mRNA_L-elsbetiae_contig1253.2046.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1253.2046.1 vs. uniprot
Match: D7G245_ECTSI (Rab18, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G245_ECTSI) HSP 1 Score: 185 bits (469), Expect = 2.380e-57 Identity = 94/113 (83.19%), Postives = 95/113 (84.07%), Query Frame = 1 Query: 1 SIMLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLGEAHTLRVVYRYMYICTWLYDVTRPETFDNLSKWLEEVETYHPGRGREV 339 SIMLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIML +YDVTRPETFDNLSKWLEEVETYHPGRGREV Sbjct: 27 SIMLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIML------------------VYDVTRPETFDNLSKWLEEVETYHPGRGREV 121
BLAST of mRNA_L-elsbetiae_contig1253.2046.1 vs. uniprot
Match: A0A835YPZ0_9STRA (Rab18, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPZ0_9STRA) HSP 1 Score: 167 bits (423), Expect = 2.160e-50 Identity = 84/113 (74.34%), Postives = 91/113 (80.53%), Query Frame = 1 Query: 1 SIMLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLGEAHTLRVVYRYMYICTWLYDVTRPETFDNLSKWLEEVETYHPGRGREV 339 SIMLRFTDD+FDD LQSTIGVDFKVKM++ G K+IKMTIWDTAGQERFRTLTSSYYRGAQGIML +YDV RPETFDNL+KWLEEVETYHPGRGR+V Sbjct: 25 SIMLRFTDDSFDDKLQSTIGVDFKVKMMEVGDKKIKMTIWDTAGQERFRTLTSSYYRGAQGIML------------------VYDVERPETFDNLNKWLEEVETYHPGRGRDV 119
BLAST of mRNA_L-elsbetiae_contig1253.2046.1 vs. uniprot
Match: A0A067C8B0_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C8B0_SAPPC) HSP 1 Score: 151 bits (381), Expect = 5.480e-44 Identity = 76/113 (67.26%), Postives = 84/113 (74.34%), Query Frame = 1 Query: 1 SIMLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLGEAHTLRVVYRYMYICTWLYDVTRPETFDNLSKWLEEVETYHPGRGREV 339 S++LRFTDDTFDDHLQSTIGVDFKVKM+ GKRIKMTIWDTAGQERFRTLTSSYYRGAQGI+L +YDV R ETF+NL WL+EVE Y P GR+V Sbjct: 27 SMLLRFTDDTFDDHLQSTIGVDFKVKMMQVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIIL------------------VYDVARKETFENLGTWLQEVEVYSPANGRDV 121
BLAST of mRNA_L-elsbetiae_contig1253.2046.1 vs. uniprot
Match: A0A485LUC0_9STRA (Aste57867_25090 protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LUC0_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.690e-42 Identity = 73/113 (64.60%), Postives = 84/113 (74.34%), Query Frame = 1 Query: 1 SIMLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLGEAHTLRVVYRYMYICTWLYDVTRPETFDNLSKWLEEVETYHPGRGREV 339 S++LRFT+DTFDDHLQSTIGVDFKVKM+ GKRIKMTIWDTAGQERFRTLTSSYYRGAQGI+L +YDV R +TF+NL WL+EV+ Y P GR+V Sbjct: 27 SMLLRFTEDTFDDHLQSTIGVDFKVKMITVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIVL------------------VYDVARRDTFENLDTWLQEVQVYSPANGRDV 121
BLAST of mRNA_L-elsbetiae_contig1253.2046.1 vs. uniprot
Match: A0A024TX33_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TX33_9STRA) HSP 1 Score: 147 bits (370), Expect = 3.660e-42 Identity = 74/113 (65.49%), Postives = 83/113 (73.45%), Query Frame = 1 Query: 1 SIMLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLGEAHTLRVVYRYMYICTWLYDVTRPETFDNLSKWLEEVETYHPGRGREV 339 S++LRFT+DTFDDHLQSTIGVDFKVKM+ GKRIKMTIWDTAGQERFRTLTSSYYRGAQGI+L +YDV R +TF NL WL+EVE Y P GR+V Sbjct: 44 SMLLRFTEDTFDDHLQSTIGVDFKVKMITVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIVL------------------VYDVARRDTFANLDTWLQEVEVYSPANGRDV 138
BLAST of mRNA_L-elsbetiae_contig1253.2046.1 vs. uniprot
Match: D0NMU9_PHYIT (Rab18 family GTPase, putative n=6 Tax=Oomycota TaxID=4762 RepID=D0NMU9_PHYIT) HSP 1 Score: 144 bits (364), Expect = 1.590e-41 Identity = 73/113 (64.60%), Postives = 84/113 (74.34%), Query Frame = 1 Query: 1 SIMLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLGEAHTLRVVYRYMYICTWLYDVTRPETFDNLSKWLEEVETYHPGRGREV 339 S++LRFTDDTFDD+LQSTIGVDFKVKM+ GK+IKMTIWDTAGQERFRTLTSSYYRGAQGI+L +YDV R +TF+NL WL+EVE Y P GR+V Sbjct: 22 SMLLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVL------------------VYDVARRDTFENLDLWLQEVEVYSPAGGRDV 116
BLAST of mRNA_L-elsbetiae_contig1253.2046.1 vs. uniprot
Match: K3WMM1_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WMM1_GLOUD) HSP 1 Score: 144 bits (364), Expect = 1.630e-41 Identity = 73/113 (64.60%), Postives = 84/113 (74.34%), Query Frame = 1 Query: 1 SIMLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLGEAHTLRVVYRYMYICTWLYDVTRPETFDNLSKWLEEVETYHPGRGREV 339 S++LRFTDDTFDD+LQSTIGVDFKVKM+ GKRIKMTIWDTAGQERFRTLTSSYYRGAQGI+L +YDV R +TF+NL WL+EVE Y P G++V Sbjct: 22 SMLLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIVL------------------VYDVARRDTFENLDLWLQEVEVYSPAGGKDV 116
BLAST of mRNA_L-elsbetiae_contig1253.2046.1 vs. uniprot
Match: W2NT60_PHYPR (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2NT60_PHYPR) HSP 1 Score: 144 bits (364), Expect = 1.730e-41 Identity = 73/113 (64.60%), Postives = 84/113 (74.34%), Query Frame = 1 Query: 1 SIMLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLGEAHTLRVVYRYMYICTWLYDVTRPETFDNLSKWLEEVETYHPGRGREV 339 S++LRFTDDTFDD+LQSTIGVDFKVKM+ GK+IKMTIWDTAGQERFRTLTSSYYRGAQGI+L +YDV R +TF+NL WL+EVE Y P GR+V Sbjct: 43 SMLLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVL------------------VYDVARRDTFENLDLWLQEVEVYSPAGGRDV 137
BLAST of mRNA_L-elsbetiae_contig1253.2046.1 vs. uniprot
Match: A0A4D9D7L4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7L4_9STRA) HSP 1 Score: 144 bits (363), Expect = 2.590e-41 Identity = 73/113 (64.60%), Postives = 83/113 (73.45%), Query Frame = 1 Query: 1 SIMLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLGEAHTLRVVYRYMYICTWLYDVTRPETFDNLSKWLEEVETYHPGRGREV 339 SI+LRFTDD FDDH QSTIGVDFKVKM++ KRIKMTIWDTAGQERFRTLTSSYYRGAQGI+L +YDV R E+F+NL+ WL+EVE Y G GRE+ Sbjct: 27 SILLRFTDDAFDDHQQSTIGVDFKVKMIEVDHKRIKMTIWDTAGQERFRTLTSSYYRGAQGIIL------------------VYDVNRRESFENLNHWLQEVEVYSTGGGREI 121
BLAST of mRNA_L-elsbetiae_contig1253.2046.1 vs. uniprot
Match: A0A6A3N672_9STRA (Uncharacterized protein n=21 Tax=Peronosporaceae TaxID=4777 RepID=A0A6A3N672_9STRA) HSP 1 Score: 144 bits (364), Expect = 4.840e-41 Identity = 73/113 (64.60%), Postives = 84/113 (74.34%), Query Frame = 1 Query: 1 SIMLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLGEAHTLRVVYRYMYICTWLYDVTRPETFDNLSKWLEEVETYHPGRGREV 339 S++LRFTDDTFDD+LQSTIGVDFKVKM+ GK+IKMTIWDTAGQERFRTLTSSYYRGAQGI+L +YDV R +TF+NL WL+EVE Y P GR+V Sbjct: 62 SMLLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVL------------------VYDVARRDTFENLDLWLQEVEVYSPAGGRDV 156 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1253.2046.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1253.2046.1 >prot_L-elsbetiae_contig1253.2046.1 ID=prot_L-elsbetiae_contig1253.2046.1|Name=mRNA_L-elsbetiae_contig1253.2046.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=111bp MLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTback to top mRNA from alignment at L-elsbetiae_contig1253:2248..4049- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1253.2046.1 ID=mRNA_L-elsbetiae_contig1253.2046.1|Name=mRNA_L-elsbetiae_contig1253.2046.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1802bp|location=Sequence derived from alignment at L-elsbetiae_contig1253:2248..4049- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1253:2248..4049- >mRNA_L-elsbetiae_contig1253.2046.1 ID=mRNA_L-elsbetiae_contig1253.2046.1|Name=mRNA_L-elsbetiae_contig1253.2046.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=666bp|location=Sequence derived from alignment at L-elsbetiae_contig1253:2248..4049- (Laminarionema elsbetiae ELsaHSoW15)back to top |