  WL+EVE Y P  GR+V
Sbjct:   24 LLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVL------------------VYDVARRDTFENLDLWLQEVEVYSPAGGRDV 116

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BLAST of mRNA_L-elsbetiae_contig1253.2046.1 vs. uniprot
Match: K3WMM1_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WMM1_GLOUD)

HSP 1 Score: 142 bits (359), Expect = 8.610e-41
Identity = 72/111 (64.86%), Postives = 82/111 (73.87%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLGEAHTLRVVYRYMYICTWLYDVTRPETFDNLSKWLEEVETYHPGRGREV 111
            +LRFTDDTFDD+LQSTIGVDFKVKM+   GKRIKMTIWDTAGQERFRTLTSSYYRGAQGI+L                  +YDV R +TF+NL  WL+EVE Y P  G++V
Sbjct:   24 LLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIVL------------------VYDVARRDTFENLDLWLQEVEVYSPAGGKDV 116

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BLAST of mRNA_L-elsbetiae_contig1253.2046.1 vs. uniprot
Match: W2NT60_PHYPR (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2NT60_PHYPR)

HSP 1 Score: 142 bits (359), Expect = 9.120e-41
Identity = 72/111 (64.86%), Postives = 82/111 (73.87%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLGEAHTLRVVYRYMYICTWLYDVTRPETFDNLSKWLEEVETYHPGRGREV 111
            +LRFTDDTFDD+LQSTIGVDFKVKM+   GK+IKMTIWDTAGQERFRTLTSSYYRGAQGI+L                  +YDV R +TF+NL  WL+EVE Y P  GR+V
Sbjct:   45 LLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVL------------------VYDVARRDTFENLDLWLQEVEVYSPAGGRDV 137

[Close]

BLAST of mRNA_L-elsbetiae_contig1253.2046.1 vs. uniprot
Match: A0A6A3N672_9STRA (Uncharacterized protein n=21 Tax=Peronosporaceae TaxID=4777 RepID=A0A6A3N672_9STRA)

HSP 1 Score: 142 bits (359), Expect = 2.540e-40
Identity = 72/111 (64.86%), Postives = 82/111 (73.87%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLGEAHTLRVVYRYMYICTWLYDVTRPETFDNLSKWLEEVETYHPGRGREV 111
            +LRFTDDTFDD+LQSTIGVDFKVKM+   GK+IKMTIWDTAGQERFRTLTSSYYRGAQGI+L                  +YDV R +TF+NL  WL+EVE Y P  GR+V
Sbjct:   64 LLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVL------------------VYDVARRDTFENLDLWLQEVEVYSPAGGRDV 156

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BLAST of mRNA_L-elsbetiae_contig1253.2046.1 vs. uniprot
Match: A0A662YCX1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YCX1_9STRA)

HSP 1 Score: 142 bits (359), Expect = 3.140e-40
Identity = 72/111 (64.86%), Postives = 82/111 (73.87%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLGEAHTLRVVYRYMYICTWLYDVTRPETFDNLSKWLEEVETYHPGRGREV 111
            +LRFTDDTFDD+LQSTIGVDFKVKM+   GK+IKMTIWDTAGQERFRTLTSSYYRGAQGI+L                  +YDV R +TF+NL  WL+EVE Y P  GR+V
Sbjct:    2 LLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVL------------------VYDVARRDTFENLDLWLQEVEVYSPAGGRDV 94

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1253.2046.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1253.2046.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G245_ECTSI	3.610e-56	82.88	Rab18, RAB family GTPase n=2 Tax=Ectocarpus TaxID=...	[more]
A0A835YPZ0_9STRA	3.250e-49	73.87	Rab18, rab family GTPase n=1 Tax=Tribonema minus T...	[more]
A0A067C8B0_SAPPC	2.890e-43	67.57	Uncharacterized protein n=4 Tax=Saprolegniaceae Ta...	[more]
A0A485LUC0_9STRA	8.910e-42	64.86	Aste57867_25090 protein n=2 Tax=Aphanomyces TaxID=...	[more]
A0A024TX33_9STRA	1.930e-41	65.77	Uncharacterized protein n=2 Tax=Aphanomyces TaxID=...	[more]
D0NMU9_PHYIT	8.370e-41	64.86	Rab18 family GTPase, putative n=6 Tax=Oomycota Tax...	[more]
K3WMM1_GLOUD	8.610e-41	64.86	Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4...	[more]
W2NT60_PHYPR	9.120e-41	64.86	Uncharacterized protein n=14 Tax=Phytophthora TaxI...	[more]
A0A6A3N672_9STRA	2.540e-40	64.86	Uncharacterized protein n=21 Tax=Peronosporaceae T...	[more]
A0A662YCX1_9STRA	3.140e-40	64.86	Uncharacterized protein n=1 Tax=Nothophytophthora ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 8..24 score: 33.63 coord: 26..48 score: 49.25
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 1..111 e-value: 7.7E-13 score: 50.6
None	No IPR available	GENE3D	3.40.50.300		coord: 1..109 e-value: 6.0E-28 score: 99.5
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 1..67
None	No IPR available	PANTHER	PTHR24073:SF1064		coord: 1..67
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..111 score: 15.719
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 1..104 e-value: 2.3E-23 score: 82.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..104

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1253	contig	L-elsbetiae_contig1253:2248..4043 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1253.2046.1	mRNA_L-elsbetiae_contig1253.2046.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig1253 2248..4049 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig1253.2046.1 ID=prot_L-elsbetiae_contig1253.2046.1|Name=mRNA_L-elsbetiae_contig1253.2046.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=111bp
MLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLT
SSYYRGAQGIMLGEAHTLRVVYRYMYICTWLYDVTRPETFDNLSKWLEEV
ETYHPGRGREV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR027417	P-loop_NTPase