prot_L-elsbetiae_contig12494.2027.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12494.2027.1
Unique Nameprot_L-elsbetiae_contig12494.2027.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length88
Homology
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BLAST of mRNA_L-elsbetiae_contig12494.2027.1 vs. uniprot
Match: D7FZ11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ11_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 5.820e-17
Identity = 50/85 (58.82%), Postives = 62/85 (72.94%), Query Frame = 0 
Query:    8 EDEDALGGGRTVEMEEIQEERVQAVIRYRDGLVEVLRAMLAMHLNPRRDEDDDEQRDEAREGRGAG-----LSQDGIEGVPRVLT 87
            EDE+   G RT+E+EEI EE+VQ V+RYRD LVEVLRAMLAMHL PRR++++         GRGA      +++DGIEGVPRVLT
Sbjct:  370 EDEENTLGDRTLEVEEITEEKVQEVVRYRDDLVEVLRAMLAMHLYPRRNDEEXXXXXXXXXGRGAARGGGAVTEDGIEGVPRVLT 454
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BLAST of mRNA_L-elsbetiae_contig12494.2027.1 vs. uniprot
Match: A0A6H5J7R4_9PHAE (SCD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R4_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 6.760e-13
Identity = 48/87 (55.17%), Postives = 57/87 (65.52%), Query Frame = 0 
Query:    7 EEDEDALGGGRTVEMEEIQEERVQAVIRYRDGLVEVLRAMLAMHLNPRRDEDDDEQRDEAREGRGA------GLSQDGIEGVPRVLT 87
            E++ED LG G T+E+EEI EE+VQ V+RYRD LVEVLRAMLAMHL PRRD                       +++DGIEGVPRVLT
Sbjct:  800 EDEEDTLGDG-TLEVEEITEEKVQEVVRYRDDLVEVLRAMLAMHLYPRRDXXXXXXXXXXXXXXXXXXXXXXAVAEDGIEGVPRVLT 885
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12494.2027.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZ11_ECTSI5.820e-1758.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7R4_9PHAE6.760e-1355.17SCD domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12494contigL-elsbetiae_contig12494:3675..4692 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12494.2027.1mRNA_L-elsbetiae_contig12494.2027.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12494 3675..4692 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12494.2027.1 ID=prot_L-elsbetiae_contig12494.2027.1|Name=mRNA_L-elsbetiae_contig12494.2027.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=88bp
SNEAGEEEDEDALGGGRTVEMEEIQEERVQAVIRYRDGLVEVLRAMLAMH
LNPRRDEDDDEQRDEAREGRGAGLSQDGIEGVPRVLTT
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