prot_L-elsbetiae_contig1250.2034.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1250.2034.1
Unique Nameprot_L-elsbetiae_contig1250.2034.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length348
Homology
BLAST of mRNA_L-elsbetiae_contig1250.2034.1 vs. uniprot
Match: D7G7W8_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W8_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 9.920e-16
Identity = 54/136 (39.71%), Postives = 82/136 (60.29%), Query Frame = 0
Query:    1 MVDVVTIVEGVLSPLRRIRAAIKGATKIKEDLRQRYDDYSSVVEQVKSKPEVVAANRIEHELERLTKLFARVEILIQEYMAAPGDGKLRKFNIITKRAANREEVESELNEIDAEVMRQLATMNVKGAVSLSGMIPS 136
            M+  V+I+  ++ PLRR R A++GA  +K  +R+R DDY  VV Q +SK   ++  RIE E+ +L   F  +  LI++Y A+PGD  L +    T RA   +E+  EL  ID ++ RQLAT+ V G + LS  +P+
Sbjct:    1 MMGRVSILATLIDPLRRAREALQGAGDVKAAMRERLDDYERVVNQFESKLGSISDRRIEPEVTKLLVHFDEITALIRKYTASPGDSLLVRLRKKTDRARLHKELAEELERIDKDMQRQLATIQVLGMMELSNPLPT 136          
BLAST of mRNA_L-elsbetiae_contig1250.2034.1 vs. uniprot
Match: A0A6H5JSG2_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG2_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 1.410e-11
Identity = 49/136 (36.03%), Postives = 76/136 (55.88%), Query Frame = 0
Query:    1 MVDVVTIVEGVLSPLRRIRAAIKGATKIKEDLRQRYDDYSSVVEQVKSKPEVVAANRIEHELERLTKLFARVEILIQEYMAAPGDGKLRKFNIITKRAANREEVESELNEIDAEVMRQLATMNVKGAVSLSGMIPS 136
            M+  V+++  +  PL   R  ++GA  +K  +R+R DDY  VV Q  SK   ++  RIE E+ +L   F  +  L+++Y A+PGD  L +    T RA   +E+  EL  ID ++ RQLAT+ V G + LS   P+
Sbjct:    1 MMGRVSVLATLTDPLSSAREVLQGAGDVKAAMRERLDDYERVVNQFDSKLVSISDRRIEPEVTKLLIHFDEITALMRKYTASPGDSLLLRVRKKTDRARLHKELAEELECIDKDMQRQLATIQVLGMMELSDPFPT 136          
BLAST of mRNA_L-elsbetiae_contig1250.2034.1 vs. uniprot
Match: A0A6H5JAC1_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAC1_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 4.540e-11
Identity = 41/66 (62.12%), Postives = 48/66 (72.73%), Query Frame = 0
Query:  281 TVAIVGDTVKEDKWSEYKDDHGTPFYHNPAKPEETTWEKPKDFDKEKNAGEPPPPTKPKTKG-PKY 345
            TV IVGD  KEDKWSEY DD+G  +YHNP+K +ETT EKPKDFDK++    PP  T+ K K  PKY
Sbjct:   52 TVVIVGDECKEDKWSEYTDDNGKKYYHNPSK-DETTREKPKDFDKKEGKPAPPADTEKKEKKKPKY 116          
BLAST of mRNA_L-elsbetiae_contig1250.2034.1 vs. uniprot
Match: D7G840_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G840_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 5.490e-9
Identity = 34/47 (72.34%), Postives = 37/47 (78.72%), Query Frame = 0
Query:  281 TVAIVGDTVKEDKWSEYKDDHGTPFYHNPAKPEETTWEKPKDFDKEK 327
            TVAIVGD  KEDKWSEY DD+G  +Y NP K  ETT EKPKDFDK+K
Sbjct:   52 TVAIVGDKCKEDKWSEYTDDNGKKYYDNPFK-NETTREKPKDFDKKK 97          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1250.2034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G7W8_ECTSI9.920e-1639.71NB-ARC and TPR repeat-containig protein n=1 Tax=Ec... [more]
A0A6H5JSG2_9PHAE1.410e-1136.03AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JAC1_9PHAE4.540e-1162.12WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7G840_ECTSI5.490e-972.34WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 15..49
NoneNo IPR availableCOILSCoilCoilcoord: 101..121
NoneNo IPR availableCOILSCoilCoilcoord: 55..75
NoneNo IPR availableGENE3D2.20.70.10coord: 279..341
e-value: 2.7E-8
score: 35.2
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 293..323

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1250contigL-elsbetiae_contig1250:1292..2655 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1250.2034.1mRNA_L-elsbetiae_contig1250.2034.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1250 759..3646 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1250.2034.1 ID=prot_L-elsbetiae_contig1250.2034.1|Name=mRNA_L-elsbetiae_contig1250.2034.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=348bp
MVDVVTIVEGVLSPLRRIRAAIKGATKIKEDLRQRYDDYSSVVEQVKSKP
EVVAANRIEHELERLTKLFARVEILIQEYMAAPGDGKLRKFNIITKRAAN
REEVESELNEIDAEVMRQLATMNVKGAVSLSGMIPSLIKGLQFPSLEPIM
EILNEMRLQNAPAMAAAPAGVPKMSPSYVEQAGAFDPQMALAPFKAQSWD
RSTDQNGRPCWVNQNSRLACYSLVGEAGLPSTHYYRGGFPFTGAYSAPSM
TVAPMAMAPMGTMSMCMPLVAPAYTTATNNTVAIVGDTVKEDKWSEYKDD
HGTPFYHNPAKPEETTWEKPKDFDKEKNAGEPPPPTKPKTKGPKYKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036020WW_dom_sf