prot_L-elsbetiae_contig125.2029.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig125.2029.1
Unique Nameprot_L-elsbetiae_contig125.2029.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length51
Homology
BLAST of mRNA_L-elsbetiae_contig125.2029.1 vs. uniprot
Match: A0A6H5KEY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEY2_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 3.070e-22
Identity = 45/50 (90.00%), Postives = 48/50 (96.00%), Query Frame = 0
Query:    1 MADVMSSLMKHKHAGLFLSPVDPRTAPDYDKIVQTPMDLGTIDRKLRTGG 50
            MADVMSSLMKHKHAGLFL+PVDPRTAP Y+K VQTPMDLGTI+RKLRTGG
Sbjct:   63 MADVMSSLMKHKHAGLFLAPVDPRTAPGYEKYVQTPMDLGTINRKLRTGG 112          
BLAST of mRNA_L-elsbetiae_contig125.2029.1 vs. uniprot
Match: D8LBK0_ECTSI (Bromodomain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK0_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 7.800e-22
Identity = 44/50 (88.00%), Postives = 47/50 (94.00%), Query Frame = 0
Query:    1 MADVMSSLMKHKHAGLFLSPVDPRTAPDYDKIVQTPMDLGTIDRKLRTGG 50
            MADVMSSLMKHKHAGLFL+PVDPRTAP Y+K VQTPMDLGTIDRKL+ GG
Sbjct:   48 MADVMSSLMKHKHAGLFLAPVDPRTAPSYEKYVQTPMDLGTIDRKLQAGG 97          
BLAST of mRNA_L-elsbetiae_contig125.2029.1 vs. uniprot
Match: UPI00199EE4E6 (cat eye syndrome critical region protein 2 n=1 Tax=Silurus meridionalis TaxID=175797 RepID=UPI00199EE4E6)

HSP 1 Score: 57.8 bits (138), Expect = 2.040e-8
Identity = 27/46 (58.70%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    4 VMSSLMKHKHAGLFLSPVDPRTAPDYDKIVQTPMDLGTIDRKLRTG 49
            V+ SL  HK A  FL PVD   AP+Y +I+QTPMDL TI+RKL  G
Sbjct:  409 VLESLKAHKDAWPFLEPVDESYAPNYHEIIQTPMDLSTIERKLNEG 454          
BLAST of mRNA_L-elsbetiae_contig125.2029.1 vs. uniprot
Match: UPI001885C999 (cat eye syndrome critical region protein 2 isoform X1 n=5 Tax=Syngnathus acus TaxID=161584 RepID=UPI001885C999)

HSP 1 Score: 57.4 bits (137), Expect = 2.790e-8
Identity = 27/46 (58.70%), Postives = 31/46 (67.39%), Query Frame = 0
Query:    4 VMSSLMKHKHAGLFLSPVDPRTAPDYDKIVQTPMDLGTIDRKLRTG 49
            V+ +L  HK A  FL PVD   AP+Y  I+QTPMDL TIDRKL  G
Sbjct:  414 VLEALKAHKDAWPFLEPVDDSYAPNYHDIIQTPMDLSTIDRKLNDG 459          
BLAST of mRNA_L-elsbetiae_contig125.2029.1 vs. uniprot
Match: UPI001B3AB84F (cat eye syndrome critical region protein 2 homolog n=1 Tax=Toxotes jaculatrix TaxID=941984 RepID=UPI001B3AB84F)

HSP 1 Score: 57.0 bits (136), Expect = 3.820e-8
Identity = 26/46 (56.52%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    4 VMSSLMKHKHAGLFLSPVDPRTAPDYDKIVQTPMDLGTIDRKLRTG 49
            V+ +L  HK A  FL PVD   AP+Y +I+QTPMDL TI+RKL  G
Sbjct:  418 VLEALKSHKDAWPFLEPVDDSYAPNYHEIIQTPMDLSTIERKLNDG 463          
BLAST of mRNA_L-elsbetiae_contig125.2029.1 vs. uniprot
Match: A0A4W6C0Y5_LATCA (Bromo domain-containing protein n=1 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6C0Y5_LATCA)

HSP 1 Score: 56.6 bits (135), Expect = 5.210e-8
Identity = 26/46 (56.52%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    4 VMSSLMKHKHAGLFLSPVDPRTAPDYDKIVQTPMDLGTIDRKLRTG 49
            V+ +L  HK A  FL PVD   AP+Y +I+QTPMDL TI+RKL  G
Sbjct:  363 VLEALKAHKDAWPFLEPVDDSYAPNYHEIIQTPMDLSTIERKLNDG 408          
BLAST of mRNA_L-elsbetiae_contig125.2029.1 vs. uniprot
Match: A0A4W6C0Y0_LATCA (Bromo domain-containing protein n=2 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6C0Y0_LATCA)

HSP 1 Score: 56.6 bits (135), Expect = 5.220e-8
Identity = 26/46 (56.52%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    4 VMSSLMKHKHAGLFLSPVDPRTAPDYDKIVQTPMDLGTIDRKLRTG 49
            V+ +L  HK A  FL PVD   AP+Y +I+QTPMDL TI+RKL  G
Sbjct:  418 VLEALKAHKDAWPFLEPVDDSYAPNYHEIIQTPMDLSTIERKLNDG 463          
BLAST of mRNA_L-elsbetiae_contig125.2029.1 vs. uniprot
Match: A0A672ZNM4_9TELE (Bromo domain-containing protein n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A672ZNM4_9TELE)

HSP 1 Score: 56.6 bits (135), Expect = 5.220e-8
Identity = 26/46 (56.52%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    4 VMSSLMKHKHAGLFLSPVDPRTAPDYDKIVQTPMDLGTIDRKLRTG 49
            V+ +L  HK A  FL PVD   AP+Y +I+QTPMDL TI+RKL  G
Sbjct:  384 VLEALKAHKDAWPFLEPVDDSYAPNYHEIIQTPMDLSTIERKLNDG 429          
BLAST of mRNA_L-elsbetiae_contig125.2029.1 vs. uniprot
Match: A0A3S2PPG4_ORYJA (Bromo domain-containing protein n=1 Tax=Oryzias javanicus TaxID=123683 RepID=A0A3S2PPG4_ORYJA)

HSP 1 Score: 56.6 bits (135), Expect = 5.220e-8
Identity = 26/46 (56.52%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    4 VMSSLMKHKHAGLFLSPVDPRTAPDYDKIVQTPMDLGTIDRKLRTG 49
            V+ +L  HK A  FL PVD   AP+Y +I+QTPMDL TI+RKL  G
Sbjct:  414 VLEALKAHKDAWPFLEPVDDSYAPNYHEIIQTPMDLSTIERKLNDG 459          
BLAST of mRNA_L-elsbetiae_contig125.2029.1 vs. uniprot
Match: W5L0Y7_ASTMX (Cat eye syndrome critical region protein 2 n=3 Tax=Astyanax mexicanus TaxID=7994 RepID=W5L0Y7_ASTMX)

HSP 1 Score: 56.6 bits (135), Expect = 5.220e-8
Identity = 25/46 (54.35%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    4 VMSSLMKHKHAGLFLSPVDPRTAPDYDKIVQTPMDLGTIDRKLRTG 49
            V+ +L  HK A  FL PVD   AP+Y++I+QTPMDL TI++KL  G
Sbjct:  409 VLEALKSHKDAWPFLEPVDESYAPNYNEIIQTPMDLSTIEKKLNEG 454          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig125.2029.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KEY2_9PHAE3.070e-2290.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBK0_ECTSI7.800e-2288.00Bromodomain-containing protein n=1 Tax=Ectocarpus ... [more]
UPI00199EE4E62.040e-858.70cat eye syndrome critical region protein 2 n=1 Tax... [more]
UPI001885C9992.790e-858.70cat eye syndrome critical region protein 2 isoform... [more]
UPI001B3AB84F3.820e-856.52cat eye syndrome critical region protein 2 homolog... [more]
A0A4W6C0Y5_LATCA5.210e-856.52Bromo domain-containing protein n=1 Tax=Lates calc... [more]
A0A4W6C0Y0_LATCA5.220e-856.52Bromo domain-containing protein n=2 Tax=Lates calc... [more]
A0A672ZNM4_9TELE5.220e-856.52Bromo domain-containing protein n=1 Tax=Sphaeramia... [more]
A0A3S2PPG4_ORYJA5.220e-856.52Bromo domain-containing protein n=1 Tax=Oryzias ja... [more]
W5L0Y7_ASTMX5.220e-854.35Cat eye syndrome critical region protein 2 n=3 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 26..42
score: 52.56
coord: 12..25
score: 31.83
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 3..47
e-value: 1.8E-12
score: 47.1
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 9..50
score: 11.809
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 1..50
e-value: 6.4E-17
score: 63.5
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 3..49
NoneNo IPR availablePANTHERPTHR45926:SF5TRANSCRIPTION FACTOR GTE4coord: 3..49
NoneNo IPR availablePANTHERPTHR45926FAMILY NOT NAMEDcoord: 3..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig125contigL-elsbetiae_contig125:145..297 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig125.2029.1mRNA_L-elsbetiae_contig125.2029.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig125 145..300 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig125.2029.1 ID=prot_L-elsbetiae_contig125.2029.1|Name=mRNA_L-elsbetiae_contig125.2029.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=51bp
MADVMSSLMKHKHAGLFLSPVDPRTAPDYDKIVQTPMDLGTIDRKLRTGG
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf